Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18058 Selenicereus undatus HOM05D005068 ORTHO05D030493 1.5e-88 329.7 197 100.0
Hund18654 Selenicereus undatus HOM05D005068 ORTHO05D007561 1.6e-53 213.4 209 73.7
AUR62009935 Chenopodium quinoa HOM05D005068 ORTHO05D007561 5.1e-44 181.8 171 59.6
AUR62001432 Chenopodium quinoa HOM05D005068 ORTHO05D007561 8.7e-44 181.0 171 59.1
EL10Ac7g16459 Beta vulgaris HOM05D005068 ORTHO05D007561 1.8e-41 173.3 172 57.0
CSS0009347 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 3.4e-40 169.1 174 55.7
CSS0048439 Camellia sinensis var. sinensis HOM05D005068 ORTHO05D007561 3.4e-40 169.1 174 55.7
Sabra01G0128700 Salix brachista HOM05D005068 ORTHO05D007561 1.3e-39 167.2 141 65.2
Ciclev10024779m.g Citrus clementina HOM05D005068 ORTHO05D007561 1.7e-39 166.8 172 58.7
Sc12g0010810 Simmondsia chinensis HOM05D005068 ORTHO05D007561 2.9e-39 166.0 160 59.4
Prupe.3G034700 Prunus persica HOM05D005068 ORTHO05D007561 8.4e-39 164.5 159 59.7
Manes.09G018800 Manihot esculenta HOM05D005068 ORTHO05D007561 1.9e-38 163.3 158 58.9
TAR628G1511 Trochodendron aralioides HOM05D005068 ORTHO05D007561 1.9e-38 163.3 159 58.5
Atru.chr1.4129 Acer truncatum HOM05D005068 ORTHO05D007561 2.5e-38 162.9 173 56.1
MD09G1175700 Malus domestica HOM05D005068 ORTHO05D007561 2.5e-38 162.9 159 58.5
MD17G1151100 Malus domestica HOM05D005068 ORTHO05D007561 5.5e-38 161.8 159 59.1
Gohir.A10G051500 Gossypium hirsutum HOM05D005068 ORTHO05D007561 1.6e-37 160.2 173 53.2
Gohir.D10G053200 Gossypium hirsutum HOM05D005068 ORTHO05D007561 1.6e-37 160.2 173 53.2
Gorai.011G056800 Gossypium raimondii HOM05D005068 ORTHO05D007561 1.6e-37 160.2 173 53.2
QL05p001958 Quercus lobata HOM05D005068 ORTHO05D007561 1.6e-37 160.2 159 57.9
Lalb_Chr04g0253821 Lupinus albus HOM05D005068 ORTHO05D007561 2.1e-37 159.8 159 57.9
Potri.001G164100 Populus trichocarpa HOM05D005068 ORTHO05D007561 2.1e-37 159.8 159 57.9
TAR383G0209 Trochodendron aralioides HOM05D005068 ORTHO05D007561 2.7e-37 159.5 159 56.6
Actinidia21819 Actinidia chinensis HOM05D005068 ORTHO05D007561 4.6e-37 158.7 155 56.8
Rhsim08G0242500 Rhododendron simsii HOM05D005068 ORTHO05D007561 4.6e-37 158.7 154 57.1
Cc04_g00890 Coffea canephora HOM05D005068 ORTHO05D007561 6.1e-37 158.3 172 52.9
BraA07t31420Z Brassica rapa HOM05D005068 ORTHO05D007561 7.9e-37 157.9 141 62.4
RcHm_v2.0_Chr2g0147011 Rosa chinensis HOM05D005068 ORTHO05D007561 7.9e-37 157.9 160 59.4
CiPaw.01G213900 Carya illinoinensis HOM05D005068 ORTHO05D007561 1.3e-36 157.1 172 54.7
PGR102G2847 Punica granatum HOM05D005068 ORTHO05D007561 1.3e-36 157.1 172 54.1
