Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 2.6e-311 1071.2 534 100.0
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 3.1e-83 313.5 519 40.3
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.9e-81 307.0 522 40.6
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.2e-68 265.0 517 36.8
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 2.9e-57 227.3 342 44.4
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.3e-33 148.7 543 27.3
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 1.1e-32 145.6 308 33.8
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 3.2e-32 144.1 387 32.8
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 7.1e-32 142.9 545 27.0
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 7.9e-31 139.4 513 27.5
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 4.8e-28 130.2 513 26.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 8.2e-28 129.4 502 26.7
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 9.0e-27 125.9 303 33.3
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.3e-25 122.1 523 27.2
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 2.9e-25 120.9 503 26.2
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.4e-24 118.6 363 27.3
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.7e-23 114.4 300 30.3
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 6.1e-23 113.2 315 30.2
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 7.9e-23 112.8 315 31.1
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 3.9e-22 110.5 170 42.9
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.9e-21 108.2 400 29.2
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 3.3e-21 107.5 330 27.9
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 4.3e-21 107.1 521 23.8
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 5.7e-21 106.7 482 25.7
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 9.7e-21 105.9 169 42.0
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 8.2e-20 102.8 222 36.9
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 8.2e-20 102.8 336 30.7
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 4.1e-19 100.5 248 35.1
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.2e-18 99.0 246 32.1
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.2e-18 99.0 384 26.8
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.2e-18 99.0 324 28.1
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 2.6e-18 97.8 305 31.8
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.5e-18 97.1 188 37.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 4.5e-18 97.1 372 30.4
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 5.9e-18 96.7 390 29.2
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.3e-17 95.5 412 27.2
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.7e-17 95.1 267 33.0
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 3.8e-17 94.0 372 28.5
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 6.5e-17 93.2 294 29.9
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 1.1e-16 92.4 268 28.7
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.1e-16 92.4 264 29.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 1.4e-16 92.0 183 36.1
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 2.5e-16 91.3 377 25.5
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 3.2e-16 90.9 375 28.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 9.4e-16 89.4 522 22.4
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.2e-15 89.0 153 39.2
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 2.1e-15 88.2 324 25.9
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 3.6e-15 87.4 191 38.2
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 3.6e-15 87.4 432 27.1
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.0e-14 85.9 442 26.0
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 2.3e-14 84.7 267 31.1
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.9e-14 84.0 320 25.6
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 5.1e-14 83.6 258 31.8
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 1.1e-13 82.4 359 30.1
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.5e-13 82.0 277 30.7
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 2.5e-13 81.3 438 25.3
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 4.3e-13 80.5 315 28.3
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 7.4e-13 79.7 294 27.2
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 9.7e-13 79.3 367 26.2
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 1.7e-12 78.6 236 28.4
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 2.2e-12 78.2 196 32.1
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 2.2e-12 78.2 172 33.7
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.7e-12 77.4 337 25.5
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.1e-11 75.9 187 33.2
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 1.1e-11 75.9 459 23.1
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 1.8e-11 75.1 185 31.9
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 1.8e-11 75.1 204 31.9
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 4.1e-11 73.9 185 32.4
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 4.1e-11 73.9 219 32.0
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 5.3e-11 73.6 268 29.5
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 6.9e-11 73.2 304 27.6
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 9.1e-11 72.8 332 25.9
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.0e-10 71.6 304 27.3
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.0e-10 71.6 283 31.8
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 2.0e-10 71.6 332 25.0
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 5.9e-10 70.1 284 27.1
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 5.9e-10 70.1 130 38.5
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 7.7e-10 69.7 125 38.4
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 1.0e-09 69.3 215 29.8
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 1.3e-09 68.9 165 30.3
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.3e-09 68.9 283 27.2
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 1.3e-09 68.9 148 33.8
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 1.3e-09 68.9 121 40.5
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 2.9e-09 67.8 143 36.4
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 3.8e-09 67.4 176 33.5
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 3.8e-09 67.4 96 40.6
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 6.5e-09 66.6 397 26.7
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.9e-08 65.1 305 25.6
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.9e-08 65.1 97 43.3
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 2.5e-08 64.7 324 26.2
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 4.7e-07 60.5 348 23.9
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 3.0e-06 57.8 349 24.9
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 6.7e-06 56.6 285 27.0


User provided reference genes

Program Settings