Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17963 Selenicereus undatus HOM05D004018 ORTHO05D004408 6.0e-242 840.5 445 100.0
AUR62033708 Chenopodium quinoa HOM05D004018 ORTHO05D004408 1.6e-40 171.4 413 35.4
EL10Ac7g17209 Beta vulgaris HOM05D004018 ORTHO05D004408 3.3e-38 163.7 374 35.6
AUR62036814 Chenopodium quinoa HOM05D004018 ORTHO05D004408 4.2e-38 163.3 415 36.1
Dinv11250 Davidia involucrata HOM05D004018 ORTHO05D004408 8.6e-23 112.5 386 29.8
GSVIVG01011103001 Vitis vinifera HOM05D004018 ORTHO05D004408 8.9e-20 102.4 418 28.2
vmacro02552 Vaccinium macrocarpon HOM05D004018 ORTHO05D004408 2.6e-19 100.9 383 27.4
Atru.chr5.1370 Acer truncatum HOM05D004018 ORTHO05D004408 2.2e-18 97.8 419 28.9
Sc24g0004120 Simmondsia chinensis HOM05D004018 ORTHO05D004408 2.4e-17 94.4 395 28.4
TAR633G0135 Trochodendron aralioides HOM05D004018 ORTHO05D004408 3.2e-17 94.0 379 28.0
TAR362G1233 Trochodendron aralioides HOM05D004018 ORTHO05D004408 2.7e-16 90.9 390 26.9
Nitab4.5_0001028g0170 Nicotiana tabacum HOM05D004018 ORTHO05D004408 2.3e-15 87.8 401 25.7
TAR365G0909 Trochodendron aralioides HOM05D004018 ORTHO05D004408 1.9e-14 84.7 404 27.2
Nn4g26185 Nelumbo nucifera HOM05D004018 ORTHO05D004408 9.5e-14 82.4 385 27.3
Actinidia09153 Actinidia chinensis HOM05D004018 ORTHO05D004408 1.2e-13 82.0 426 24.9
Oeu028079.1 Olea europaea HOM05D004018 ORTHO05D004408 6.2e-13 79.7 391 25.3
arahy.Tifrunner.gnm1.ann1.6Q7DFN Arachis hypogaea HOM05D004018 ORTHO05D004408 8.1e-13 79.3 71 50.7
arahy.Tifrunner.gnm1.ann1.BX9H6P Arachis hypogaea HOM05D004018 ORTHO05D004408 8.1e-13 79.3 71 50.7
MSTRG.12568 Avicennia marina HOM05D004018 ORTHO05D004408 1.4e-12 78.6 118 40.7
Cfa006111 Carpinus fangiana HOM05D004018 ORTHO05D004408 3.1e-12 77.4 390 24.1
Eucgr.H01516 Eucalyptus grandis HOM05D004018 ORTHO05D004408 3.1e-12 77.4 396 25.5
Nitab4.5_0011633g0010 Nicotiana tabacum HOM05D004018 ORTHO05D004408 4.0e-12 77.0 411 24.8
Oeu047882.1 Olea europaea HOM05D004018 ORTHO05D004408 4.0e-12 77.0 382 25.7
SalBow6G7233 Salvia bowleyana HOM05D004018 ORTHO05D004408 8.9e-12 75.9 99 40.4
Migut.N02157 Erythranthe guttata HOM05D004018 ORTHO05D004408 1.2e-11 75.5 405 24.4
Hma1.2p1_0628F.1_g191955 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 1.2e-11 75.5 435 24.6
SGA_v2.0_scaffold258G45767 Striga asiatica HOM05D004018 ORTHO05D004408 1.2e-11 75.5 130 38.5
TWI14G0752 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 1.2e-11 75.5 433 24.2
TAR365G0933 Trochodendron aralioides HOM05D004018 ORTHO05D004408 1.5e-11 75.1 401 25.4
