Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17367 Selenicereus undatus HOM05D002903 ORTHO05D003066 9.2e-201 703.7 467 100.0
EL10Ac1g01404 Beta vulgaris HOM05D002903 ORTHO05D003066 2.4e-60 237.3 447 49.7
AUR62007679 Chenopodium quinoa HOM05D002903 ORTHO05D003066 1.6e-51 208.0 456 44.7
AUR62013459 Chenopodium quinoa HOM05D002903 ORTHO05D003066 1.3e-45 188.3 451 42.6
Hund26764 Selenicereus undatus HOM05D002903 ORTHO05D003066 2.1e-40 171.0 443 45.4
Sc26g0002820 Simmondsia chinensis HOM05D002903 ORTHO05D003066 1.0e-29 135.6 416 30.8
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 4.8e-16 90.1 185 37.8
Eucgr.F02770 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.1e-15 89.0 175 36.6
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.1e-15 89.0 194 37.6
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.1e-15 89.0 194 37.6
CiPaw.15G024600 Carya illinoinensis HOM05D002903 ORTHO05D003066 4.1e-15 87.0 174 35.6
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 5.3e-15 86.7 181 36.5
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 9.0e-15 85.9 181 37.6
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 1.2e-14 85.5 189 34.4
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 1.2e-14 85.5 174 36.8
Haze_17666 Corylus avellana HOM05D002903 ORTHO05D003066 1.5e-14 85.1 177 37.3
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 2.6e-14 84.3 173 35.8
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 3.4e-14 84.0 178 32.0
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 5.9e-14 83.2 175 36.0
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 7.7e-14 82.8 182 34.6
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 1.0e-13 82.4 193 36.8
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 1.0e-13 82.4 170 36.5
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 1.7e-13 81.6 189 34.4
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 2.2e-13 81.3 162 35.2
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 2.9e-13 80.9 184 34.2
PGSC0003DMG400013037 Solanum tuberosum HOM05D002903 ORTHO05D003066 2.9e-13 80.9 158 36.1
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 3.8e-13 80.5 185 37.3
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 5.0e-13 80.1 155 32.9
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 6.5e-13 79.7 202 34.7
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 6.5e-13 79.7 168 33.9
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 6.5e-13 79.7 177 34.5
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 6.5e-13 79.7 191 37.2
Lj7P356T43 Lonicera japonica HOM05D002903 ORTHO05D003066 6.5e-13 79.7 160 35.0
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 8.5e-13 79.3 187 32.6
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 8.5e-13 79.3 171 35.1
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.1e-12 79.0 166 36.1
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 1.1e-12 79.0 182 38.5
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 1.4e-12 78.6 178 34.3
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 1.9e-12 78.2 153 32.7
MSTRG.1394 Avicennia marina HOM05D002903 ORTHO05D003066 3.2e-12 77.4 174 35.1
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 3.2e-12 77.4 184 34.8
Cfa018400 Carpinus fangiana HOM05D002903 ORTHO05D003066 7.2e-12 76.3 188 34.6
Gohir.A05G240200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 7.2e-12 76.3 165 35.2
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 7.2e-12 76.3 169 36.1
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 9.4e-12 75.9 192 33.3
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 9.4e-12 75.9 182 40.1
