Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17154 Selenicereus undatus HOM05D000473 ORTHO05D009707 4.4e-96 354.8 198 100.0
Ah.05g177400 Amaranthus hybridus HOM05D000473 ORTHO05D009707 7.2e-54 214.5 214 61.2
AUR62023334 Chenopodium quinoa HOM05D000473 ORTHO05D009707 1.2e-48 197.2 203 59.6
Sc26g0001940 Simmondsia chinensis HOM05D000473 ORTHO05D009707 1.3e-47 193.7 205 58.5
AUR62037999 Chenopodium quinoa HOM05D000473 ORTHO05D009707 3.8e-47 192.2 206 57.8
EL10Ac1g00688 Beta vulgaris HOM05D000473 ORTHO05D009707 2.7e-45 186.0 206 57.8
Peaxi162Scf00901g00418 Petunia axillaris HOM05D000473 ORTHO05D009707 6.5e-31 138.3 201 43.8
Cc02_g26130 Coffea canephora HOM05D000473 ORTHO05D009707 4.2e-30 135.6 206 49.5
CANSAT25G0711 Cannabis sativa HOM05D000473 ORTHO05D009707 7.2e-30 134.8 213 41.3
DCAR_029550 Daucus carota HOM05D000473 ORTHO05D009707 1.6e-29 133.7 206 42.7
Haze_02938 Corylus avellana HOM05D000473 ORTHO05D009707 2.7e-29 132.9 230 43.0
SalBow4G1553 Salvia bowleyana HOM05D000473 ORTHO05D009707 2.7e-29 132.9 200 46.5
Dinv43991 Davidia involucrata HOM05D000473 ORTHO05D009707 1.8e-28 130.2 237 40.9
QL04p023034 Quercus lobata HOM05D000473 ORTHO05D009707 4.0e-28 129.0 236 43.2
RcHm_v2.0_Chr1g0341261 Rosa chinensis HOM05D000473 ORTHO05D009707 5.2e-28 128.6 228 42.1
Aqoxy3G02396 Aquilegia oxysepala HOM05D000473 ORTHO05D009707 1.5e-27 127.1 198 47.5
Thecc.03G001200 Theobroma cacao HOM05D000473 ORTHO05D009707 1.5e-27 127.1 209 46.9
MSTRG.4978 Avicennia marina HOM05D000473 ORTHO05D009707 2.0e-27 126.7 222 44.1
FAN06G4525 Fragaria x ananassa HOM05D000473 ORTHO05D009707 3.3e-27 125.9 228 42.5
Actinidia05808 Actinidia chinensis HOM05D000473 ORTHO05D009707 5.7e-27 125.2 238 42.4
Atru.chr5.7 Acer truncatum HOM05D000473 ORTHO05D009707 9.7e-27 124.4 234 42.3
HanXRQChr06g0168381 Helianthus annuus HOM05D000473 ORTHO05D009707 9.7e-27 124.4 198 45.5
THA.LOC104820581 Tarenaya hassleriana HOM05D000473 ORTHO05D009707 9.7e-27 124.4 209 44.0
FvH4_7g08060 Fragaria vesca HOM05D000473 ORTHO05D009707 1.7e-26 123.6 228 41.2
CSS0050041 Camellia sinensis var. sinensis HOM05D000473 ORTHO05D009707 2.2e-26 123.2 193 44.6
Migut.N01695 Erythranthe guttata HOM05D000473 ORTHO05D009707 2.8e-26 122.9 208 45.2
FAN03G2202 Fragaria x ananassa HOM05D000473 ORTHO05D009707 2.8e-26 122.9 228 41.7
Lsat_1_v5_gn_7_10841 Lactuca sativa HOM05D000473 ORTHO05D009707 4.8e-26 122.1 203 38.4
COL.COLO4_19511 Corchorus olitorius HOM05D000473 ORTHO05D009707 1.4e-25 120.6 212 44.3
CiPaw.14G012600 Carya illinoinensis HOM05D000473 ORTHO05D009707 2.4e-25 119.8 205 45.4
Migut.O00618 Erythranthe guttata HOM05D000473 ORTHO05D009707 2.4e-25 119.8 208 44.7
