Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 7.1e-108 394.0 213 100.0
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.2e-34 148.7 213 51.2
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 2.8e-32 142.9 219 48.9
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 2.4e-31 139.8 136 62.5
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.6e-30 137.1 142 59.2
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.7e-30 136.3 185 49.7
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 3.5e-30 136.0 165 56.4
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 4.5e-30 135.6 199 51.3
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 5.9e-30 135.2 211 48.3
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.0e-29 134.4 165 55.8
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 1.3e-29 134.0 193 51.3
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 2.9e-29 132.9 131 63.4
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 3.8e-29 132.5 203 48.3
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.8e-29 132.5 134 61.9
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 3.8e-29 132.5 191 51.3
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 6.6e-29 131.7 120 63.3
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 3.3e-28 129.4 200 48.0
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 4.3e-28 129.0 163 53.4
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 5.6e-28 128.6 211 46.0
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 5.6e-28 128.6 186 50.0
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 7.3e-28 128.3 173 52.0
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 7.3e-28 128.3 191 50.3
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 9.5e-28 127.9 126 59.5
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 1.6e-27 127.1 104 71.2
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.6e-27 127.1 170 50.6
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 2.1e-27 126.7 202 46.0
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 2.1e-27 126.7 127 63.8
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 4.7e-27 125.6 203 44.3
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 4.7e-27 125.6 155 51.6
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 4.7e-27 125.6 180 47.8
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 6.1e-27 125.2 90 73.3
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.1e-27 125.2 136 54.4
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 6.1e-27 125.2 186 46.8
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 8.0e-27 124.8 138 56.5
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 8.0e-27 124.8 176 52.8
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.0e-26 124.4 136 54.4
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.4e-26 124.0 150 51.3
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 1.8e-26 123.6 126 58.7
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 2.3e-26 123.2 141 52.5
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 2.3e-26 123.2 97 73.2
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 3.0e-26 122.9 117 63.2
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 3.0e-26 122.9 186 49.5
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 5.2e-26 122.1 146 52.7
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 1.2e-25 120.9 134 56.0
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 2.0e-25 120.2 153 52.9
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 2.0e-25 120.2 200 44.5
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 4.4e-25 119.0 90 72.2
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 4.4e-25 119.0 130 55.4
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.5e-25 118.2 97 70.1
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 7.5e-25 118.2 130 54.6
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 9.8e-25 117.9 107 65.4
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 9.8e-25 117.9 129 55.8
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.7e-24 117.1 178 48.3
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.7e-24 117.1 148 51.4
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.9e-24 116.3 169 50.3
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 3.7e-24 115.9 153 52.9
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 3.7e-24 115.9 183 45.4
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 4.9e-24 115.5 106 67.0
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 4.9e-24 115.5 201 45.3
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 8.3e-24 114.8 176 48.3
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.1e-23 114.4 198 44.4
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 1.1e-23 114.4 103 63.1
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.4e-23 114.0 192 44.3
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 1.8e-23 113.6 138 50.0
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 1.8e-23 113.6 166 47.6
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 1.8e-23 113.6 87 70.1
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 3.2e-23 112.8 119 58.8
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 4.1e-23 112.5 192 43.2
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 5.4e-23 112.1 99 63.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 7.0e-23 111.7 106 63.2
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 1.2e-22 110.9 201 42.8
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 2.0e-22 110.2 140 50.0
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.0e-22 110.2 139 51.8
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 2.7e-22 109.8 140 50.0
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 2.7e-22 109.8 195 45.6
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 3.5e-22 109.4 174 47.1
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 5.9e-22 108.6 145 50.3
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 7.8e-22 108.2 155 47.1
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.0e-21 107.8 189 43.4
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.7e-21 107.1 96 62.5
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 1.7e-21 107.1 115 62.6
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.7e-21 107.1 167 50.3
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 1.7e-21 107.1 200 42.5
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.7e-21 107.1 129 51.2
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 3.9e-21 105.9 112 58.9
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.9e-21 105.9 131 50.4
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 6.6e-21 105.1 121 54.5
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 8.6e-21 104.8 138 49.3
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 1.5e-20 104.0 192 45.3
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 2.5e-20 103.2 118 52.5
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 2.5e-20 103.2 99 62.6
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 2.5e-20 103.2 114 50.9
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 3.3e-20 102.8 191 42.9
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 4.3e-20 102.4 204 42.2
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.2e-19 100.9 191 42.4
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.2e-19 100.9 191 42.4
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.2e-19 100.9 158 44.3
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 4.7e-19 99.0 128 49.2
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 1.8e-18 97.1 67 74.6
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 3.1e-18 96.3 123 48.0
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 4.0e-18 95.9 204 39.7
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 4.0e-18 95.9 123 52.0
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 5.2e-18 95.5 101 56.4
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 2.6e-17 93.2 64 76.6
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 2.6e-17 93.2 191 40.8
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 3.4e-17 92.8 118 49.2
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.3e-16 90.9 117 49.6
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 3.7e-16 89.4 137 46.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.1e-15 87.8 191 39.8
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 1.1e-15 87.8 113 48.7
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 1.9e-15 87.0 131 49.6
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.2e-15 86.3 82 61.0
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 5.4e-15 85.5 171 39.8
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 2.0e-14 83.6 116 46.6
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.3e-13 80.9 69 59.4
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 3.3e-12 76.3 183 39.3
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 3.3e-12 76.3 127 39.4
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 5.6e-12 75.5 100 47.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 5.6e-12 75.5 132 41.7
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 9.5e-12 74.7 147 40.8
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 2.1e-11 73.6 103 49.5
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 3.6e-11 72.8 107 43.0
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 4.7e-11 72.4 105 44.8
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.1e-10 69.7 102 46.1
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.1e-10 69.7 102 46.1
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 3.1e-10 69.7 185 36.2
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.0e-10 69.3 100 47.0
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 4.0e-10 69.3 100 47.0


User provided reference genes

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