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 1.2e-11 75.5 132 42.4
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.2e-11 75.5 184 34.2
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 1.2e-11 75.5 177 39.0
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 1.6e-11 75.1 189 32.3
Phvul.009G132400 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 2.1e-11 74.7 175 36.6
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 2.1e-11 74.7 193 35.8
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 2.7e-11 74.3 180 36.7
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.7e-11 74.3 168 39.9
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 2.7e-11 74.3 177 36.2
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 3.6e-11 73.9 160 39.4
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 3.6e-11 73.9 187 33.2
Gorai.009G250800 Gossypium raimondii HOM05D002903 ORTHO05D003066 3.6e-11 73.9 166 34.9
VMungo1309G2413 Vigna mungo HOM05D002903 ORTHO05D003066 3.6e-11 73.9 174 33.3
MSTRG.25346 Avicennia marina HOM05D002903 ORTHO05D003066 4.6e-11 73.6 172 33.7
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 4.6e-11 73.6 184 33.7
Gohir.D05G241400 Gossypium hirsutum HOM05D002903 ORTHO05D003066 4.6e-11 73.6 173 35.8
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 6.1e-11 73.2 187 35.3
Lalb_Chr08g0240931 Lupinus albus HOM05D002903 ORTHO05D003066 6.1e-11 73.2 190 34.2
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 7.9e-11 72.8 178 33.7
Potri.005G185200 Populus trichocarpa HOM05D002903 ORTHO05D003066 1.0e-10 72.4 182 37.9
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 1.4e-10 72.0 185 36.8
Solyc08g080860.4 Solanum lycopersicum HOM05D002903 ORTHO05D003066 1.4e-10 72.0 186 30.6
AL1G34490 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 2.3e-10 71.2 163 31.3
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 2.3e-10 71.2 182 34.1
Ca_16630_v3 Cicer arietinum L. HOM05D002903 ORTHO05D003066 2.3e-10 71.2 178 33.1
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 2.3e-10 71.2 167 34.7
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.3e-10 71.2 167 34.7
Oeu045975.1 Olea europaea HOM05D002903 ORTHO05D003066 2.3e-10 71.2 172 36.6
Sopen08g029160 Solanum pennellii HOM05D002903 ORTHO05D003066 2.3e-10 71.2 187 30.5
Migut.N03253 Erythranthe guttata HOM05D002903 ORTHO05D003066 3.0e-10 70.9 52 67.3
Nitab4.5_0002270g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 3.0e-10 70.9 187 38.0
PGR044G0841 Punica granatum HOM05D002903 ORTHO05D003066 3.0e-10 70.9 184 36.4
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 5.1e-10 70.1 160 35.0
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 6.7e-10 69.7 177 33.3
Glyma.04G243500 Glycine max HOM05D002903 ORTHO05D003066 8.8e-10 69.3 184 33.2
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.1e-09 68.9 179 33.0
Atru.chr13.1637 Acer truncatum HOM05D002903 ORTHO05D003066 2.0e-09 68.2 169 37.9
MD10G1007900 Malus domestica HOM05D002903 ORTHO05D003066 2.0e-09 68.2 189 37.6
Oeu047153.1 Olea europaea HOM05D002903 ORTHO05D003066 2.0e-09 68.2 188 31.4
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.5e-09 67.8 168 35.7
PGSC0003DMG400012217 Solanum tuberosum HOM05D002903 ORTHO05D003066 2.5e-09 67.8 175 30.3
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 3.3e-09 67.4 182 33.5
Lsat_1_v5_gn_1_9061 Lactuca sativa HOM05D002903 ORTHO05D003066 3.3e-09 67.4 200 29.0
Actinidia12224 Actinidia chinensis HOM05D002903 ORTHO05D003066 4.3e-09 67.0 169 34.9
BcaC05g26046 Brassica carinata HOM05D002903 ORTHO05D003066 4.3e-09 67.0 190 33.2
