Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17384 Selenicereus undatus HOM05D005364 ORTHO05D006554 5.7e-118 427.6 211 100.0
AUR62026796 Chenopodium quinoa HOM05D005364 ORTHO05D006554 2.4e-76 289.3 222 66.2
AUR62013475 Chenopodium quinoa HOM05D005364 ORTHO05D006554 6.0e-75 284.6 222 64.4
Ah.05g169340 Amaranthus hybridus HOM05D005364 ORTHO05D006554 7.6e-70 267.7 225 61.3
Hund26737 Selenicereus undatus HOM05D008449 ORTHO05D010615 1.2e-67 260.4 256 57.4
QL09p029051 Quercus lobata HOM05D005364 ORTHO05D006554 3.5e-67 258.8 222 60.4
Sc15g0007440 Simmondsia chinensis HOM05D001552 ORTHO05D003294 3.9e-66 255.4 225 60.4
GSVIVG01010009001 Vitis vinifera HOM05D005364 ORTHO05D006554 6.6e-66 254.6 218 60.6
Dinv25792 Davidia involucrata HOM05D005364 ORTHO05D006554 8.7e-66 254.2 223 60.5
Thecc.08G141100 Theobroma cacao HOM05D005364 ORTHO05D006554 2.5e-65 252.7 220 58.2
Cfa018384 Carpinus fangiana HOM05D005364 ORTHO05D006554 4.3e-65 251.9 221 58.8
Lj4C689G10 Lonicera japonica HOM05D005364 ORTHO05D006554 7.3e-65 251.1 187 66.8
Haze_17688 Corylus avellana HOM05D005364 ORTHO05D006554 9.6e-65 250.8 221 58.8
Hma1.2p1_0107F.1_g051330 Hydrangea macrophylla HOM05D005364 ORTHO05D006554 3.6e-64 248.8 206 61.7
Migut.C01101 Erythranthe guttata HOM05D005364 ORTHO05D006554 6.2e-64 248.1 224 55.8
Eucgr.F02755 Eucalyptus grandis HOM05D005364 ORTHO05D006554 6.2e-64 248.1 220 57.7
TWI34G0076 Tripterygium wilfordii HOM05D005364 ORTHO05D006554 8.1e-64 247.7 207 59.4
Gorai.005G083600 Gossypium raimondii HOM05D005364 ORTHO05D006554 1.1e-63 247.3 209 58.9
MSTRG.1383 Avicennia marina HOM05D005364 ORTHO05D006554 2.4e-63 246.1 222 56.8
Potri.005G186600 Populus trichocarpa HOM05D005364 ORTHO05D006554 2.4e-63 246.1 211 59.7
COL.COLO4_33812 Corchorus olitorius HOM05D005364 ORTHO05D006554 4.0e-63 245.4 205 60.5
Gohir.D02G074200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 9.0e-63 244.2 209 57.9
DCAR_001119 Daucus carota HOM05D005364 ORTHO05D006554 1.5e-62 243.4 187 63.6
TAR628G1468 Trochodendron aralioides HOM05D005364 ORTHO05D006554 2.6e-62 242.7 205 60.5
Atru.chr13.1665 Acer truncatum HOM05D005364 ORTHO05D006554 4.5e-62 241.9 220 57.3
Manes.18G085705 Manihot esculenta HOM05D005364 ORTHO05D006554 5.8e-62 241.5 207 59.4
Solyc04g064560.4 Solanum lycopersicum HOM05D005364 ORTHO05D006554 7.6e-62 241.1 222 55.0
Prupe.8G016300 Prunus persica HOM05D005364 ORTHO05D006554 9.9e-62 240.7 214 56.1
SalBow7G3071 Salvia bowleyana HOM05D005364 ORTHO05D006554 9.9e-62 240.7 230 54.3
SGA_v2.0_scaffold24G10388 Striga asiatica HOM05D005364 ORTHO05D006554 9.9e-62 240.7 222 56.8
Actinidia03441 Actinidia chinensis HOM05D005364 ORTHO05D006554 1.7e-61 240.0 207 58.0
