Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 3.9e-214 748.0 428 100.0
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 9.0e-62 241.9 164 74.4
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.2e-61 241.5 163 74.8
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.2e-61 241.5 163 74.8
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 5.9e-61 239.2 163 73.6
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 7.7e-61 238.8 171 70.8
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.3e-60 238.0 159 72.3
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 5.0e-60 236.1 140 79.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 8.5e-60 235.3 179 67.6
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.4e-59 234.6 168 70.8
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 2.5e-59 233.8 395 46.3
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 4.2e-59 233.0 152 72.4
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 4.2e-59 233.0 175 69.1
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 5.5e-59 232.6 392 47.4
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 9.4e-59 231.9 143 78.3
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 2.1e-58 230.7 138 77.5
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 2.7e-58 230.3 155 75.5
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.7e-58 230.3 142 76.1
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 6.1e-58 229.2 138 77.5
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 6.1e-58 229.2 141 78.0
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 7.9e-58 228.8 157 71.3
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.8e-57 227.6 177 66.1
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 3.0e-57 226.9 142 77.5
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 3.9e-57 226.5 150 74.0
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 5.1e-57 226.1 164 68.9
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 5.1e-57 226.1 176 67.6
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.7e-57 225.7 160 73.1
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 1.1e-56 224.9 161 67.7
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.1e-56 224.9 143 76.2
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 2.0e-56 224.2 178 64.6
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 2.5e-56 223.8 165 64.8
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 2.5e-56 223.8 179 65.9
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 3.3e-56 223.4 164 67.7
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 3.3e-56 223.4 164 67.7
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 3.3e-56 223.4 128 82.8
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 9.7e-56 221.9 150 71.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 9.7e-56 221.9 138 76.1
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.3e-55 221.5 169 66.9
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.7e-55 221.1 126 81.7
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 2.2e-55 220.7 195 58.5
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 2.8e-55 220.3 140 73.6
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 2.8e-55 220.3 164 67.1
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 3.7e-55 219.9 145 75.9
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 3.7e-55 219.9 174 66.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 3.7e-55 219.9 185 64.9
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.7e-55 219.9 124 79.8
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 4.8e-55 219.5 140 75.0
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 4.8e-55 219.5 129 76.0
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 4.8e-55 219.5 132 74.2
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.8e-55 219.5 143 71.3
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 6.3e-55 219.2 156 67.9
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 8.2e-55 218.8 154 70.8
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 1.1e-54 218.4 140 73.6
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.1e-54 218.4 140 75.7
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.4e-54 218.0 138 76.1
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 1.4e-54 218.0 157 69.4
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.8e-54 217.6 137 77.4
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.8e-54 217.6 143 73.4
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.8e-54 217.6 136 75.7
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 2.4e-54 217.2 142 72.5
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 2.4e-54 217.2 154 71.4
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.4e-54 217.2 135 73.3
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 2.4e-54 217.2 176 63.1
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 3.1e-54 216.9 136 75.7
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 3.1e-54 216.9 161 70.8
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 4.1e-54 216.5 127 78.7
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 4.1e-54 216.5 145 70.3
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 5.3e-54 216.1 139 70.5
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 6.9e-54 215.7 161 70.2
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 2.0e-53 214.2 171 65.5
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 4.5e-53 213.0 140 73.6
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 4.5e-53 213.0 140 73.6
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 4.5e-53 213.0 140 73.6
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 4.5e-53 213.0 136 74.3
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 4.5e-53 213.0 137 75.2
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 5.9e-53 212.6 143 70.6
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 1.0e-52 211.8 140 72.9
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.0e-52 211.8 126 77.0
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 1.0e-52 211.8 143 72.7
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.0e-52 211.8 145 69.7
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.3e-52 211.5 171 65.5
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 1.7e-52 211.1 197 58.9
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.2e-52 210.7 157 67.5
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 2.2e-52 210.7 143 72.7
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 5.0e-52 209.5 165 66.7
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 1.9e-51 207.6 125 77.6
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 4.2e-51 206.5 156 67.9
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 5.5e-51 206.1 179 63.7
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 2.6e-48 197.2 377 40.8
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 5.7e-48 196.1 145 67.6
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.0e-44 185.3 141 66.7
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 9.4e-43 178.7 150 59.3
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.6e-42 177.9 158 57.0
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 7.0e-38 162.5 153 54.2
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 5.9e-37 159.5 128 59.4
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 3.7e-31 140.2 88 75.0
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 2.5e-27 127.5 84 69.0
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 3.2e-27 127.1 81 75.3
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.2e-26 125.2 81 71.6
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.2e-26 125.2 81 71.6
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.6e-26 124.8 69 82.6
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.3e-23 115.2 62 82.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.0e-17 95.5 77 59.7
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 2.3e-17 94.4 255 36.9
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 7.5e-16 89.4 92 57.6
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 1.7e-15 88.2 397 32.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.7e-15 87.0 92 56.5
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 6.3e-15 86.3 94 46.8
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.8e-14 84.7 51 76.5
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 2.4e-14 84.3 51 76.5
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.0e-13 81.3 92 56.5
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 3.9e-12 77.0 42 85.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 1.9e-11 74.7 45 73.3
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 3.3e-11 73.9 40 100.0
Hund25547 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.3e-11 73.9 40 100.0
Hund29189 Selenicereus undatus HOM05D008000 ORTHO05D000006 3.3e-11 73.9 40 100.0
Hund29191 Selenicereus undatus HOM05D008000 ORTHO05D000006 3.3e-11 73.9 40 100.0
Hund06100 Selenicereus undatus HOM05D000660 ORTHO05D000766 9.5e-11 72.4 40 97.5
Hund16357 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.6e-10 71.6 40 95.0
Hund22908 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.6e-10 71.6 40 95.0
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 7.5e-08 62.8 40 82.5
Hund24704 Selenicereus undatus HOM05D000003 ORTHO05D000006 2.4e-06 57.8 33 90.9
Hund17675 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.4e-06 56.6 40 72.5


User provided reference genes

Program Settings