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 5.7e-09 66.6 166 33.7
AT1G21390 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 5.7e-09 66.6 184 30.4
Lj1g0027406 Lotus japonicus HOM05D002903 ORTHO05D003066 7.4e-09 66.2 183 29.5
Carub.0001s2080 Capsella rubella HOM05D002903 ORTHO05D003066 1.3e-08 65.5 190 30.5
Thhalv10008635m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 1.3e-08 65.5 166 31.9
MD05G1009200 Malus domestica HOM05D002903 ORTHO05D003066 1.3e-08 65.5 193 34.7
THA.LOC104813698 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 1.3e-08 65.5 128 38.3
A06p17430 Brassica napus HOM05D000744 ORTHO05D000332 2.2e-08 64.7 186 32.8
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 2.2e-08 64.7 190 31.6
Prupe.8G011500 Prunus persica HOM05D002903 ORTHO05D003066 2.2e-08 64.7 121 63.6
TWI32G0321 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 2.2e-08 64.7 175 39.4
vmacro00875 Vaccinium macrocarpon HOM05D002903 ORTHO05D003066 2.2e-08 64.7 135 34.8
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.8e-08 64.3 171 31.6
BcaC08g45488 Brassica carinata HOM05D000744 ORTHO05D000332 2.8e-08 64.3 184 32.1
BolC6t38286H Brassica oleracea HOM05D002903 ORTHO05D003066 2.8e-08 64.3 184 32.1
BraA06t24841Z Brassica rapa HOM05D002903 ORTHO05D003066 3.7e-08 63.9 185 30.3
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 3.7e-08 63.9 168 33.3
C05p20270 Brassica napus HOM05D000744 ORTHO05D000332 4.8e-08 63.5 192 31.2
BolC5t30721H Brassica oleracea HOM05D002903 ORTHO05D003066 4.8e-08 63.5 192 31.2
MBI06_g27454_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 4.8e-08 63.5 179 30.2
PGR102G0277 Punica granatum HOM05D002903 ORTHO05D003066 4.8e-08 63.5 172 39.5
C06p31570 Brassica napus HOM05D000744 ORTHO05D000332 8.2e-08 62.8 185 31.4
PGR042G1875 Punica granatum HOM05D002903 ORTHO05D003066 8.2e-08 62.8 183 31.7
QL10p043057 Quercus lobata HOM05D002903 ORTHO05D003066 8.2e-08 62.8 187 35.8
Sp1g18940 Schrenkiella parvula HOM05D002903 ORTHO05D003066 8.2e-08 62.8 196 29.6
Eucgr.J01342 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.1e-07 62.4 52 51.9
Oeu004513.1 Olea europaea HOM05D002903 ORTHO05D003066 1.1e-07 62.4 152 30.3
THA.LOC104812056 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 1.1e-07 62.4 189 32.3
TPR.G6299 Trifolium pratense HOM05D002903 ORTHO05D003066 1.1e-07 62.4 45 66.7
arahy.Tifrunner.gnm1.ann1.I47HGM Arachis hypogaea HOM05D002903 ORTHO05D003066 1.4e-07 62.0 47 63.8
A07p28150 Brassica napus HOM05D002903 ORTHO05D003066 1.4e-07 62.0 185 30.8
BraA07t30459Z Brassica rapa HOM05D000744 ORTHO05D003066 1.4e-07 62.0 185 30.8
Medtr3g088815 Medicago truncatula HOM05D002903 ORTHO05D003066 1.4e-07 62.0 170 41.8
Psat5g083880 Pisum sativum HOM05D002903 ORTHO05D003066 1.4e-07 62.0 173 45.7
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 1.4e-07 62.0 203 32.5
TPR.G30561 Trifolium pratense HOM05D002903 ORTHO05D003066 1.4e-07 62.0 122 34.4
Migut.H00687 Erythranthe guttata HOM05D002903 ORTHO05D003066 1.8e-07 61.6 52 59.6
Eucgr.J01339 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.8e-07 61.6 139 47.5
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 1.8e-07 61.6 180 31.1
Rhsim08G0001600 Rhododendron simsii HOM05D002903 ORTHO05D003066 1.8e-07 61.6 164 34.8
Aqoxy1G01928 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 2.4e-07 61.2 46 60.9
arahy.Tifrunner.gnm1.ann1.Y173KB Arachis hypogaea HOM05D002903 ORTHO05D003066 2.4e-07 61.2 51 60.8
ECA234G1033 Erigeron canadensis HOM05D002903 ORTHO05D003066 2.4e-07 61.2 46 65.2
PSO170G2097 Papaver somniferum HOM05D002903 ORTHO05D003066 2.4e-07 61.2 204 35.3