Sopen04g026510 Solanum pennellii HOM05D005364 ORTHO05D006554 2.2e-61 239.6 222 54.5
Sabra05G0142500 Salix brachista HOM05D005364 ORTHO05D006554 3.8e-61 238.8 208 58.2
CAN.G657.4 Capsicum annuum HOM05D005364 ORTHO05D006554 6.4e-61 238.0 211 57.3
Duzib041G0781 Durio zibethinus HOM05D005364 ORTHO05D006554 8.4e-61 237.7 209 56.9
Nitab4.5_0007147g0010 Nicotiana tabacum HOM05D005364 ORTHO05D006554 8.4e-61 237.7 221 56.1
Peaxi162Scf00066g01936 Petunia axillaris HOM05D005364 ORTHO05D006554 1.4e-60 236.9 214 56.1
ECA232G1379 Erigeron canadensis HOM05D005364 ORTHO05D006554 1.9e-60 236.5 201 55.7
Nitab4.5_0000174g0280 Nicotiana tabacum HOM05D005364 ORTHO05D006554 3.2e-60 235.7 221 56.1
Glyma.14G119200 Glycine max HOM05D005364 ORTHO05D006554 9.3e-60 234.2 225 53.3
VMungo0647G2252 Vigna mungo HOM05D005364 ORTHO05D006554 1.6e-59 233.4 217 53.9
CSS0048679 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 2.1e-59 233.0 217 57.1
RcHm_v2.0_Chr6g0277571 Rosa chinensis HOM05D005364 ORTHO05D006554 2.1e-59 233.0 225 55.1
CSS0030633 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 4.6e-59 231.9 211 56.4
Cc10_g13140 Coffea canephora HOM05D005364 ORTHO05D006554 4.6e-59 231.9 213 58.2
CSS0018960 Camellia sinensis var. sinensis HOM05D005364 ORTHO05D006554 6.0e-59 231.5 209 57.9
Ciclev10000720m.g Citrus clementina HOM05D005364 ORTHO05D006554 7.9e-59 231.1 195 59.0
CANSAT25G0570 Cannabis sativa HOM05D005364 ORTHO05D006554 1.0e-58 230.7 216 55.6
CiPaw.15G022800 Carya illinoinensis HOM05D005364 ORTHO05D006554 1.8e-58 229.9 208 57.2
Nn5g28547 Nelumbo nucifera HOM05D005364 ORTHO05D006554 1.8e-58 229.9 223 55.2
PGR142G4297 Punica granatum HOM05D005364 ORTHO05D006554 1.8e-58 229.9 220 55.9
MD05G1011300 Malus domestica HOM05D005364 ORTHO05D006554 3.0e-58 229.2 218 54.1
HanXRQChr15g0484621 Helianthus annuus HOM05D005364 ORTHO05D006554 8.7e-58 227.6 214 53.7
Lsat_1_v5_gn_9_124401 Lactuca sativa HOM05D005364 ORTHO05D006554 1.5e-57 226.9 210 55.2
Phvul.001G064400 Phaseolus vulgaris HOM05D005364 ORTHO05D006554 1.5e-57 226.9 221 51.6
Lj1g0018455 Lotus japonicus HOM05D005364 ORTHO05D006554 1.9e-57 226.5 207 53.6
FAN20G2210 Fragaria x ananassa HOM05D005364 ORTHO05D006554 4.3e-57 225.3 209 55.0
MD10G1011100 Malus domestica HOM05D005364 ORTHO05D006554 4.3e-57 225.3 217 52.5
MBI03_g35292_MAGBIO Magnolia biondii HOM05D005364 ORTHO05D006554 5.6e-57 224.9 218 56.4
FAN15G1836 Fragaria x ananassa HOM05D005364 ORTHO05D006554 7.4e-57 224.6 209 55.0
Rhsim11G0077000 Rhododendron simsii HOM05D005364 ORTHO05D006554 2.1e-56 223.0 201 57.7
Sed0004836 Sechium edule HOM05D005364 ORTHO05D006554 2.1e-56 223.0 220 53.2
