Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18399 Selenicereus undatus HOM05D000026 ORTHO05D009413 3.7e-73 278.1 139 100.0
Hund09732 Selenicereus undatus HOM05D000026 ORTHO05D009413 2.8e-65 251.9 136 92.6
AUR62028107 Chenopodium quinoa HOM05D000026 ORTHO05D009413 3.2e-40 168.7 142 64.8
AUR62005959 Chenopodium quinoa HOM05D000026 ORTHO05D009413 1.6e-39 166.4 142 63.4
EL10Ac3g05144 Beta vulgaris HOM05D000026 ORTHO05D009413 1.1e-37 160.2 129 65.9
PGR042G2082 Punica granatum HOM05D000026 ORTHO05D009413 8.9e-27 124.0 112 57.1
Gohir.D04G000801 Gossypium hirsutum HOM05D000026 ORTHO05D009413 2.0e-26 122.9 130 50.8
Gorai.012G001800 Gossypium raimondii HOM05D000026 ORTHO05D009413 2.0e-26 122.9 130 50.8
Haze_00321 Corylus avellana HOM05D000026 ORTHO05D009413 5.8e-26 121.3 107 57.0
Gohir.A05G415401 Gossypium hirsutum HOM05D000026 ORTHO05D009413 9.9e-26 120.6 124 50.8
Cfa016140 Carpinus fangiana HOM05D000026 ORTHO05D009413 1.7e-25 119.8 105 56.2
FAN01G1521 Fragaria x ananassa HOM05D000026 ORTHO05D009413 2.2e-25 119.4 89 62.9
FAN03G3064 Fragaria x ananassa HOM05D000026 ORTHO05D009413 2.2e-25 119.4 110 55.5
FAN18G1074 Fragaria x ananassa HOM05D000026 ORTHO05D009413 2.2e-25 119.4 110 55.5
FAN10G0785 Fragaria x ananassa HOM05D000026 ORTHO05D009413 3.7e-25 118.6 110 55.5
FAN10G1249 Fragaria x ananassa HOM05D000026 ORTHO05D009413 3.7e-25 118.6 110 55.5
FAN03G3295 Fragaria x ananassa HOM05D000026 ORTHO05D009413 8.4e-25 117.5 110 55.5
FAN04G2363 Fragaria x ananassa HOM05D000026 ORTHO05D009413 8.4e-25 117.5 110 54.5
Duzib205G1149 Durio zibethinus HOM05D000026 ORTHO05D009413 1.9e-24 116.3 131 53.4
FvH4_7g33120 Fragaria vesca HOM05D000026 ORTHO05D009413 3.2e-24 115.5 110 54.5
Prupe.2G321100 Prunus persica HOM05D000026 ORTHO05D009413 3.2e-24 115.5 122 50.8
RcHm_v2.0_Chr1g0334661 Rosa chinensis HOM05D000026 ORTHO05D009413 4.1e-24 115.2 90 61.1
RcHm_v2.0_Chr1g0383191 Rosa chinensis HOM05D000026 ORTHO05D009413 4.1e-24 115.2 90 61.1
CiPaw.05G207900 Carya illinoinensis HOM05D000026 ORTHO05D009413 7.1e-24 114.4 123 48.0
Eucgr.A00972 Eucalyptus grandis HOM05D000026 ORTHO05D009413 7.1e-24 114.4 116 50.0
Phvul.008G188700 Phaseolus vulgaris HOM05D000026 ORTHO05D009413 7.1e-24 114.4 88 64.8
Medtr5g068770 Medicago truncatula HOM05D000026 ORTHO05D009413 1.6e-23 113.2 105 54.3
COL.COLO4_14390 Corchorus olitorius HOM05D000026 ORTHO05D009413 2.1e-23 112.8 92 62.0
FAN09G4069 Fragaria x ananassa HOM05D000026 ORTHO05D009413 2.1e-23 112.8 110 53.6
Glyma.14G189100 Glycine max HOM05D000026 ORTHO05D009413 3.5e-23 112.1 88 64.8
