Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 2.3e-105 385.6 198 100.0
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 4.8e-50 201.8 178 64.0
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.4e-49 200.3 178 62.4
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.4e-49 199.5 179 62.0
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 3.2e-30 136.0 183 45.4
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 3.2e-30 136.0 176 47.7
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.2e-30 135.6 169 46.2
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 4.2e-30 135.6 184 46.7
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 9.4e-30 134.4 182 45.6
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 2.7e-29 132.9 177 45.2
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 2.7e-29 132.9 177 45.2
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 2.7e-29 132.9 183 44.8
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 3.6e-29 132.5 185 45.9
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.4e-28 130.6 183 44.3
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 6.7e-28 128.3 202 44.6
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 6.7e-28 128.3 183 45.4
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 2.0e-27 126.7 179 47.5
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 2.6e-27 126.3 185 46.5
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 4.8e-26 122.1 183 45.4
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 6.3e-26 121.7 185 45.4
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.4e-25 120.6 186 45.7
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 7.0e-25 118.2 185 43.8
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 9.1e-25 117.9 233 37.8
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.0e-24 116.7 186 45.2
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.0e-24 116.7 186 45.2
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 3.5e-24 115.9 181 44.2
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 7.7e-24 114.8 179 42.5
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 1.7e-23 113.6 204 40.7
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 2.2e-23 113.2 174 43.7
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 8.5e-23 111.3 182 42.3
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 8.5e-23 111.3 185 44.3
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 1.5e-22 110.5 182 39.0
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 1.5e-22 110.5 185 41.1
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 2.5e-22 109.8 183 41.5
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 4.2e-22 109.0 202 42.1
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 9.4e-22 107.8 175 41.1
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 2.1e-21 106.7 179 42.5
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 2.1e-21 106.7 185 43.8
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 2.7e-21 106.3 179 41.3
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 4.7e-21 105.5 175 42.3
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 6.1e-21 105.1 181 42.5
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 6.1e-21 105.1 182 40.7
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 8.0e-21 104.8 199 40.7
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 1.0e-20 104.4 182 39.6
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.0e-20 104.4 182 42.9
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 2.3e-20 103.2 185 36.8
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.5e-19 100.5 176 42.6
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 5.7e-19 98.6 183 40.4
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 5.7e-19 98.6 183 43.2
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 7.5e-19 98.2 197 40.1
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 7.5e-19 98.2 193 42.0
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 9.8e-19 97.8 182 39.6
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.3e-18 97.4 182 39.6
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.3e-18 97.4 178 41.0
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 3.7e-18 95.9 183 39.9
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 6.3e-18 95.1 183 42.6
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.4e-17 94.0 188 42.6
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 5.4e-17 92.0 186 40.9
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 9.1e-17 91.3 193 39.4
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.7e-16 89.7 182 41.2
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 4.5e-16 89.0 179 41.9
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 5.9e-16 88.6 176 39.8
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 5.9e-16 88.6 166 37.3
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 1.0e-15 87.8 190 38.4
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.3e-15 87.4 176 36.4
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 3.8e-15 85.9 174 33.3
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 6.5e-15 85.1 179 38.0
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 6.5e-15 85.1 185 39.5
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.5e-14 84.0 185 40.0
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 1.9e-14 83.6 127 40.9
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 3.2e-14 82.8 184 37.5
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 5.5e-14 82.0 184 37.0
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 5.5e-14 82.0 185 36.8
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 7.2e-14 81.6 188 36.7
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 9.4e-14 81.3 185 38.4
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.1e-13 80.1 185 38.9
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 3.6e-13 79.3 188 36.7
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 8.0e-13 78.2 185 38.4
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 1.0e-12 77.8 174 33.3
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 5.2e-12 75.5 170 33.5
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.0e-11 73.6 180 37.8
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 1.1e-09 67.8 119 38.7
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.4e-09 67.4 64 57.8
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.8e-09 67.0 63 50.8
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.1e-09 66.2 194 33.5
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.2e-08 64.3 156 31.4
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 1.6e-08 63.9 175 30.9
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 2.0e-08 63.5 63 49.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 2.0e-08 63.5 64 48.4
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 4.5e-08 62.4 66 48.5
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 5.9e-08 62.0 151 34.4
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 5.9e-08 62.0 59 57.6
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.0e-07 61.2 63 52.4
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 5.0e-07 58.9 211 31.8
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 1.1e-06 57.8 41 63.4
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.5e-06 57.4 132 33.3
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 3.3e-06 56.2 153 32.0
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 4.3e-06 55.8 39 64.1


User provided reference genes

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