Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 1.5e-98 362.8 184 100.0
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 5.2e-67 258.1 184 73.4
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 9.6e-61 237.3 156 74.4
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 5.3e-59 231.5 181 66.3
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 4.4e-58 228.4 181 65.7
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 5.8e-58 228.0 181 66.9
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 5.8e-58 228.0 181 64.6
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 7.6e-58 227.6 181 65.7
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.3e-57 226.9 181 63.5
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.9e-57 225.7 181 64.1
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.9e-57 225.7 181 66.3
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 6.4e-57 224.6 181 65.2
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 6.4e-57 224.6 181 64.6
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 6.4e-57 224.6 181 64.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 6.4e-57 224.6 181 64.6
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 8.4e-57 224.2 181 66.3
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 8.4e-57 224.2 181 65.2
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.4e-57 224.2 183 66.1
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 1.4e-56 223.4 181 64.1
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.4e-56 223.4 181 64.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.9e-56 223.0 183 64.5
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.9e-56 223.0 181 64.1
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 2.4e-56 222.6 183 63.4
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 3.2e-56 222.2 181 64.6
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 4.2e-56 221.9 182 65.4
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 5.4e-56 221.5 181 66.3
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 9.3e-56 220.7 184 61.4
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 9.3e-56 220.7 183 61.2
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 9.3e-56 220.7 181 64.1
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.2e-55 220.3 183 63.9
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 1.6e-55 219.9 186 64.0
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 2.1e-55 219.5 183 64.5
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 2.1e-55 219.5 181 63.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 2.7e-55 219.2 181 64.1
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 3.5e-55 218.8 184 63.6
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 6.0e-55 218.0 193 62.2
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.0e-54 217.2 133 78.9
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.3e-54 216.9 180 65.0
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.3e-54 216.1 182 61.0
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.3e-54 216.1 181 63.0
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.0e-54 215.7 182 61.0
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.9e-54 215.3 183 62.8
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.9e-54 215.3 183 62.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.9e-54 215.3 182 62.6
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 3.9e-54 215.3 181 60.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 3.9e-54 215.3 181 63.5
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 6.6e-54 214.5 181 62.4
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 8.7e-54 214.2 181 61.3
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 8.7e-54 214.2 185 62.2
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.1e-53 213.8 182 61.5
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.5e-53 213.4 181 61.9
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.9e-53 213.0 182 63.2
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.3e-53 212.2 181 63.5
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.3e-53 212.2 183 60.7
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 7.3e-53 211.1 181 63.0
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 7.3e-53 211.1 181 63.0
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 9.6e-53 210.7 182 59.9
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.3e-52 210.3 186 61.3
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 1.6e-52 209.9 182 64.3
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 1.6e-52 209.9 186 62.9
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 1.6e-52 209.9 182 62.1
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.6e-52 209.9 183 62.3
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 2.8e-52 209.1 182 61.5
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 3.6e-52 208.8 182 60.4
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 3.6e-52 208.8 181 60.2
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.1e-51 207.2 185 61.1
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.4e-51 206.8 180 60.6
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.8e-51 206.5 152 69.1
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 4.0e-51 205.3 181 60.8
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 4.0e-51 205.3 182 59.3
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 6.9e-51 204.5 181 61.9
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 1.2e-50 203.8 145 69.7
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.5e-50 203.4 182 56.6
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 2.0e-50 203.0 182 61.0
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 2.6e-50 202.6 183 60.7
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 2.6e-50 202.6 116 83.6
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 3.4e-50 202.2 145 69.0
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 4.5e-50 201.8 146 69.2
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 7.6e-50 201.1 158 64.6
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 7.6e-50 201.1 146 65.8
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 2.9e-49 199.1 173 63.6
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 8.4e-49 197.6 167 61.1
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 8.4e-49 197.6 152 63.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.1e-48 197.2 115 81.7
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.4e-48 196.8 184 57.1
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 2.4e-48 196.1 114 82.5
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 4.2e-48 195.3 182 58.8
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 5.4e-48 194.9 167 60.5
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 5.4e-48 194.9 184 58.7
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 9.3e-48 194.1 181 57.5
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.6e-47 193.4 154 61.7
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.1e-47 193.0 182 58.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 2.7e-47 192.6 174 60.3
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 2.7e-47 192.6 180 56.7
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 2.7e-47 192.6 185 58.9
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 4.6e-47 191.8 183 60.1
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 7.9e-47 191.0 115 79.1
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.0e-46 190.7 144 65.3
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.8e-46 189.9 144 65.3
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.8e-46 189.9 180 56.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.3e-46 189.5 162 62.3
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.3e-46 189.5 168 58.9
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 5.1e-46 188.3 167 57.5
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 5.1e-46 188.3 168 58.3
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 6.7e-46 188.0 116 78.4
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 8.7e-46 187.6 144 63.9
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.5e-45 186.0 183 55.7
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 4.3e-45 185.3 170 57.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 2.1e-44 183.0 112 76.8
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.4e-43 180.3 181 54.1
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 9.0e-43 177.6 161 57.8
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.6e-42 176.0 172 54.7
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.2e-39 167.2 118 66.1
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.6e-39 166.8 125 68.0
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 2.1e-39 166.4 110 70.0
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 3.9e-38 162.2 114 68.4
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.7e-38 161.0 116 63.8
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 2.4e-35 152.9 115 59.1
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 5.0e-33 145.2 181 49.2
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 5.5e-32 141.7 108 59.3
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 1.0e-30 137.5 107 57.0
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 1.3e-30 137.1 106 57.5
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 6.3e-20 101.7 59 79.7
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 6.3e-20 101.7 59 79.7
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.0e-17 94.4 142 41.5
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 6.5e-17 91.7 102 51.0
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.1e-15 86.7 66 65.2
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 8.8e-14 81.3 107 50.5
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 5.7e-13 78.6 50 74.0


User provided reference genes

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