Hma1.2p1_0118F.1_g056525 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 2.6e-11 74.3 55 58.2
Hma1.2p1_0118F.1_g056540 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 2.6e-11 74.3 55 58.2
RcHm_v2.0_Chr6g0291481 Rosa chinensis HOM05D004018 ORTHO05D004408 3.4e-11 73.9 74 52.7
Sabra02G0167700 Salix brachista HOM05D004018 ORTHO05D004408 4.4e-11 73.6 56 64.3
Eucgr.K03388 Eucalyptus grandis HOM05D004018 ORTHO05D004408 5.8e-11 73.2 144 36.1
Potri.014G139000 Populus trichocarpa HOM05D004018 ORTHO05D004408 5.8e-11 73.2 55 61.8
QL12p022414 Quercus lobata HOM05D004018 ORTHO05D004408 7.6e-11 72.8 397 23.9
CiPaw.08G103600 Carya illinoinensis HOM05D004018 ORTHO05D004408 9.9e-11 72.4 158 31.0
Peaxi162Scf00570g00314 Petunia axillaris HOM05D004018 ORTHO05D004408 9.9e-11 72.4 373 23.9
MBI17_g12005_MAGBIO Magnolia biondii HOM05D004018 ORTHO05D004408 1.3e-10 72.0 225 28.0
Thecc.01G282900 Theobroma cacao HOM05D004018 ORTHO05D004408 1.3e-10 72.0 395 25.6
Ciclev10018884m.g Citrus clementina HOM05D004018 ORTHO05D004408 1.7e-10 71.6 211 31.3
TWI59G1189 Tripterygium wilfordii HOM05D004018 ORTHO05D004408 1.7e-10 71.6 64 53.1
Lsat_1_v5_gn_5_187400 Lactuca sativa HOM05D004018 ORTHO05D004408 2.2e-10 71.2 130 38.5
Manes.01G209500 Manihot esculenta HOM05D004018 ORTHO05D004408 2.2e-10 71.2 109 42.2
Sopen09g026560 Solanum pennellii HOM05D004018 ORTHO05D004408 2.9e-10 70.9 383 24.3
Gorai.004G215600 Gossypium raimondii HOM05D004018 ORTHO05D004408 3.7e-10 70.5 371 24.0
Lj5g0010123 Lotus japonicus HOM05D004018 ORTHO05D004408 3.7e-10 70.5 52 61.5
VMungo0720G2698 Vigna mungo HOM05D004018 ORTHO05D004408 3.7e-10 70.5 49 65.3
Haze_04739 Corylus avellana HOM05D004018 ORTHO05D004408 4.9e-10 70.1 389 24.7
Gohir.A08G185500 Gossypium hirsutum HOM05D004018 ORTHO05D004408 4.9e-10 70.1 71 43.7
Ca_09771_v3 Cicer arietinum L. HOM05D004018 ORTHO05D004408 6.4e-10 69.7 49 59.2
FAN24G0467 Fragaria x ananassa HOM05D000644 ORTHO05D004408 6.4e-10 69.7 67 47.8
Gorai.008G005300 Gossypium raimondii HOM05D004018 ORTHO05D004408 6.4e-10 69.7 392 24.2
Gohir.A12G005900 Gossypium hirsutum HOM05D004018 ORTHO05D004408 8.4e-10 69.3 390 24.1
Psat6g061120 Pisum sativum HOM05D004018 ORTHO05D004408 8.4e-10 69.3 49 59.2
Solyc09g064860.3 Solanum lycopersicum HOM05D004018 ORTHO05D004408 8.4e-10 69.3 378 24.3
Aqoxy2G03257 Aquilegia oxysepala HOM05D004018 ORTHO05D004408 1.1e-09 68.9 48 68.8
Sabra14G0104800 Salix brachista HOM05D004018 ORTHO05D004408 1.1e-09 68.9 60 56.7
SGA_v2.0_scaffold11G05799 Striga asiatica HOM05D004018 ORTHO05D004408 1.1e-09 68.9 47 66.0
TPR.G1562 Trifolium pratense HOM05D004018 ORTHO05D004408 1.1e-09 68.9 48 60.4
