Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 2.1e-115 419.1 220 100.0
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.7e-72 276.6 211 64.0
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.7e-72 276.6 211 64.0
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 5.0e-72 275.0 216 67.6
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 9.3e-71 270.8 212 68.9
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 7.9e-70 267.7 211 63.0
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 2.5e-63 246.1 175 65.7
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 3.2e-63 245.7 186 65.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.7e-62 242.7 175 66.9
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 4.6e-62 241.9 177 63.8
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 4.6e-62 241.9 176 61.9
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 7.9e-62 241.1 175 66.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.0e-61 240.7 176 67.0
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.4e-61 240.4 175 65.7
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.4e-61 240.4 179 64.8
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 3.0e-61 239.2 175 63.4
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 8.8e-61 237.7 175 65.1
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 8.8e-61 237.7 173 68.2
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.5e-60 236.9 175 66.9
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 2.0e-60 236.5 173 67.1
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 4.4e-60 235.3 190 63.7
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 5.7e-60 235.0 175 65.7
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.7e-60 235.0 174 66.7
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 5.7e-60 235.0 175 64.0
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 9.7e-60 234.2 172 66.3
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.3e-59 233.8 173 63.6
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 2.2e-59 233.0 188 60.6
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 2.2e-59 233.0 174 64.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.8e-59 232.6 188 60.6
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.8e-59 232.6 174 64.9
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 4.8e-59 231.9 173 65.9
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 4.8e-59 231.9 175 61.7
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 4.8e-59 231.9 184 62.0
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 4.8e-59 231.9 211 58.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 6.3e-59 231.5 185 60.0
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 6.3e-59 231.5 175 61.7
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 8.2e-59 231.1 180 63.9
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 8.2e-59 231.1 173 63.0
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.1e-58 230.7 174 67.2
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.1e-58 230.7 175 65.1
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.1e-58 230.7 174 63.8
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.4e-58 230.3 175 64.6
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.4e-58 230.3 173 66.5
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 1.8e-58 229.9 173 63.6
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 1.8e-58 229.9 174 63.8
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 2.4e-58 229.6 183 62.3
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.4e-58 229.6 173 65.9
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.1e-58 228.8 173 66.5
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 4.1e-58 228.8 173 65.9
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.3e-58 228.4 175 62.9
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 5.3e-58 228.4 175 64.6
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 6.9e-58 228.0 181 60.2
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 9.1e-58 227.6 176 64.2
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.5e-57 226.9 173 60.1
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.5e-57 226.9 173 64.7
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 2.0e-57 226.5 175 62.9
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 2.6e-57 226.1 171 63.2
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.6e-57 226.1 175 60.6
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 4.5e-57 225.3 175 61.7
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.0e-56 224.2 184 62.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.3e-56 223.8 175 61.7
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.2e-56 223.0 173 62.4
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 3.8e-56 222.2 167 64.1
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.8e-56 222.2 167 64.1
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.0e-56 221.9 190 61.6
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 6.5e-56 221.5 210 57.6
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 6.5e-56 221.5 177 63.8
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 6.5e-56 221.5 185 60.0
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.4e-55 220.3 175 61.1
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 3.2e-55 219.2 167 64.7
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 4.2e-55 218.8 167 60.5
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.2e-54 217.2 220 55.5
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 1.2e-54 217.2 173 63.0
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.6e-54 216.9 169 59.8
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.6e-54 216.9 176 61.9
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.6e-54 216.9 168 61.9
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 4.7e-54 215.3 168 63.7
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 6.1e-54 214.9 218 52.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.0e-53 214.2 177 61.0
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.8e-53 213.4 211 52.6
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.8e-53 213.4 211 54.0
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.8e-53 213.4 211 54.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 3.3e-52 209.1 172 59.9
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 5.7e-52 208.4 219 52.5
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 5.7e-52 208.4 211 55.0
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 5.7e-52 208.4 172 57.0
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 7.4e-52 208.0 219 52.5
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 9.7e-52 207.6 218 50.9
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 2.2e-51 206.5 174 56.3
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 3.7e-51 205.7 211 54.0
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 8.2e-51 204.5 170 60.6
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 8.2e-51 204.5 172 57.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.8e-50 203.4 175 60.6
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 5.3e-50 201.8 220 51.4
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.2e-49 200.7 219 52.5
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.2e-49 200.7 175 60.0
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.6e-49 200.3 219 52.1
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 1.6e-49 200.3 175 60.0
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.6e-49 200.3 219 52.1
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 2.6e-49 199.5 175 60.0
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 3.5e-49 199.1 163 56.4
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 3.5e-49 199.1 175 60.0
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 8.5e-48 194.5 175 57.7
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 3.2e-47 192.6 180 55.0
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.1e-46 189.9 178 55.1
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 2.8e-43 179.5 174 50.6
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 3.7e-43 179.1 184 48.4
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 2.4e-42 176.4 175 54.3
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 7.7e-41 171.4 170 50.6
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 2.2e-40 169.9 142 62.7
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 5.0e-40 168.7 170 49.4
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.5e-39 167.2 174 47.1
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 2.5e-39 166.4 112 75.0
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 5.5e-39 165.2 100 75.0
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 1.5e-36 157.1 136 57.4
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.2e-35 153.3 89 79.8
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 2.8e-35 152.9 112 66.1
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.8e-35 152.1 173 45.7
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.8e-35 152.1 173 45.7
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.7e-33 146.4 96 71.9
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.0e-32 144.4 165 44.8
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.2e-30 137.5 96 67.7
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 5.4e-26 122.1 168 39.3
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 5.7e-20 102.1 76 60.5
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 1.7e-19 100.5 70 65.7
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 9.2e-18 94.7 86 57.0
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 2.0e-17 93.6 73 58.9
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.5e-17 92.8 69 63.8
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 4.6e-17 92.4 70 60.0
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 7.8e-17 91.7 93 47.3
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 7.3e-15 85.1 67 58.2
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 1.8e-13 80.5 158 31.0
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.5e-12 77.4 48 72.9
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 1.1e-10 71.2 38 81.6
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 5.0e-08 62.4 160 25.6


User provided reference genes

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