Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 4.8e-128 461.5 281 100.0
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 4.4e-89 332.0 296 67.6
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 3.2e-76 289.3 295 60.0
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.2e-73 280.8 291 60.1
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 2.3e-69 266.5 286 58.0
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 4.7e-67 258.8 290 56.9
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 1.0e-66 257.7 288 56.6
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.0e-66 257.7 294 56.1
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.4e-66 257.3 221 66.5
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 6.8e-66 255.0 283 58.0
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 6.8e-66 255.0 288 55.9
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 8.9e-66 254.6 285 55.8
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.2e-65 254.2 285 55.8
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.3e-64 250.8 287 56.4
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.7e-64 250.4 291 56.7
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 3.7e-64 249.2 284 55.3
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 3.1e-63 246.1 291 59.1
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 3.5e-62 242.7 284 55.3
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 3.5e-62 242.7 286 55.6
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 1.0e-61 241.1 284 54.9
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.8e-61 239.2 279 55.9
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 4.3e-60 235.7 291 52.2
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 7.3e-60 235.0 294 55.4
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 1.2e-59 234.2 290 55.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 6.1e-59 231.9 286 53.8
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 8.0e-59 231.5 294 54.1
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 6.8e-58 228.4 286 53.1
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 8.9e-58 228.0 299 50.5
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 2.0e-57 226.9 286 54.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 3.4e-57 226.1 286 53.1
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.3e-56 224.2 288 55.2
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 1.7e-56 223.8 288 56.2
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 1.7e-56 223.8 299 55.2
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.4e-55 220.7 286 51.7
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 1.4e-55 220.7 290 58.6
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 2.4e-55 219.9 286 51.7
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 4.1e-55 219.2 284 53.2
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 9.2e-55 218.0 295 54.6
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 2.7e-54 216.5 285 51.9
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 6.0e-54 215.3 310 53.2
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 7.8e-54 214.9 291 53.6
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 7.8e-54 214.9 293 54.6
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.3e-53 214.2 291 53.6
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 6.6e-53 211.8 286 51.0
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.1e-52 211.1 291 53.3
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 2.5e-52 209.9 281 50.5
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.6e-52 208.8 291 52.6
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 5.6e-52 208.8 285 51.6
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 7.3e-52 208.4 288 51.4
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 9.5e-52 208.0 286 51.4
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 2.1e-51 206.8 282 53.9
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 2.8e-51 206.5 284 50.0
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.1e-50 204.5 292 51.7
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 2.3e-50 203.4 294 51.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 5.2e-50 202.2 294 51.0
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.5e-49 200.7 285 50.9
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 2.2e-48 196.8 284 48.6
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.9e-48 196.4 278 47.8
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.7e-48 196.1 178 64.6
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 3.7e-48 196.1 273 50.2
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 4.9e-48 195.7 284 48.2
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 6.4e-48 195.3 284 48.2
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.9e-47 193.7 289 47.4
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 7.0e-47 191.8 286 48.3
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 9.2e-47 191.4 284 47.2
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 9.2e-47 191.4 260 50.0
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.7e-46 189.9 286 47.2
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 4.6e-46 189.1 284 46.8
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 4.6e-46 189.1 288 47.6
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 4.6e-46 189.1 288 46.9
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 4.6e-46 189.1 287 47.0
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 2.3e-45 186.8 280 57.1
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 3.9e-45 186.0 283 44.9
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 5.0e-45 185.7 275 48.0
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 8.6e-45 184.9 284 46.1
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 8.6e-45 184.9 260 48.8
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 8.6e-45 184.9 290 47.6
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 8.6e-45 184.9 263 53.6
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.5e-44 184.1 293 46.4
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 1.9e-44 183.7 283 45.9
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.5e-44 183.3 278 51.1
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 1.2e-43 181.0 283 45.2
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.3e-42 176.8 202 57.4
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 8.9e-42 174.9 313 44.7
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.0e-41 173.7 283 44.2
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.7e-40 170.6 287 46.3
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.9e-40 169.9 289 46.4
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.1e-38 163.7 287 46.3
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 2.7e-38 163.3 293 42.3
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 3.9e-37 159.5 236 48.7
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 3.9e-37 159.5 279 45.2
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 5.6e-36 155.6 283 40.6
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 4.7e-35 152.5 257 52.9
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.1e-34 149.8 289 43.9
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 6.8e-34 148.7 230 46.1
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 4.4e-33 146.0 258 52.3
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 3.8e-32 142.9 272 46.3
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 4.9e-32 142.5 283 40.3
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 1.6e-30 137.5 253 42.3
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 7.8e-30 135.2 246 45.1
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.1e-28 131.3 170 52.4
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.9e-28 130.6 252 44.8
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 1.1e-23 114.8 343 33.2
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.2e-23 113.2 255 40.0
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.7e-21 107.5 238 45.0
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.1e-19 100.5 176 42.6
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 3.6e-19 99.8 234 37.2
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 4.0e-18 96.3 239 34.7
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 5.3e-18 95.9 173 44.5
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 5.6e-12 75.9 58 62.1
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 7.4e-12 75.5 44 75.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-11 74.7 58 60.3
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 1.3e-11 74.7 58 60.3
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 1.6e-11 74.3 44 75.0
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 2.8e-11 73.6 42 76.2
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 2.8e-11 73.6 58 60.3
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.8e-11 73.6 62 77.4
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 6.2e-11 72.4 40 77.5
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 8.1e-11 72.0 39 79.5
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 8.1e-11 72.0 56 60.7
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 8.1e-11 72.0 56 60.7
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 1.1e-10 71.6 42 73.8
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 2.4e-10 70.5 41 75.6
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-09 68.2 38 76.3
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 2.6e-09 67.0 38 76.3
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 2.6e-09 67.0 41 73.2
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 3.4e-09 66.6 189 41.3


User provided reference genes

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