Psat6g039520 Pisum sativum HOM05D005364 ORTHO05D006554 4.8e-56 221.9 225 50.2
Medtr1g029410 Medicago truncatula HOM05D005364 ORTHO05D006554 6.2e-56 221.5 225 51.6
CDE02G4564 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 8.1e-56 221.1 206 58.3
Lalb_Chr06g0173651 Lupinus albus HOM05D005364 ORTHO05D006554 8.1e-56 221.1 212 52.8
FvH4_2g15020 Fragaria vesca HOM05D005364 ORTHO05D006554 1.1e-55 220.7 209 54.5
Aqoxy6G00357 Aquilegia oxysepala HOM05D005364 ORTHO05D006554 1.4e-55 220.3 208 55.3
FAN27G1309 Fragaria x ananassa HOM05D005364 ORTHO05D006554 1.8e-55 219.9 209 54.1
Lalb_Chr25g0281671 Lupinus albus HOM05D005364 ORTHO05D006554 4.0e-55 218.8 222 50.0
PSO541G2378 Papaver somniferum HOM05D005364 ORTHO05D006554 1.2e-54 217.2 172 62.8
BraA06t26562Z Brassica rapa HOM05D005364 ORTHO05D006554 2.6e-54 216.1 207 56.0
ATR0138G016 Amborella trichopoda HOM05D005364 ORTHO05D006554 3.4e-54 215.7 199 57.3
Aa31LG11G4810 Aethionema arabicum HOM05D005364 ORTHO05D006554 4.5e-54 215.3 205 55.1
Carub.0006s2357 Capsella rubella HOM05D005364 ORTHO05D006554 4.5e-54 215.3 204 55.4
A06p36390 Brassica napus HOM05D005364 ORTHO05D006554 5.8e-54 214.9 208 55.8
MELO3C010582.2 Cucumis melo HOM05D005364 ORTHO05D006554 5.8e-54 214.9 204 56.9
Thhalv10003904m.g Eutrema salsugineum HOM05D005364 ORTHO05D006554 7.6e-54 214.5 207 55.1
FAN24G1520 Fragaria x ananassa HOM05D005364 ORTHO05D006554 7.6e-54 214.5 214 53.3
THA.LOC104798861 Tarenaya hassleriana HOM05D005364 ORTHO05D006554 7.6e-54 214.5 218 53.7
ClCG08G002730 Citrullus lanatus HOM05D005364 ORTHO05D006554 1.0e-53 214.2 204 56.9
PSO675G4293 Papaver somniferum HOM05D005364 ORTHO05D006554 1.0e-53 214.2 173 62.4
CsaV3_6G035590 Cucumis sativus L. HOM05D005364 ORTHO05D006554 2.9e-53 212.6 203 55.7
Ca_12657_v3 Cicer arietinum L. HOM05D005364 ORTHO05D003291 1.1e-52 210.7 225 48.4
Gohir.A02G068200 Gossypium hirsutum HOM05D005364 ORTHO05D006554 1.9e-52 209.9 156 63.5
Sp2g21830 Schrenkiella parvula HOM05D005364 ORTHO05D006554 7.1e-52 208.0 202 55.4
AT5G25800 Arabidopsis thaliana HOM05D005364 ORTHO05D006554 2.7e-51 206.1 218 50.0
Oeu001555.1 Olea europaea HOM05D005364 ORTHO05D006554 2.7e-51 206.1 156 63.5
TPR.G33326 Trifolium pratense HOM05D005364 ORTHO05D006554 4.6e-51 205.3 224 48.7
AL6G37660 Arabidopsis lyrata HOM05D005364 ORTHO05D006554 6.0e-51 204.9 207 53.6
BcaB07g29980 Brassica carinata HOM05D005364 ORTHO05D006554 7.9e-51 204.5 206 51.5
C07p42120 Brassica napus HOM05D005364 ORTHO05D006554 7.9e-51 204.5 207 53.1
Glyma.13G037300 Glycine max HOM05D005364 ORTHO05D006554 7.9e-51 204.5 157 62.4
arahy.Tifrunner.gnm1.ann1.3V9M2M Arachis hypogaea HOM05D005364 ORTHO05D006554 2.3e-50 203.0 211 52.1