VMungo0647G0956 Vigna mungo HOM05D000026 ORTHO05D009413 3.5e-23 112.1 88 63.6
QL09p006160 Quercus lobata HOM05D000026 ORTHO05D009413 7.8e-23 110.9 105 53.3
Thecc.03G211200 Theobroma cacao HOM05D000026 ORTHO05D009413 1.0e-22 110.5 103 57.3
Sopen03g021780 Solanum pennellii HOM05D000026 ORTHO05D009413 1.3e-22 110.2 90 63.3
Sopen03g021790 Solanum pennellii HOM05D000026 ORTHO05D009413 1.3e-22 110.2 90 63.3
CANSAT21G0106 Cannabis sativa HOM05D000026 ORTHO05D009413 1.7e-22 109.8 99 57.6
Glyma.02G221900 Glycine max HOM05D000026 ORTHO05D009413 1.7e-22 109.8 88 62.5
Hma1.2p1_0138F.1_g062710 Hydrangea macrophylla HOM05D000026 ORTHO05D009413 3.0e-22 109.0 87 58.6
LjContig00155g0017282 Lotus japonicus HOM05D000026 ORTHO05D009413 3.0e-22 109.0 97 55.7
Ciclev10024051m.g Citrus clementina HOM05D000026 ORTHO05D009413 5.1e-22 108.2 99 58.6
Dinv17285 Davidia involucrata HOM05D002676 ORTHO05D009413 5.1e-22 108.2 104 57.7
TPR.G5838 Trifolium pratense HOM05D000026 ORTHO05D009413 5.1e-22 108.2 101 53.5
PGSC0003DMG400000578 Solanum tuberosum HOM05D000026 ORTHO05D009413 6.6e-22 107.8 126 50.0
Solyc03g080060.1 Solanum lycopersicum HOM05D000026 ORTHO05D009413 1.1e-21 107.1 90 60.0
CAN.G303.46 Capsicum annuum HOM05D000026 ORTHO05D009413 1.9e-21 106.3 136 50.0
MD01G1230400 Malus domestica HOM05D000026 ORTHO05D009413 1.9e-21 106.3 136 47.1
Nn3g18751 Nelumbo nucifera HOM05D000026 ORTHO05D009413 2.5e-21 105.9 133 47.4
arahy.Tifrunner.gnm1.ann1.U03MUX Arachis hypogaea HOM05D000026 ORTHO05D009413 4.3e-21 105.1 88 56.8
arahy.Tifrunner.gnm1.ann1.XEI4AF Arachis hypogaea HOM05D000026 ORTHO05D009413 4.3e-21 105.1 88 56.8
Peaxi162Scf01026g00023 Petunia axillaris HOM05D000026 ORTHO05D009413 5.6e-21 104.8 108 53.7
Nitab4.5_0000021g0120 Nicotiana tabacum HOM05D000026 ORTHO05D009413 9.6e-21 104.0 87 60.9
Ca_05535_v3 Cicer arietinum L. HOM05D000026 ORTHO05D009413 1.2e-20 103.6 97 55.7
Nitab4.5_0004582g0040 Nicotiana tabacum HOM05D000026 ORTHO05D009413 1.2e-20 103.6 107 53.3
Psat2g061480 Pisum sativum HOM05D000026 ORTHO05D009413 2.1e-20 102.8 88 56.8
Dinv39028 Davidia involucrata HOM05D000026 ORTHO05D009413 2.8e-20 102.4 117 47.0
Potri.015G004500 Populus trichocarpa HOM05D000026 ORTHO05D009413 2.8e-20 102.4 101 51.5
Rhsim03G0217500 Rhododendron simsii HOM05D000026 ORTHO05D009413 2.8e-20 102.4 94 57.4
TPR.G20768 Trifolium pratense HOM05D000026 ORTHO05D009413 3.6e-20 102.1 101 50.5
Sabra15G0003100 Salix brachista HOM05D000026 ORTHO05D009413 1.1e-19 100.5 102 49.0