PGSC0003DMG400009145 Solanum tuberosum HOM05D005068 ORTHO05D007561 1.3e-36 157.1 159 56.0
Haze_16103 Corylus avellana HOM05D005068 ORTHO05D007561 1.8e-36 156.8 176 54.0
DCAR_026429 Daucus carota HOM05D005068 ORTHO05D007561 3.0e-36 156.0 159 57.9
TWI59G1220 Tripterygium wilfordii HOM05D005068 ORTHO05D007561 3.0e-36 156.0 173 52.0
Medtr5g019130 Medicago truncatula HOM05D005068 ORTHO05D007561 3.9e-36 155.6 180 52.8
Cfa003490 Carpinus fangiana HOM05D005068 ORTHO05D007561 5.1e-36 155.2 162 56.2
FAN05G3041 Fragaria x ananassa HOM05D005068 ORTHO05D007561 5.1e-36 155.2 159 58.5
GSVIVG01016696001 Vitis vinifera HOM05D005068 ORTHO05D007561 5.1e-36 155.2 153 58.2
arahy.Tifrunner.gnm1.ann1.X03KN2 Arachis hypogaea HOM05D005068 ORTHO05D007561 6.7e-36 154.8 152 55.9
FvH4_6g35460 Fragaria vesca HOM05D005068 ORTHO05D007561 6.7e-36 154.8 159 58.5
FAN09G4827 Fragaria x ananassa HOM05D005068 ORTHO05D007561 6.7e-36 154.8 159 58.5
FAN14G5424 Fragaria x ananassa HOM05D005068 ORTHO05D007561 6.7e-36 154.8 159 58.5
HanXRQChr12g0360151 Helianthus annuus HOM05D005068 ORTHO05D007561 8.7e-36 154.5 158 55.1
Lj5A31T61 Lonicera japonica HOM05D005068 ORTHO05D007561 8.7e-36 154.5 166 54.2
Lj3g0023295 Lotus japonicus HOM05D005068 ORTHO05D007561 8.7e-36 154.5 159 55.3
Sed0003275 Sechium edule HOM05D005068 ORTHO05D007561 8.7e-36 154.5 173 53.2
TPR.G16658 Trifolium pratense HOM05D005068 ORTHO05D007561 8.7e-36 154.5 158 55.7
Glyma.16G012100 Glycine max HOM05D005068 ORTHO05D007561 1.1e-35 154.1 173 54.3
Nitab4.5_0007072g0030 Nicotiana tabacum HOM05D005068 ORTHO05D007561 1.5e-35 153.7 159 54.7
Thecc.06G127400 Theobroma cacao HOM05D005068 ORTHO05D007561 2.5e-35 152.9 172 51.7
Glyma.07G043700 Glycine max HOM05D005068 ORTHO05D007561 5.7e-35 151.8 159 56.6
Medtr4g119670 Medicago truncatula HOM05D005068 ORTHO05D007561 5.7e-35 151.8 180 50.6
SalBow6G5915 Salvia bowleyana HOM05D005068 ORTHO05D007561 7.4e-35 151.4 167 55.7
PSO339G5314 Papaver somniferum HOM05D005068 ORTHO05D007561 9.7e-35 151.0 160 54.4
Solyc03g123530.4 Solanum lycopersicum HOM05D005068 ORTHO05D007561 9.7e-35 151.0 159 54.7
arahy.Tifrunner.gnm1.ann1.JS5XG8 Arachis hypogaea HOM05D005068 ORTHO05D007561 1.3e-34 150.6 175 51.4
CAN.G790.67 Capsicum annuum HOM05D005068 ORTHO05D007561 1.3e-34 150.6 168 52.4
Phvul.010G125200 Phaseolus vulgaris HOM05D005068 ORTHO05D007561 1.3e-34 150.6 156 56.4
Sp5g27520 Schrenkiella parvula HOM05D005068 ORTHO05D007561 1.3e-34 150.6 158 55.7
MELO3C024322.2 Cucumis melo HOM05D005068 ORTHO05D007561 1.6e-34 150.2 173 51.4
Sed0017975 Sechium edule HOM05D005068 ORTHO05D007561 1.6e-34 150.2 156 55.8
SGA_v2.0_scaffold71G23904 Striga asiatica HOM05D005068 ORTHO05D007561 1.6e-34 150.2 161 55.9
