Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.7e-124 449.5 248 100.0
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.6e-77 292.7 243 67.5
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 9.5e-72 274.2 244 59.8
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.6e-65 251.1 221 58.8
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.9e-59 233.4 242 54.5
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 4.4e-53 212.2 251 47.0
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 4.9e-52 208.8 219 49.3
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.4e-51 207.2 216 53.2
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 9.3e-51 204.5 243 46.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 1.2e-50 204.1 228 49.1
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 3.5e-50 202.6 245 49.4
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 7.8e-50 201.4 245 48.6
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.0e-49 201.1 244 47.5
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.3e-49 199.9 243 46.5
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 2.3e-49 199.9 244 48.4
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 3.0e-49 199.5 239 48.5
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 3.9e-49 199.1 244 45.5
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 8.7e-49 198.0 213 51.6
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.5e-48 197.2 247 45.7
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.5e-48 196.4 216 50.9
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.3e-48 196.1 236 44.5
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 4.3e-48 195.7 243 46.5
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.3e-47 194.1 243 44.0
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.3e-47 194.1 245 46.1
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 1.6e-47 193.7 251 44.6
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.6e-47 193.7 251 44.6
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 2.8e-47 193.0 209 49.8
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.6e-47 192.6 251 44.6
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.6e-47 192.6 250 44.0
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 3.6e-47 192.6 240 45.0
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 6.2e-47 191.8 204 49.0
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.4e-46 190.7 212 50.5
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.4e-46 190.7 251 44.6
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.8e-46 190.3 231 45.0
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 3.1e-46 189.5 239 44.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 6.9e-46 188.3 248 43.5
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 9.0e-46 188.0 212 48.6
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.5e-45 187.2 251 43.4
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 2.6e-45 186.4 209 50.7
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 3.4e-45 186.0 231 44.2
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 4.5e-45 185.7 233 45.5
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 5.8e-45 185.3 197 49.2
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 7.6e-45 184.9 215 47.9
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 7.6e-45 184.9 249 43.0
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.3e-44 184.1 233 45.1
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.3e-44 184.1 244 43.4
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.3e-44 184.1 222 45.9
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.7e-44 183.7 215 48.4
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.9e-44 183.0 244 47.1
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 3.8e-44 182.6 215 46.0
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.8e-44 182.6 227 45.4
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 8.4e-44 181.4 221 44.8
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.1e-43 181.0 244 43.0
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.4e-43 180.6 244 41.8
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.4e-43 180.6 243 43.6
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 4.2e-43 179.1 220 46.4
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 7.1e-43 178.3 236 44.5
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 7.1e-43 178.3 239 41.0
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.7e-42 176.4 210 46.7
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 4.6e-42 175.6 236 39.8
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 6.0e-42 175.3 237 42.6
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 2.3e-41 173.3 220 45.0
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.3e-41 173.3 222 42.8
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 8.7e-41 171.4 251 43.0
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.1e-40 171.0 245 42.4
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.1e-40 171.0 241 44.0
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 1.1e-40 171.0 238 41.6
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.3e-40 169.5 246 42.3
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 3.3e-40 169.5 218 42.7
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 5.6e-40 168.7 238 40.8
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 7.4e-40 168.3 233 43.3
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 9.6e-40 167.9 252 43.7
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.3e-39 167.5 234 39.7
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.6e-39 167.2 243 39.5
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.1e-39 166.8 251 41.8
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 2.8e-39 166.4 210 43.8
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 3.7e-39 166.0 261 42.1
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 3.7e-39 166.0 233 42.5
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.7e-39 166.0 218 41.3
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 4.8e-39 165.6 251 43.4
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.8e-39 165.6 210 42.9
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.1e-38 164.5 260 45.0
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 3.1e-38 162.9 210 48.1
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 6.9e-38 161.8 255 39.2
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.0e-37 160.2 242 39.3
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 2.6e-37 159.8 246 41.5
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 5.8e-37 158.7 227 36.6
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 9.9e-37 157.9 245 38.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.3e-36 157.5 252 43.3
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 3.8e-36 156.0 215 41.9
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 4.9e-36 155.6 256 41.4
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 4.9e-36 155.6 256 41.4
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 4.9e-36 155.6 256 41.4
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.4e-35 154.1 217 41.5
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 2.5e-35 153.3 256 41.0
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.5e-35 153.3 206 42.2
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 4.2e-35 152.5 272 39.0
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 5.5e-35 152.1 221 43.4
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 1.2e-34 151.0 197 44.2
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.2e-34 151.0 230 36.1
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.2e-34 151.0 180 45.0
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 7.9e-34 148.3 187 41.7
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 7.9e-34 148.3 187 41.7
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.3e-33 147.5 216 40.7
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 5.1e-33 145.6 290 35.2
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.1e-32 144.4 187 41.7
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.5e-32 144.1 246 37.8
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 4.3e-32 142.5 203 41.9
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 9.6e-32 141.4 240 37.9
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 4.8e-31 139.0 197 41.6
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 1.8e-30 137.1 153 47.7
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 2.4e-30 136.7 158 45.6
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 2.4e-30 136.7 214 39.3
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 4.0e-30 136.0 158 45.6
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 4.0e-30 136.0 158 45.6
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 4.0e-30 136.0 159 46.5
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 4.0e-30 136.0 205 43.4
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 2.0e-29 133.7 218 41.7
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.7e-28 130.6 112 54.5
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 1.7e-28 130.6 238 34.0
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 6.7e-25 118.6 165 50.9
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 4.1e-22 109.4 150 46.0
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 4.5e-21 105.9 224 36.6
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 8.5e-20 101.7 230 29.6
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.5e-19 100.1 235 34.0
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 2.5e-16 90.1 101 51.5
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.2e-10 71.2 50 66.0
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 7.4e-08 62.0 104 33.7
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.7e-07 60.8 116 32.8


User provided reference genes

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