Carub.0001s0240 Capsella rubella HOM05D004018 ORTHO05D004408 1.9e-09 68.2 56 60.7
Medtr1g072560 Medicago truncatula HOM05D004018 ORTHO05D004408 1.9e-09 68.2 49 59.2
BcaC05g24644 Brassica carinata HOM05D004018 ORTHO05D004408 3.2e-09 67.4 46 63.0
A10p01840 Brassica napus HOM05D003188 ORTHO05D003602 3.2e-09 67.4 46 63.0
C05p01820 Brassica napus HOM05D003188 ORTHO05D003602 3.2e-09 67.4 46 63.0
BolC5t28960H Brassica oleracea HOM05D003188 ORTHO05D003602 3.2e-09 67.4 46 63.0
BraA10t42458Z Brassica rapa HOM05D004018 ORTHO05D004408 3.2e-09 67.4 46 63.0
THA.LOC104801219 Tarenaya hassleriana HOM05D004018 ORTHO05D004408 3.2e-09 67.4 130 37.7
Cc01_g19730 Coffea canephora HOM05D004018 ORTHO05D004408 4.1e-09 67.0 377 23.1
AT1G03290 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 5.4e-09 66.6 69 49.3
COL.COLO4_09133 Corchorus olitorius HOM05D004018 ORTHO05D004408 5.4e-09 66.6 175 30.3
FvH4_2g23870 Fragaria vesca HOM05D004018 ORTHO05D004408 5.4e-09 66.6 67 46.3
ECA248G1820 Erigeron canadensis HOM05D004018 ORTHO05D004408 7.1e-09 66.2 158 32.9
FAN27G0494 Fragaria x ananassa HOM05D000644 ORTHO05D004408 7.1e-09 66.2 76 42.1
VMungo0720G2446 Vigna mungo HOM05D004018 ORTHO05D004408 7.1e-09 66.2 49 67.3
CARHR002590 Cardamine hirsuta HOM05D004018 ORTHO05D004408 9.2e-09 65.9 104 40.4
BcaC05g24545 Brassica carinata HOM05D001026 ORTHO05D007776 1.2e-08 65.5 52 57.7
PGR044G1283 Punica granatum HOM05D004018 ORTHO05D004408 1.6e-08 65.1 161 36.0
AL8G42480 Arabidopsis lyrata HOM05D008017 ORTHO05D009829 2.1e-08 64.7 55 52.7
AT5G64980 Arabidopsis thaliana HOM05D008017 ORTHO05D009829 2.1e-08 64.7 55 52.7
Duzib138G0587 Durio zibethinus HOM05D004018 ORTHO05D004408 2.1e-08 64.7 49 59.2
Sp1g02290 Schrenkiella parvula HOM05D004018 ORTHO05D004408 2.1e-08 64.7 46 60.9
Carub.0006s3419 Capsella rubella HOM05D004018 ORTHO05D004408 2.7e-08 64.3 92 40.2
Glyma.02G148900 Glycine max HOM05D004018 ORTHO05D004408 2.7e-08 64.3 122 37.7
Phvul.007G169800 Phaseolus vulgaris HOM05D004018 ORTHO05D004408 2.7e-08 64.3 389 25.2
Thhalv10007330m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 3.5e-08 63.9 91 44.0
CANSAT25G1423 Cannabis sativa HOM05D004018 ORTHO05D004408 4.6e-08 63.5 378 26.2
Duzib133G0055 Durio zibethinus HOM05D004018 ORTHO05D004408 4.6e-08 63.5 401 25.2
AL6G50040 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 6.0e-08 63.2 47 57.4
BolC2t09981H Brassica oleracea HOM05D004018 ORTHO05D004408 6.0e-08 63.2 75 41.3
Gohir.D12G005400 Gossypium hirsutum HOM05D004018 ORTHO05D004408 6.0e-08 63.2 389 23.7