C06p46800 Brassica napus HOM05D005068 ORTHO05D007561 2.2e-34 149.8 166 53.0
BolC6t39723H Brassica oleracea HOM05D005068 ORTHO05D007561 2.2e-34 149.8 166 53.0
CsaV3_7G034120 Cucumis sativus L. HOM05D005068 ORTHO05D007561 2.2e-34 149.8 173 52.0
VMungo0331G1431 Vigna mungo HOM05D005068 ORTHO05D007561 2.2e-34 149.8 159 56.6
BcaB03g14995 Brassica carinata HOM05D005068 ORTHO05D007561 2.8e-34 149.4 160 55.0
MSTRG.22527 Avicennia marina HOM05D005068 ORTHO05D007561 6.3e-34 148.3 161 54.7
BcaC08g46695 Brassica carinata HOM05D005068 ORTHO05D007561 6.3e-34 148.3 160 53.8
CANSAT01G1537 Cannabis sativa HOM05D005068 ORTHO05D007561 8.2e-34 147.9 157 54.8
PSO384G5027 Papaver somniferum HOM05D005068 ORTHO05D007561 8.2e-34 147.9 160 53.8
Psat2g016360 Pisum sativum HOM05D005068 ORTHO05D007561 8.2e-34 147.9 159 55.3
THA.LOC104808063 Tarenaya hassleriana HOM05D005068 ORTHO05D007561 8.2e-34 147.9 153 56.9
CDE11G1047 Ceratophyllum demersum HOM05D005068 ORTHO05D007561 1.1e-33 147.5 172 50.6
AT1G72440 Arabidopsis thaliana HOM05D005068 ORTHO05D007561 1.4e-33 147.1 175 51.4
Eucgr.J02606 Eucalyptus grandis HOM05D005068 ORTHO05D007561 1.4e-33 147.1 158 54.4
Dinv37835 Davidia involucrata HOM05D005068 ORTHO05D007561 1.8e-33 146.7 105 67.6
Migut.I01119 Erythranthe guttata HOM05D005068 ORTHO05D007561 1.8e-33 146.7 161 52.8
Aa31LG4G2770 Aethionema arabicum HOM05D005068 ORTHO05D007561 4.1e-33 145.6 127 63.0
AL2G32110 Arabidopsis lyrata HOM05D005068 ORTHO05D007561 4.1e-33 145.6 175 50.9
CDE05G0629 Ceratophyllum demersum HOM05D005068 ORTHO05D007561 5.3e-33 145.2 158 52.5
vmacro14086 Vaccinium macrocarpon HOM05D005068 ORTHO05D007561 1.2e-32 144.1 204 45.1
HPP92_014041 Vanilla planifolia HOM05D005068 ORTHO05D007561 1.5e-32 143.7 166 47.6
Peaxi162Scf00535g00325 Petunia axillaris HOM05D005068 ORTHO05D007561 5.9e-32 141.7 172 51.7
ATR0317G028 Amborella trichopoda HOM05D005068 ORTHO05D007561 7.7e-32 141.4 161 51.6
Thhalv10018056m.g Eutrema salsugineum HOM05D005068 ORTHO05D007561 1.0e-31 141.0 152 54.6
Os09g0116400 Oryza sativa ssp. japonica HOM05D005068 ORTHO05D007561 1.0e-31 141.0 172 48.3
Aqoxy1G00349 Aquilegia oxysepala HOM05D005068 ORTHO05D007561 1.3e-31 140.6 156 53.2
Carub.0002s1929 Capsella rubella HOM05D005068 ORTHO05D007561 2.9e-31 139.4 173 50.9
MBI13_g01677_MAGBIO Magnolia biondii HOM05D005068 ORTHO05D007561 2.9e-31 139.4 153 52.9
unitig_26.g8921 Utricularia gibba HOM05D005068 ORTHO05D007561 2.9e-31 139.4 161 51.6
ECA234G0903 Erigeron canadensis HOM05D005068 ORTHO05D007561 3.8e-31 139.0 159 53.5
Peaxi162Scf00038g02247 Petunia axillaris HOM05D005068 ORTHO05D007561 3.8e-31 139.0 159 55.3
