Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 1.0e-229 799.7 395 100.0
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 1.9e-162 576.2 390 72.8
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 3.5e-161 572.0 389 71.7
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.9e-159 566.2 389 71.0
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 7.6e-156 554.3 389 68.6
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.8e-152 543.1 389 68.1
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 9.6e-151 537.3 388 66.5
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 8.1e-150 534.3 390 65.4
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.6e-148 529.3 387 65.6
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 1.4e-146 523.5 388 65.2
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.4e-146 522.7 388 66.5
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 3.2e-146 522.3 397 63.5
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.2e-145 520.4 387 65.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 1.6e-145 520.0 391 66.5
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 2.7e-145 519.2 389 64.3
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 3.5e-145 518.8 398 63.6
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.0e-144 517.3 387 64.6
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.0e-144 517.3 398 63.8
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 3.0e-144 515.8 390 65.9
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 8.7e-144 514.2 400 63.2
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.1e-143 513.8 391 62.9
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 1.5e-143 513.5 386 65.0
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 2.5e-143 512.7 389 64.5
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 2.5e-143 512.7 389 63.2
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.3e-143 512.3 388 62.9
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.3e-143 511.9 389 63.5
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 4.3e-143 511.9 391 64.2
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 4.3e-143 511.9 390 62.8
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 5.6e-143 511.5 388 64.9
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 5.6e-143 511.5 389 63.8
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 7.4e-143 511.1 388 62.6
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 9.6e-143 510.8 389 63.8
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 9.6e-143 510.8 390 63.1
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 1.3e-142 510.4 389 63.0
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 3.7e-142 508.8 391 63.4
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 6.2e-142 508.1 397 62.2
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 6.2e-142 508.1 388 63.9
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.4e-141 506.9 389 63.2
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.8e-141 506.5 391 63.2
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.8e-141 506.5 388 64.2
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 3.1e-141 505.8 389 64.8
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 4.0e-141 505.4 389 63.5
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.5e-140 503.4 389 64.3
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 2.0e-140 503.1 389 62.7
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 2.0e-140 503.1 386 65.5
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 4.5e-140 501.9 389 63.0
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 4.5e-140 501.9 386 61.7
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 5.8e-140 501.5 388 63.7
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 7.6e-140 501.1 391 62.4
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 1.3e-139 500.4 386 64.8
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 2.9e-139 499.2 386 61.7
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 2.9e-139 499.2 386 65.0
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.1e-138 497.3 386 60.9
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.9e-138 496.5 386 64.2
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 7.1e-138 494.6 386 64.5
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 9.3e-138 494.2 385 65.2
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.1e-137 493.0 397 61.2
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 4.6e-137 491.9 390 63.6
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 9.7e-135 484.2 389 61.7
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.6e-134 483.4 386 60.6
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 3.7e-134 482.3 374 61.0
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 3.7e-134 482.3 374 61.0
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 2.6e-132 476.1 391 60.4
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 4.5e-132 475.3 390 60.3
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 7.2e-130 468.0 392 58.7
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.6e-129 466.8 392 58.4
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 4.6e-129 465.3 387 59.4
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 2.3e-128 463.0 386 59.3
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 3.0e-128 462.6 395 59.5
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 3.0e-128 462.6 390 59.2
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 3.0e-128 462.6 390 59.2
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.9e-127 459.9 390 59.5
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 7.4e-127 458.0 390 59.2
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 6.3e-126 454.9 402 57.0
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 6.3e-126 454.9 373 59.0
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 6.3e-126 454.9 391 58.6
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.1e-125 454.1 388 59.0
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-125 453.8 402 56.5
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 1.8e-125 453.4 392 57.4
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 3.1e-125 452.6 389 58.6
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 6.9e-125 451.4 343 63.6
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 5.9e-124 448.4 385 58.4
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 2.9e-123 446.0 400 55.8
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 3.6e-121 439.1 392 54.8
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 5.3e-117 425.2 390 54.9
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 7.2e-114 414.8 379 54.4
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.3e-112 409.8 390 53.8
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.6e-111 406.4 369 55.6
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 3.3e-111 406.0 395 51.1
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 7.0e-109 398.3 314 63.1
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 3.6e-105 386.0 357 53.2
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.0e-104 384.4 364 54.7
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 2.6e-103 379.8 357 54.9
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.3e-101 372.1 276 63.8
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.1e-97 360.1 403 48.1
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 6.1e-97 358.6 389 45.0
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 1.8e-93 347.1 379 49.6
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 2.5e-90 336.7 267 63.3
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.8e-85 320.5 233 65.7
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 7.8e-84 315.1 251 62.2
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 2.5e-82 310.1 397 42.6
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.7e-78 297.4 364 42.0
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 1.7e-75 287.3 192 71.9
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 2.5e-66 256.9 193 62.7
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.3e-64 250.4 162 72.2
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.6e-60 236.1 248 49.6
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.8e-56 224.2 199 58.8
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 2.9e-54 216.9 185 61.1
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 8.4e-54 215.3 237 47.3
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 8.7e-51 205.3 160 62.5
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 2.1e-49 200.7 199 54.3
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 2.0e-47 194.1 141 66.7
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 1.4e-45 188.0 426 31.7
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 6.0e-44 182.6 367 31.3
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 5.6e-42 176.0 110 75.5
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 9.6e-42 175.3 134 59.7
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 2.8e-41 173.7 143 59.4
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 3.4e-39 166.8 239 40.2
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 4.2e-37 159.8 169 47.3
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 1.6e-36 157.9 141 58.9
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.8e-35 154.5 145 52.4
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 1.1e-34 151.8 93 78.5
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 2.8e-33 147.1 368 31.0
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.9e-30 137.1 100 66.0
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 3.2e-29 133.7 93 72.0
MCO12G177 Micromonas commoda HOM05D005798 ORTHO05D007269 1.2e-28 131.7 476 27.5
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 1.4e-24 118.2 100 57.0
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.2e-20 105.1 214 34.6
HPP92_011700 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.3e-18 97.1 57 75.4
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.3e-11 74.3 72 55.6
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 6.7e-11 72.8 82 45.1
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 6.7e-11 72.8 54 66.7
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 6.9e-08 62.8 86 45.3


User provided reference genes

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