AT4G02880 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 7.8e-08 62.8 47 57.4
Prupe.8G244100 Prunus persica HOM05D004018 ORTHO05D004408 7.8e-08 62.8 52 61.5
BcaC03g16187 Brassica carinata HOM05D004018 ORTHO05D004408 1.0e-07 62.4 46 58.7
Carub.0008s2581 Capsella rubella HOM05D008017 ORTHO05D009829 1.3e-07 62.0 56 48.2
CDE05G3031 Ceratophyllum demersum HOM05D004018 ORTHO05D004408 1.3e-07 62.0 46 60.9
DCAR_002748 Daucus carota HOM05D004018 ORTHO05D004408 1.7e-07 61.6 52 51.9
Sp6g02920 Schrenkiella parvula HOM05D004018 ORTHO05D004408 1.7e-07 61.6 201 30.3
DCAR_018413 Daucus carota HOM05D004018 ORTHO05D004408 2.3e-07 61.2 46 63.0
FAN20G3038 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.3e-07 61.2 236 24.6
Lalb_Chr02g0142861 Lupinus albus HOM05D004018 ORTHO05D004408 3.0e-07 60.8 138 34.1
FAN15G3429 Fragaria x ananassa HOM05D000644 ORTHO05D004408 3.9e-07 60.5 126 31.7
C03p61050 Brassica napus HOM05D008017 ORTHO05D009829 5.1e-07 60.1 70 42.9
BolC3t18367H Brassica oleracea HOM05D008017 ORTHO05D009829 5.1e-07 60.1 70 42.9
CARHR251270 Cardamine hirsuta HOM05D004018 ORTHO05D004408 5.1e-07 60.1 46 56.5
A03p30760 Brassica napus HOM05D004018 ORTHO05D004408 8.6e-07 59.3 82 41.5
BolC3t16038H Brassica oleracea HOM05D004018 ORTHO05D004408 8.6e-07 59.3 109 37.6
CiPaw.07G093900 Carya illinoinensis HOM05D004018 ORTHO05D004408 8.6e-07 59.3 397 24.2
Migut.D00269 Erythranthe guttata HOM05D004018 ORTHO05D004408 8.6e-07 59.3 52 51.9
TAR636G0803 Trochodendron aralioides HOM05D004018 ORTHO05D004408 8.6e-07 59.3 50 60.0
BraA03t12255Z Brassica rapa HOM05D004018 ORTHO05D004408 1.5e-06 58.5 46 58.7
BraA06t26123Z Brassica rapa HOM05D008017 ORTHO05D009829 1.9e-06 58.2 57 50.9
AL1G12800 Arabidopsis lyrata HOM05D004018 ORTHO05D004408 2.5e-06 57.8 145 36.6
A06p31900 Brassica napus HOM05D008017 ORTHO05D009829 2.5e-06 57.8 57 50.9
ClCG09G006910 Citrullus lanatus HOM05D004018 ORTHO05D004408 2.5e-06 57.8 127 33.1
Sp2g28160 Schrenkiella parvula HOM05D008017 ORTHO05D009829 2.5e-06 57.8 46 54.3
C03p37460 Brassica napus HOM05D004018 ORTHO05D004408 4.3e-06 57.0 108 38.0
SalBow4G1908 Salvia bowleyana HOM05D004018 ORTHO05D004408 4.3e-06 57.0 154 33.1
A02p25020 Brassica napus HOM05D004018 ORTHO05D004408 7.3e-06 56.2 174 30.5
C02p39650 Brassica napus HOM05D004018 ORTHO05D004408 7.3e-06 56.2 185 29.7
BraA02t07491Z Brassica rapa HOM05D004018 ORTHO05D004408 9.6e-06 55.8 174 30.5
Rhsim13G0022700 Rhododendron simsii HOM05D000644 ORTHO05D004408 9.6e-06 55.8 363 24.0
HPP92_003154 Vanilla planifolia HOM05D004018 ORTHO05D004408 9.6e-06 55.8 46 54.3


User provided reference genes

Program Settings