Zm00001eb138630 Zea mays HOM05D005364 ORTHO05D006554 2.3e-50 203.0 173 60.1
A02p39590 Brassica napus HOM05D005364 ORTHO05D006554 3.0e-50 202.6 208 51.9
BcaNung04840 Brassica carinata HOM05D005364 ORTHO05D006554 3.9e-50 202.2 206 53.4
BcaC03g17892 Brassica carinata HOM05D005364 ORTHO05D006554 5.1e-50 201.8 205 51.2
Zm00001eb409200 Zea mays HOM05D005364 ORTHO05D006554 6.7e-50 201.4 212 51.4
C02p59350 Brassica napus HOM05D005364 ORTHO05D006554 1.5e-49 200.3 205 51.2
BcaNung03925 Brassica carinata HOM05D005364 ORTHO05D006554 1.9e-49 199.9 207 52.2
CARHR187620 Cardamine hirsuta HOM05D005364 ORTHO05D006554 9.6e-49 197.6 208 49.5
BolC2t11997H Brassica oleracea HOM05D005364 ORTHO05D006554 1.6e-48 196.8 207 50.7
BolC7t44743H Brassica oleracea HOM05D005364 ORTHO05D006554 6.2e-48 194.9 209 51.7
BraA02t08927Z Brassica rapa HOM05D005364 ORTHO05D006554 6.2e-48 194.9 211 50.7
Os12g0188900 Oryza sativa ssp. japonica HOM05D005364 ORTHO05D006554 5.3e-47 191.8 174 55.2
vmacro00886 Vaccinium macrocarpon HOM05D005364 ORTHO05D006554 2.9e-45 186.0 315 38.1
HPP92_021466 Vanilla planifolia HOM05D005364 ORTHO05D006554 3.5e-43 179.1 171 53.8
CDE08G0765 Ceratophyllum demersum HOM05D005364 ORTHO05D006554 1.3e-42 177.2 193 51.3
HPP92_019394 Vanilla planifolia HOM05D005364 ORTHO05D006554 2.3e-42 176.4 171 54.4
HPP92_019395 Vanilla planifolia HOM05D005364 ORTHO05D006554 3.9e-42 175.6 171 53.2
Dinv41138 Davidia involucrata HOM05D005364 ORTHO05D006554 4.2e-36 155.6 198 48.5
DCAR_010238 Daucus carota HOM05D005364 ORTHO05D006554 7.2e-36 154.8 205 44.9
Pp3c1_5030 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.1e-33 147.5 238 40.3
SEGI_12292 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 2.6e-30 136.3 91 65.9
AagrBONN_evm.TU.Sc2ySwM_344.2478 Anthoceros agrestis HOM05D005364 ORTHO05D006554 4.5e-30 135.6 231 38.1
Mapoly0062s0092 Marchantia polymorpha HOM05D005364 ORTHO05D006554 5.9e-30 135.2 259 33.6
Pp3c7_16700 Physcomitrium patens HOM05D005364 ORTHO05D006554 1.4e-26 124.0 198 39.4
Sc15g0007420 Simmondsia chinensis HOM05D005364 ORTHO05D006554 2.2e-24 116.7 99 60.6
CBR_g39514 Chara braunii HOM05D005364 ORTHO05D006554 8.0e-19 98.2 198 31.8
EL10Ac1g01440 Beta vulgaris HOM05D005364 ORTHO05D006554 5.7e-17 92.0 52 76.9
HanXRQChr16g0503811 Helianthus annuus HOM05D005364 ORTHO05D006554 9.4e-12 74.7 55 58.2
SHI09270 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-11 73.2 49 67.3
SEGI_36407 Sequoiadendron giganteum HOM05D005364 ORTHO05D006554 3.1e-07 59.7 57 52.6
PRCOL_00002441 Prasinoderma coloniale HOM05D005364 ORTHO05D006554 4.1e-07 59.3 156 28.2


User provided reference genes

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