Hma1.2p1_0115F.1_g055640 Hydrangea macrophylla HOM05D000026 ORTHO05D009413 4.0e-19 98.6 119 48.7
Actinidia08711 Actinidia chinensis HOM05D000026 ORTHO05D009413 6.8e-19 97.8 101 52.5
Cpa.g.sc3.175 Carica papaya HOM05D000026 ORTHO05D009413 8.9e-19 97.4 103 51.5
Actinidia08710 Actinidia chinensis HOM05D001768 ORTHO05D009413 1.2e-18 97.1 101 52.5
CSS0038180 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D009413 1.3e-17 93.6 95 53.7
Cfa012082 Carpinus fangiana HOM05D000026 ORTHO05D009413 1.3e-17 93.6 103 51.5
Lsat_1_v5_gn_8_24200 Lactuca sativa HOM05D000026 ORTHO05D009413 1.3e-17 93.6 111 49.5
vmacro06466 Vaccinium macrocarpon HOM05D000026 ORTHO05D009413 2.2e-17 92.8 85 56.5
Atru.chr12.2534 Acer truncatum HOM05D000026 ORTHO05D009413 8.4e-17 90.9 127 42.5
Atru.chr4.810 Acer truncatum HOM05D000026 ORTHO05D009413 8.4e-17 90.9 127 42.5
Eucgr.E00520 Eucalyptus grandis HOM05D000026 ORTHO05D009413 1.1e-16 90.5 107 47.7
COL.COLO4_23791 Corchorus olitorius HOM05D000026 ORTHO05D009413 3.2e-16 89.0 96 52.1
SEGI_41410 Sequoiadendron giganteum HOM05D000026 ORTHO05D009413 5.4e-16 88.2 108 49.1
Haze_08976 Corylus avellana HOM05D000026 ORTHO05D009413 1.2e-15 87.0 81 56.8
Migut.F00132 Erythranthe guttata HOM05D000026 ORTHO05D009413 1.2e-15 87.0 129 46.5
CiPaw.11G142400 Carya illinoinensis HOM05D000026 ORTHO05D009413 2.3e-14 82.8 107 45.8
Prupe.5G088200 Prunus persica HOM05D000026 ORTHO05D009413 3.0e-14 82.4 110 48.2
HanXRQChr08g0217271 Helianthus annuus HOM05D000026 ORTHO05D009413 3.9e-14 82.0 84 51.2
Lalb_Chr04g0252521 Lupinus albus HOM05D000026 ORTHO05D009413 1.1e-13 80.5 88 46.6
ATR0030G020 Amborella trichopoda HOM05D000026 ORTHO05D009413 1.5e-13 80.1 110 43.6
Ciclev10024559m.g Citrus clementina HOM05D000026 ORTHO05D009413 1.5e-13 80.1 100 46.0
SGA_v2.0_scaffold18G08486 Striga asiatica HOM05D000026 ORTHO05D009413 1.6e-12 76.6 86 48.8
Haze_25237 Corylus avellana HOM05D000026 ORTHO05D009413 2.8e-12 75.9 80 53.8
SEGI_05663 Sequoiadendron giganteum HOM05D000026 ORTHO05D009413 3.6e-12 75.5 111 40.5
SEGI_25931 Sequoiadendron giganteum HOM05D000026 ORTHO05D009413 3.6e-12 75.5 111 40.5
RcHm_v2.0_Chr7g0199741 Rosa chinensis HOM05D000026 ORTHO05D009413 4.8e-12 75.1 115 43.5
ECA233G6076 Erigeron canadensis HOM05D000026 ORTHO05D009413 2.6e-10 69.3 87 48.3
Atru.chr9.1509 Acer truncatum HOM05D000026 ORTHO05D009413 3.4e-10 68.9 63 61.9
Lalb_Chr10g0103051 Lupinus albus HOM05D000026 ORTHO05D009413 4.4e-10 68.6 54 57.4


User provided reference genes

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