Ciclev10024226m.g Citrus clementina HOM05D000473 ORTHO05D009707 3.1e-25 119.4 205 41.5
Manes.06G027700 Manihot esculenta HOM05D000473 ORTHO05D009707 7.0e-25 118.2 215 44.7
Eucgr.D01129 Eucalyptus grandis HOM05D000473 ORTHO05D009707 9.1e-25 117.9 221 42.1
PGSC0003DMG400006507 Solanum tuberosum HOM05D000473 ORTHO05D009707 1.2e-24 117.5 202 42.1
MD02G1236600 Malus domestica HOM05D000473 ORTHO05D009707 3.5e-24 115.9 272 39.0
Sopen10g012880 Solanum pennellii HOM05D000473 ORTHO05D009707 7.7e-24 114.8 202 38.6
TWI59G0462 Tripterygium wilfordii HOM05D000473 ORTHO05D009707 1.0e-23 114.4 205 41.0
Phvul.010G034132 Phaseolus vulgaris HOM05D000473 ORTHO05D009707 2.2e-23 113.2 214 37.4
Gohir.D08G049900 Gossypium hirsutum HOM05D000473 ORTHO05D009707 5.0e-23 112.1 217 37.8
Solyc10g039390.1 Solanum lycopersicum HOM05D000473 ORTHO05D009707 8.5e-23 111.3 202 36.6
Gorai.004G049500 Gossypium raimondii HOM05D000473 ORTHO05D009707 1.5e-22 110.5 217 37.3
PSO782G5244 Papaver somniferum HOM05D000473 ORTHO05D009707 1.5e-22 110.5 190 36.3
PGR083G2404 Punica granatum HOM05D000473 ORTHO05D009707 3.2e-22 109.4 211 37.0
PSO478G4603 Papaver somniferum HOM05D000473 ORTHO05D009707 4.2e-22 109.0 191 43.5
FAN01G3015 Fragaria x ananassa HOM05D000473 ORTHO05D009707 5.5e-22 108.6 267 35.2
Cpa.g.sc244.6 Carica papaya HOM05D000473 ORTHO05D009707 1.2e-21 107.5 243 42.0
BolC7t42166H Brassica oleracea HOM05D000473 ORTHO05D009707 1.6e-21 107.1 241 40.7
Medtr8g010540 Medicago truncatula HOM05D000473 ORTHO05D009707 2.1e-21 106.7 217 35.9
TPR.G9776 Trifolium pratense HOM05D000473 ORTHO05D009707 4.7e-21 105.5 211 40.3
Sp1g24930 Schrenkiella parvula HOM05D000473 ORTHO05D009707 6.1e-21 105.1 223 42.2
TAR629G3006 Trochodendron aralioides HOM05D000473 ORTHO05D009707 8.0e-21 104.8 231 36.4
BcaB03g13915 Brassica carinata HOM05D000473 ORTHO05D009707 1.8e-20 103.6 239 39.7
BcaC06g35390 Brassica carinata HOM05D000473 ORTHO05D009707 2.3e-20 103.2 243 39.5
A07p11010 Brassica napus HOM05D000473 ORTHO05D009707 2.3e-20 103.2 242 39.3
BraA07t28893Z Brassica rapa HOM05D000473 ORTHO05D009707 2.3e-20 103.2 242 39.3
Cfa010999 Carpinus fangiana HOM05D000473 ORTHO05D009707 2.3e-20 103.2 110 57.3
Prupe.2G108300 Prunus persica HOM05D000473 ORTHO05D009707 2.3e-20 103.2 248 36.3
Nitab4.5_0006577g0020 Nicotiana tabacum HOM05D000473 ORTHO05D009707 5.2e-20 102.1 114 46.5
Potri.014G178800 Populus trichocarpa HOM05D000473 ORTHO05D009707 6.8e-20 101.7 220 37.3
CARHR028180 Cardamine hirsuta HOM05D000473 ORTHO05D009707 2.6e-19 99.8 250 39.6
Thhalv10009467m.g Eutrema salsugineum HOM05D000473 ORTHO05D009707 2.6e-19 99.8 240 39.6
arahy.Tifrunner.gnm1.ann1.ZX076M Arachis hypogaea HOM05D000473 ORTHO05D009707 4.4e-19 99.0 207 37.7