Sed0028073 Sechium edule HOM05D002903 ORTHO05D003066 2.4e-07 61.2 156 30.8
BcaB02g07090 Brassica carinata HOM05D002903 ORTHO05D003066 3.1e-07 60.8 189 29.1
BcaC05g26048 Brassica carinata HOM05D002903 ORTHO05D003066 3.1e-07 60.8 57 54.4
BolC6t40142H Brassica oleracea HOM05D002903 ORTHO05D003066 3.1e-07 60.8 184 29.3
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 3.1e-07 60.8 174 31.0
PSO528G0269 Papaver somniferum HOM05D002903 ORTHO05D003066 3.1e-07 60.8 205 36.6
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 3.1e-07 60.8 159 32.1
Thecc.01G134700 Theobroma cacao HOM05D002903 ORTHO05D003066 3.1e-07 60.8 162 38.3
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 4.1e-07 60.5 182 34.6
Lj1g0005014 Lotus japonicus HOM05D002903 ORTHO05D003066 4.1e-07 60.5 183 31.7
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 4.1e-07 60.5 162 32.1
Potri.007G104500 Populus trichocarpa HOM05D002903 ORTHO05D003066 4.1e-07 60.5 60 51.7
Thhalv10019082m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 5.3e-07 60.1 193 30.6
ClCG08G003270 Citrullus lanatus HOM05D002903 ORTHO05D003066 6.9e-07 59.7 169 29.0
COL.COLO4_35772 Corchorus olitorius HOM05D002903 ORTHO05D003066 6.9e-07 59.7 187 34.8
HanXRQChr10g0309091 Helianthus annuus HOM05D002903 ORTHO05D003066 6.9e-07 59.7 187 30.5
SalBow6G1573 Salvia bowleyana HOM05D002903 ORTHO05D003066 6.9e-07 59.7 54 59.3
SalBow7G1710 Salvia bowleyana HOM05D002903 ORTHO05D003066 6.9e-07 59.7 153 34.0
SGA_v2.0_scaffold48G17917 Striga asiatica HOM05D002903 ORTHO05D003066 6.9e-07 59.7 47 59.6
Actinidia10680 Actinidia chinensis HOM05D000744 ORTHO05D000332 9.1e-07 59.3 153 31.4
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 9.1e-07 59.3 180 29.4
Peaxi162Scf00119g00051 Petunia axillaris HOM05D002903 ORTHO05D003066 9.1e-07 59.3 52 53.8
Rhsim11G0074400 Rhododendron simsii HOM05D002903 ORTHO05D003066 9.1e-07 59.3 58 51.7
TWI79G0835 Tripterygium wilfordii HOM05D000001 ORTHO05D010162 9.1e-07 59.3 181 40.3
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 1.2e-06 58.9 180 28.9
A07p42590 Brassica napus HOM05D000744 ORTHO05D000332 1.5e-06 58.5 57 45.6
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.5e-06 58.5 168 32.1
Gorai.012G036500 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.5e-06 58.5 182 31.3
TWI75G0819 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 1.5e-06 58.5 61 50.8
Carub.0002s2388 Capsella rubella HOM05D002903 ORTHO05D003066 2.0e-06 58.2 187 29.4
Gohir.D04G032100 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.0e-06 58.2 182 31.3
unitig_61.g26061 Utricularia gibba HOM05D002903 ORTHO05D003066 2.0e-06 58.2 43 65.1
Duzib187G0480 Durio zibethinus HOM05D002903 ORTHO05D003066 3.4e-06 57.4 186 36.6
Sabra05G0053700 Salix brachista HOM05D002903 ORTHO05D003066 4.5e-06 57.0 63 47.6
BcaC08g47201 Brassica carinata HOM05D002903 ORTHO05D003066 5.9e-06 56.6 184 28.8
CARHR070490 Cardamine hirsuta HOM05D002903 ORTHO05D003066 5.9e-06 56.6 189 31.7
Prupe.4G272900 Prunus persica HOM05D002903 ORTHO05D003066 5.9e-06 56.6 158 29.7
AL2G37140 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.7e-06 56.2 189 31.2
AL402U10010 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.7e-06 56.2 189 31.2
Sp5g32140 Schrenkiella parvula HOM05D002903 ORTHO05D003066 7.7e-06 56.2 195 29.2
Thecc.06G085300 Theobroma cacao HOM05D002903 ORTHO05D003066 7.7e-06 56.2 47 57.4
Thecc.06G085500 Theobroma cacao HOM05D002903 ORTHO05D003066 7.7e-06 56.2 47 57.4
Thecc.06G085900 Theobroma cacao HOM05D002903 ORTHO05D003066 7.7e-06 56.2 47 57.4


User provided reference genes

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