Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 2.7e-146 521.9 260 100.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.4e-89 333.6 261 64.8
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.0e-89 332.0 259 64.5
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 9.9e-88 327.4 259 65.3
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.2e-82 307.8 261 59.4
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.2e-82 307.8 261 59.4
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.1e-81 305.8 264 59.5
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.1e-81 305.8 264 59.5
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.0e-81 304.3 264 59.1
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-80 303.9 262 58.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 4.5e-80 302.0 263 58.9
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 7.6e-80 301.2 262 58.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.0e-79 300.8 264 58.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.7e-79 300.1 262 58.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 7.1e-78 294.7 265 56.2
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 7.1e-78 294.7 265 57.4
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 9.3e-78 294.3 269 58.4
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.6e-77 293.5 269 58.7
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 3.5e-77 292.4 264 58.0
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 4.6e-77 292.0 263 56.3
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 7.9e-77 291.2 263 56.7
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.0e-76 290.8 266 55.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 1.8e-76 290.0 267 54.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.8e-76 290.0 279 55.2
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 2.3e-76 289.7 263 57.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.9e-76 288.9 267 55.8
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 5.1e-76 288.5 267 56.2
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 6.7e-76 288.1 271 55.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-75 287.3 262 56.1
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 1.5e-75 287.0 271 53.5
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 1.5e-75 287.0 263 56.7
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 5.7e-75 285.0 264 56.1
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.3e-74 283.9 264 54.5
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.3e-74 283.9 262 54.6
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.6e-74 283.5 263 54.8
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.1e-74 283.1 262 54.6
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 3.7e-74 282.3 269 57.6
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 6.3e-74 281.6 271 55.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.1e-73 280.8 263 56.7
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.1e-73 280.8 265 54.3
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.1e-73 280.8 267 54.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.8e-73 280.0 259 56.8
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.4e-73 279.6 265 54.0
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.1e-73 279.3 262 53.8
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 3.1e-73 279.3 263 53.6
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 4.1e-73 278.9 265 52.8
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.9e-73 278.1 268 56.0
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 6.9e-73 278.1 267 55.8
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 9.0e-73 277.7 267 52.1
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.2e-72 277.3 268 52.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.2e-72 277.3 268 52.2
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.0e-72 276.6 264 54.2
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.6e-72 276.2 268 52.2
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 4.5e-72 275.4 264 53.0
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 7.6e-72 274.6 273 50.5
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.0e-71 274.2 265 54.3
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.0e-71 274.2 265 52.5
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.0e-71 274.2 263 54.4
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.3e-71 273.9 267 55.8
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.3e-71 273.9 263 52.5
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 2.2e-71 273.1 268 54.5
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 2.9e-71 272.7 259 54.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 6.5e-71 271.6 268 54.9
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 8.5e-71 271.2 267 53.6
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.5e-71 271.2 256 54.3
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 8.5e-71 271.2 268 51.9
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 3.2e-70 269.2 265 53.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.2e-70 269.2 266 53.8
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 3.2e-70 269.2 263 52.1
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 3.2e-70 269.2 259 52.9
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 4.2e-70 268.9 267 52.1
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 4.2e-70 268.9 268 51.5
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 9.3e-70 267.7 267 51.7
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 1.6e-69 266.9 267 50.6
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.6e-69 265.4 267 50.2
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.3e-68 263.1 265 51.3
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 3.0e-68 262.7 239 57.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 5.1e-68 261.9 260 50.4
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 5.1e-68 261.9 262 49.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 8.7e-68 261.2 263 52.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.5e-67 260.4 260 49.2
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 2.5e-67 259.6 234 56.4
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 7.4e-67 258.1 264 50.0
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 9.7e-67 257.7 263 50.2
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 9.7e-67 257.7 269 52.8
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.3e-66 257.3 262 50.4
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.3e-66 257.3 262 50.4
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.8e-66 255.4 268 50.7
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.8e-65 253.4 261 51.0
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.3e-63 247.3 243 54.7
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 6.5e-63 245.0 260 49.2
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 2.1e-61 240.0 320 43.4
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 5.3e-57 225.3 328 41.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 4.5e-56 222.2 247 49.0
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 3.2e-54 216.1 276 42.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.2e-53 214.2 264 43.2
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.4e-52 210.7 257 45.5
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 5.2e-52 208.8 269 46.8
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.8e-50 203.0 270 41.5
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 4.2e-46 189.1 322 35.7
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.0e-44 184.5 266 41.7
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 4.8e-42 175.6 321 34.6
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.4e-41 173.3 199 48.7
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.9e-39 166.4 144 60.4
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.6e-35 153.3 240 39.6
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.4e-33 146.7 151 53.6
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 5.9e-32 142.1 294 32.0
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.3e-31 141.0 116 58.6
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.1e-30 137.9 151 51.0
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 7.0e-25 118.6 70 78.6
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.2e-24 117.9 69 76.8
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 3.3e-22 109.8 122 50.8
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 2.8e-21 106.7 104 51.0
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 2.6e-19 100.1 76 59.2
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.6e-19 100.1 74 60.8
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.3e-15 87.8 115 45.2
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.3e-15 87.8 259 27.4
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 5.0e-15 85.9 70 52.9
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.2e-13 79.0 124 39.5
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.4e-09 67.8 92 44.6
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.1e-08 63.9 49 55.1
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.9e-07 59.7 35 80.0


User provided reference genes

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