Ca_23422_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 5.0e-31 138.7 180 47.2
Ca_30848_v3 Cicer arietinum L. HOM05D005068 ORTHO05D007561 5.0e-31 138.7 180 47.2
Nitab4.5_0003981g0040 Nicotiana tabacum HOM05D005068 ORTHO05D007561 8.5e-31 137.9 159 52.8
Nitab4.5_0009947g0020 Nicotiana tabacum HOM05D005068 ORTHO05D007561 2.5e-30 136.3 159 52.2
CARHR065370 Cardamine hirsuta HOM05D005068 ORTHO05D007561 5.5e-30 135.2 146 53.4
Lsat_1_v5_gn_5_136720 Lactuca sativa HOM05D005068 ORTHO05D007561 5.5e-30 135.2 158 51.9
Psat7g194920 Pisum sativum HOM05D005068 ORTHO05D030493 1.6e-29 133.7 140 55.7
Nn8g38536 Nelumbo nucifera HOM05D005068 ORTHO05D007561 2.1e-29 133.3 83 75.9
ClCG09G001250 Citrullus lanatus HOM05D005068 ORTHO05D007561 4.6e-29 132.1 155 51.6
Zm00001eb008900 Zea mays HOM05D005068 ORTHO05D007561 7.9e-29 131.3 172 46.5
Pp3c8_7540 Physcomitrium patens HOM05D005068 ORTHO05D007561 3.0e-28 129.4 175 45.1
SEGI_35987 Sequoiadendron giganteum HOM05D005068 ORTHO05D007561 5.1e-28 128.6 165 47.3
Psat4g066440 Pisum sativum HOM05D005068 ORTHO05D030493 3.7e-26 122.5 83 73.5
ECA234G3781 Erigeron canadensis HOM05D005068 ORTHO05D007561 8.2e-26 121.3 93 64.5
FAN02G4153 Fragaria x ananassa HOM05D005068 ORTHO05D007561 8.2e-26 121.3 135 56.3
AagrBONN_evm.TU.Sc2ySwM_228.3616 Anthoceros agrestis HOM05D005068 ORTHO05D007561 1.2e-24 117.5 159 44.0
SHI25215 Sapria himalayana HOM05D005068 ORTHO05D007561 1.0e-23 114.4 191 40.3
Oeu000383.1 Olea europaea HOM05D005068 ORTHO05D007561 2.2e-23 113.2 164 45.1
Sopen03g041300 Solanum pennellii HOM05D005068 ORTHO05D007561 5.0e-23 112.1 171 43.9
CBR_g4353 Chara braunii HOM05D005068 ORTHO05D007561 8.5e-23 111.3 159 45.3
Cpa.g.sc25.173 Carica papaya HOM05D005068 ORTHO05D007561 1.2e-21 107.5 176 42.0
vmacro15071 Vaccinium macrocarpon HOM05D005068 ORTHO05D007561 2.3e-20 103.2 183 38.3
Mapoly0001s0039 Marchantia polymorpha HOM05D005068 ORTHO05D007561 3.9e-20 102.4 160 40.0
PRCOL_00007240 Prasinoderma coloniale HOM05D005068 ORTHO05D007561 3.8e-15 85.9 156 37.8
SMO356G0436 Selaginella moellendorffii HOM05D005068 ORTHO05D007561 1.5e-14 84.0 161 36.6
Cre10.g459600 Chlamydomonas reinhardtii HOM05D005068 ORTHO05D007561 4.7e-13 79.0 63 61.9
COL.COLO4_30833 Corchorus olitorius HOM05D005068 ORTHO05D007561 3.3e-11 72.8 114 47.4
Psat7g194960 Pisum sativum HOM05D005068 ORTHO05D030493 3.3e-11 72.8 93 49.5
Cc00_g06320 Coffea canephora HOM05D005068 ORTHO05D007561 6.3e-10 68.6 119 42.0
Cfa026526 Carpinus fangiana HOM05D005068 ORTHO05D007561 1.5e-06 57.4 150 29.3


User provided reference genes

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