Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18406 Selenicereus undatus HOM05D005051 ORTHO05D005945 5.0e-34 147.1 70 100.0
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.4e-15 85.9 48 77.1
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 1.8e-15 85.5 48 79.2
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 6.7e-15 83.6 50 78.0
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 1.5e-14 82.4 48 75.0
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 2.0e-14 82.0 48 72.9
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 3.3e-14 81.3 50 74.0
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 7.4e-14 80.1 49 73.5
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 1.3e-13 79.3 49 71.4
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 1.7e-13 79.0 49 73.5
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 1.7e-13 79.0 49 73.5
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 1.7e-13 79.0 48 70.8
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 2.2e-13 78.6 50 74.0
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 2.2e-13 78.6 50 70.0
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 3.7e-13 77.8 49 69.4
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.8e-13 77.4 49 69.4
TWI18G1080 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 6.3e-13 77.0 50 70.0
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 1.1e-12 76.3 50 72.0
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 1.1e-12 76.3 48 68.8
Glyma.13G059866 Glycine max HOM05D005051 ORTHO05D005945 1.4e-12 75.9 49 69.4
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.4e-12 75.9 49 69.4
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 1.4e-12 75.9 50 70.0
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 1.4e-12 75.9 49 71.4
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 1.8e-12 75.5 48 68.8
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.8e-12 75.5 50 68.0
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 1.8e-12 75.5 50 70.0
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 2.4e-12 75.1 48 66.7
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 2.4e-12 75.1 50 68.0
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 3.1e-12 74.7 50 66.0
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 3.1e-12 74.7 50 66.0
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 3.1e-12 74.7 50 66.0
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 4.1e-12 74.3 48 68.8
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 4.1e-12 74.3 49 65.3
Glyma.13G182400 Glycine max HOM05D005051 ORTHO05D005945 5.3e-12 73.9 49 67.3
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 5.3e-12 73.9 48 66.7
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 5.3e-12 73.9 48 66.7
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 7.0e-12 73.6 50 64.0
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 7.0e-12 73.6 49 67.3
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 9.1e-12 73.2 49 65.3
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 9.1e-12 73.2 49 65.3
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 9.1e-12 73.2 48 64.6
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 1.6e-11 72.4 48 64.6
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 1.6e-11 72.4 50 64.0
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 1.6e-11 72.4 49 65.3
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 1.6e-11 72.4 50 62.0
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 1.6e-11 72.4 50 62.0
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 2.0e-11 72.0 48 64.6
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.6e-11 71.6 45 68.9
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.6e-11 71.6 50 64.0
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 2.6e-11 71.6 50 64.0
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 3.5e-11 71.2 45 68.9
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 68.0
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 64.0
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 68.0
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 68.0
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 64.0
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 3.5e-11 71.2 50 62.0
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 60.0
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 60.0
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 60.0
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 62.0
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 62.0
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 4.5e-11 70.9 50 62.0
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 5.9e-11 70.5 47 72.3
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 5.9e-11 70.5 50 62.0
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 5.9e-11 70.5 49 65.3
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 5.9e-11 70.5 48 68.8
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 7.7e-11 70.1 50 60.0
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 7.7e-11 70.1 50 62.0
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 7.7e-11 70.1 50 60.0
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 7.7e-11 70.1 37 75.7
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 1.0e-10 69.7 50 64.0
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 1.0e-10 69.7 49 67.3
QL09p053457 Quercus lobata HOM05D005051 ORTHO05D005945 1.0e-10 69.7 50 60.0
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 1.3e-10 69.3 49 65.3
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 1.3e-10 69.3 50 62.0
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 1.7e-10 68.9 50 62.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 2.2e-10 68.6 48 66.7
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 2.2e-10 68.6 50 66.0
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 2.2e-10 68.6 49 65.3
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 3.8e-10 67.8 49 63.3
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 3.8e-10 67.8 50 62.0
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 3.8e-10 67.8 50 58.0
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 6.5e-10 67.0 50 58.0
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 6.5e-10 67.0 50 58.0
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 6.5e-10 67.0 50 60.0
Glyma.13G196100 Glycine max HOM05D005051 ORTHO05D005945 6.5e-10 67.0 32 84.4
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 6.5e-10 67.0 50 58.0
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 8.5e-10 66.6 49 63.3
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 8.5e-10 66.6 49 63.3
Nitab4.5_0000345g0090 Nicotiana tabacum HOM05D005051 ORTHO05D000055 1.1e-09 66.2 50 62.0
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.5e-09 65.9 49 61.2
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 1.9e-09 65.5 50 60.0
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 3.2e-09 64.7 48 60.4
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 4.2e-09 64.3 50 56.0
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 4.2e-09 64.3 50 60.0
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 5.5e-09 63.9 49 61.2
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 7.2e-09 63.5 50 58.0
Os11g0479232 Oryza sativa ssp. japonica HOM05D005051 ORTHO05D005945 9.4e-09 63.2 34 76.5
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 9.4e-09 63.2 50 54.0
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 9.4e-09 63.2 50 56.0
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 9.4e-09 63.2 50 56.0
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 1.2e-08 62.8 49 55.1
HPP92_008216 Vanilla planifolia HOM05D005051 ORTHO05D005945 3.6e-08 61.2 51 56.9
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.5e-06 55.8 49 57.1
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 2.6e-06 55.1 31 71.0
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 4.4e-06 54.3 53 50.9
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 5.7e-06 53.9 65 41.5


User provided reference genes

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