Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 3.2e-192 674.9 327 100.0
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 2.1e-175 619.0 325 88.3
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.2e-169 599.0 328 86.9
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.2e-168 594.0 327 84.7
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.6e-167 591.3 327 84.1
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 4.5e-162 574.7 326 83.4
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 4.2e-160 568.2 326 81.6
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 3.6e-159 565.1 326 81.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 3.6e-159 565.1 326 81.9
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.4e-158 563.1 326 81.0
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.3e-158 562.4 326 81.6
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 3.0e-158 562.0 326 81.3
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.0e-157 559.3 315 83.8
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.0e-157 559.3 315 83.8
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.0e-157 559.3 326 81.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.6e-157 558.9 325 80.6
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 4.4e-157 558.1 326 80.7
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 5.7e-157 557.8 326 81.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.3e-156 556.6 326 80.7
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 1.7e-156 556.2 326 80.1
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.7e-156 555.1 325 80.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 4.8e-156 554.7 326 80.7
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 4.8e-156 554.7 326 79.8
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 8.2e-156 553.9 320 81.2
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.4e-155 553.1 324 79.3
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.8e-155 552.7 325 79.7
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 4.1e-155 551.6 326 79.8
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 5.3e-155 551.2 326 79.4
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 5.3e-155 551.2 324 79.0
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.0e-154 549.3 325 79.7
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.5e-154 548.5 327 78.6
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 3.5e-154 548.5 324 78.7
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 7.7e-154 547.4 326 79.1
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.0e-153 547.0 327 79.2
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.3e-153 546.6 326 78.2
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.2e-153 545.8 324 77.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.9e-153 545.4 325 79.1
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 3.8e-153 545.0 326 76.7
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.4e-152 543.1 326 77.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.9e-152 542.7 325 77.5
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 2.5e-152 542.3 326 78.2
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 3.2e-152 542.0 323 77.1
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.2e-152 540.8 327 78.3
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 7.2e-152 540.8 326 77.9
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 9.4e-152 540.4 325 77.2
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.2e-151 540.0 327 77.7
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.2e-151 540.0 325 77.8
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.2e-151 540.0 327 78.0
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.6e-151 539.7 327 78.3
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.1e-151 539.3 326 77.3
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 6.1e-151 537.7 327 77.7
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.1e-151 537.7 327 78.0
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.0e-150 537.0 327 78.3
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.0e-150 535.4 325 77.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 3.0e-150 535.4 323 76.5
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.3e-149 531.9 343 74.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.3e-149 531.9 335 75.8
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.2e-148 529.3 332 76.2
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 2.8e-148 528.9 327 76.8
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.8e-148 528.9 325 77.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.7e-148 528.5 339 75.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 8.2e-148 527.3 325 76.3
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.4e-147 526.6 326 77.0
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.8e-147 526.2 326 73.6
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.6e-146 523.1 326 77.6
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 2.0e-146 522.7 318 77.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 7.7e-146 520.8 326 74.8
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.7e-145 519.6 326 76.4
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.9e-145 518.8 331 75.2
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 3.8e-145 518.5 308 78.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 5.5e-144 514.6 325 74.2
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 7.2e-144 514.2 326 77.3
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 7.2e-144 514.2 325 74.2
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.7e-143 512.3 310 77.4
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.0e-142 508.8 297 78.5
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 5.2e-142 508.1 333 72.4
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.6e-141 505.8 325 73.2
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.4e-141 505.0 325 73.2
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 2.2e-140 502.7 325 72.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.4e-139 499.2 326 71.5
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.2e-138 496.9 313 74.1
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 1.3e-137 493.4 326 70.6
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 9.4e-136 487.3 326 70.9
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.0e-133 479.6 312 73.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.4e-131 473.4 326 70.2
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 9.1e-131 470.7 324 70.7
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.1e-128 463.8 326 68.1
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.9e-128 463.0 252 85.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.7e-127 458.4 323 65.3
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 8.0e-127 457.6 323 65.0
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-124 450.3 253 83.0
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 7.0e-123 444.5 251 82.5
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 7.0e-123 444.5 253 81.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 1.3e-121 440.3 306 66.3
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.5e-120 436.0 322 66.1
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 9.5e-120 434.1 304 64.8
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 8.0e-119 431.0 326 60.4
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 7.0e-115 417.9 306 61.1
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 9.2e-115 417.5 277 70.8
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.8e-111 406.0 241 78.0
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 6.2e-111 404.8 315 58.1
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 3.1e-110 402.5 252 74.6
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.7e-108 396.7 326 60.4
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.9e-99 366.7 218 80.7
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 5.2e-94 348.6 196 82.7
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 6.0e-90 335.1 310 51.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 6.0e-74 282.0 166 74.1
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 1.9e-64 250.4 144 83.3
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 6.3e-55 218.8 130 80.8
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 8.2e-47 191.8 303 39.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.5e-45 187.6 142 56.3
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.5e-45 186.0 287 36.6
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.0e-41 174.9 304 35.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.8e-41 174.1 115 70.4
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.3e-31 141.4 108 68.5
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 9.1e-30 135.2 78 83.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 3.5e-29 133.3 131 52.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 4.5e-29 132.9 85 64.7
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.5e-24 117.9 68 69.1
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.8e-23 113.6 78 64.1
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 5.0e-20 102.8 55 81.8
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 7.2e-19 99.0 72 63.9
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.0e-13 80.9 69 55.1
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.0e-09 68.6 40 70.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 8.9e-09 65.5 36 75.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 7.5e-08 62.4 62 53.2


User provided reference genes

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