Glyma.16G080400 Glycine max HOM05D000473 ORTHO05D009707 5.7e-19 98.6 238 37.8
Psat4g207440 Pisum sativum HOM05D000473 ORTHO05D009707 5.7e-19 98.6 210 41.4
Carub.0001s2718 Capsella rubella HOM05D000473 ORTHO05D009707 7.5e-19 98.2 240 36.2
AL1G42680 Arabidopsis lyrata HOM05D000473 ORTHO05D009707 2.2e-18 96.7 250 37.2
C07p16660 Brassica napus HOM05D000473 ORTHO05D009707 3.7e-18 95.9 240 37.5
Hma1.2p1_0466F.1_g158510 Hydrangea macrophylla HOM05D000473 ORTHO05D009707 3.7e-18 95.9 175 40.6
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 3.7e-18 95.9 212 40.1
unitig_748.g7132 Utricularia gibba HOM05D000473 ORTHO05D009707 3.7e-18 95.9 200 37.5
Lalb_Chr13g0290961 Lupinus albus HOM05D000473 ORTHO05D009707 4.8e-18 95.5 228 39.5
GSVIVG01026762001 Vitis vinifera HOM05D000473 ORTHO05D009707 8.3e-18 94.7 141 42.6
AT1G29000 Arabidopsis thaliana HOM05D000473 ORTHO05D009707 1.1e-17 94.4 258 33.3
Nitab4.5_0000166g0050 Nicotiana tabacum HOM05D000473 ORTHO05D009707 4.1e-17 92.4 192 41.7
Sabra14G0137100 Salix brachista HOM05D000473 ORTHO05D009707 1.2e-16 90.9 256 32.8
Sabra14G0138900 Salix brachista HOM05D000473 ORTHO05D009707 1.2e-16 90.9 255 31.4
unitig_5.g30997 Utricularia gibba HOM05D000473 ORTHO05D009707 1.6e-16 90.5 194 37.6
ClCG05G002650 Citrullus lanatus HOM05D000473 ORTHO05D009707 2.2e-15 86.7 206 38.3
Gohir.A08G039800 Gossypium hirsutum HOM05D000473 ORTHO05D009707 2.2e-15 86.7 194 40.2
arahy.Tifrunner.gnm1.ann1.ICQ4AW Arachis hypogaea HOM05D001159 ORTHO05D001712 1.1e-14 84.3 196 37.2
vmacro21107 Vaccinium macrocarpon HOM05D000473 ORTHO05D009707 1.5e-14 84.0 133 38.3
Lj9P610T27 Lonicera japonica HOM05D000473 ORTHO05D009707 1.2e-13 80.9 147 39.5
CsaV3_3G010100 Cucumis sativus L. HOM05D000473 ORTHO05D009707 2.1e-13 80.1 249 34.1
RhsimUnG0129000 Rhododendron simsii HOM05D000473 ORTHO05D009707 5.2e-12 75.5 182 33.0
Lj3g0020045 Lotus japonicus HOM05D000473 ORTHO05D009707 3.7e-10 69.3 154 39.6
ECA236G4293 Erigeron canadensis HOM05D000473 ORTHO05D009707 4.1e-09 65.9 185 29.7
Oeu036922.1 Olea europaea HOM05D000473 ORTHO05D009707 1.0e-07 61.2 90 50.0
ATR0561G238 Amborella trichopoda HOM05D000473 ORTHO05D001433 5.0e-07 58.9 222 36.0
CDE08G0768 Ceratophyllum demersum HOM05D000473 ORTHO05D001219 5.0e-07 58.9 215 31.6
MELO3C006231.2 Cucumis melo HOM05D000473 ORTHO05D009707 1.1e-06 57.8 246 32.1
Nn4g22255 Nelumbo nucifera HOM05D000473 ORTHO05D001433 1.5e-06 57.4 222 30.2
Lj3A1073T43 Lonicera japonica HOM05D000473 ORTHO05D001433 1.9e-06 57.0 202 31.2
Peaxi162Scf00753g00438 Petunia axillaris HOM05D000473 ORTHO05D001433 2.5e-06 56.6 210 29.5
Dinv17590 Davidia involucrata HOM05D000473 ORTHO05D001433 5.6e-06 55.5 203 28.6


User provided reference genes

Program Settings