Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 5.9e-112 407.5 203 100.0
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 7.1e-41 171.4 149 57.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 2.1e-40 169.9 149 54.4
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.7e-40 169.5 149 57.0
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.0e-39 167.5 153 58.2
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 5.1e-39 165.2 159 52.2
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 8.7e-39 164.5 149 53.7
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 8.7e-39 164.5 155 52.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-38 163.3 158 53.2
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 2.1e-37 159.8 148 54.1
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 4.8e-37 158.7 149 53.7
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 4.8e-37 158.7 150 54.7
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 6.2e-37 158.3 156 50.0
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 8.1e-37 157.9 155 54.8
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 8.1e-37 157.9 149 54.4
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.8e-36 156.8 153 50.3
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 4.0e-36 155.6 149 53.0
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 9.0e-36 154.5 150 48.7
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 1.5e-35 153.7 151 51.0
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 2.0e-35 153.3 149 50.3
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.0e-35 153.3 149 49.7
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 2.6e-35 152.9 150 48.0
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 5.8e-35 151.8 149 51.7
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 5.8e-35 151.8 149 50.3
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 7.6e-35 151.4 150 47.3
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 7.6e-35 151.4 150 49.3
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 1.0e-34 151.0 149 52.3
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 1.3e-34 150.6 149 52.3
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 1.3e-34 150.6 149 51.7
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 1.7e-34 150.2 137 54.7
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 2.2e-34 149.8 152 50.0
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 2.2e-34 149.8 150 46.7
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 2.9e-34 149.4 150 46.7
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.9e-34 149.4 141 52.5
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 3.8e-34 149.1 135 54.8
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 3.8e-34 149.1 160 48.8
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 4.9e-34 148.7 141 53.9
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 4.9e-34 148.7 141 49.6
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 4.9e-34 148.7 149 49.7
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 1.1e-33 147.5 142 50.7
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 1.4e-33 147.1 134 54.5
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.9e-33 146.7 147 51.7
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 1.9e-33 146.7 137 52.6
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 2.5e-33 146.4 151 46.4
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.2e-33 146.0 142 50.0
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 4.2e-33 145.6 155 47.7
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 4.2e-33 145.6 143 52.4
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 5.5e-33 145.2 152 50.0
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 5.5e-33 145.2 140 51.4
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 7.1e-33 144.8 150 45.3
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 7.1e-33 144.8 142 50.0
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 9.3e-33 144.4 156 46.8
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 1.6e-32 143.7 151 46.4
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 2.1e-32 143.3 140 50.7
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 2.7e-32 142.9 151 48.3
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.7e-32 142.9 148 51.4
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 1.0e-31 141.0 150 48.7
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.3e-31 140.6 163 44.8
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.3e-31 140.6 142 47.9
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.3e-31 140.6 133 54.1
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.0e-31 139.4 162 44.4
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.0e-31 139.4 162 44.4
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 3.9e-31 139.0 163 43.6
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 3.9e-31 139.0 154 44.8
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 5.1e-31 138.7 169 46.2
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 8.7e-31 137.9 146 47.9
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 8.7e-31 137.9 123 56.1
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.1e-30 137.5 150 46.0
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 1.1e-30 137.5 152 46.1
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 9.6e-30 134.4 153 45.8
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 9.6e-30 134.4 148 50.7
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 9.6e-30 134.4 173 44.5
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.3e-29 134.0 153 47.1
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.4e-28 129.8 117 56.4
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 5.3e-28 128.6 157 40.8
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 6.9e-28 128.3 131 51.1
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 6.9e-28 128.3 154 46.8
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 6.9e-28 128.3 134 49.3
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 9.0e-28 127.9 154 46.8
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 1.2e-27 127.5 152 42.1
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.5e-27 127.1 119 53.8
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 4.5e-27 125.6 143 46.2
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 5.9e-27 125.2 145 47.6
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 1.7e-26 123.6 143 45.5
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 8.4e-26 121.3 154 43.5
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.1e-25 120.9 105 60.0
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 1.9e-25 120.2 120 47.5
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 9.3e-25 117.9 152 40.1
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 9.3e-25 117.9 152 40.1
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.2e-24 117.5 115 54.8
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 1.2e-24 117.5 156 43.6
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.8e-23 113.6 151 43.7
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 1.8e-23 113.6 124 48.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 6.7e-23 111.7 148 39.2
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 1.9e-22 110.2 147 43.5
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 9.7e-22 107.8 100 55.0
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 8.2e-21 104.8 147 39.5
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 6.9e-20 101.7 110 44.5
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 5.9e-19 98.6 136 41.2
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 1.0e-18 97.8 140 43.6
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 1.1e-17 94.4 155 38.7
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 9.4e-17 91.3 95 49.5
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 3.6e-16 89.4 83 56.6
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 1.4e-15 87.4 151 36.4
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.5e-14 84.0 140 34.3
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 3.3e-14 82.8 94 48.9
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 3.3e-14 82.8 164 34.1
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 4.3e-14 82.4 91 47.3
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 7.4e-14 81.6 87 49.4
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 1.3e-13 80.9 87 52.9
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 2.2e-13 80.1 70 52.9
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 2.8e-13 79.7 154 31.2
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 4.1e-12 75.9 129 37.2
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 7.7e-11 71.6 149 36.2
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 7.7e-11 71.6 121 33.1
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 2.2e-10 70.1 69 56.5
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 2.2e-10 70.1 83 45.8
Os04g0601400 Oryza sativa ssp. japonica HOM05D005192 ORTHO05D006023 4.2e-09 65.9 148 31.1
Eucgr.E01765 Eucalyptus grandis HOM05D005192 ORTHO05D006023 2.1e-08 63.5 150 29.3
TPR.G17364 Trifolium pratense HOM05D005192 ORTHO05D006023 2.1e-08 63.5 141 31.2
A03p65120 Brassica napus HOM05D002637 ORTHO05D009046 2.7e-08 63.2 111 39.6
PGSC0003DMG400001805 Solanum tuberosum HOM05D005192 ORTHO05D006023 6.1e-08 62.0 146 29.5
Phvul.010G038600 Phaseolus vulgaris HOM05D005192 ORTHO05D006023 1.0e-07 61.2 144 31.2
Ah.05g177160 Amaranthus hybridus HOM05D005192 ORTHO05D006023 1.4e-07 60.8 140 30.0
BraA03t15571Z Brassica rapa HOM05D002637 ORTHO05D009046 1.4e-07 60.8 106 40.6
Hma1.2p1_0353F.1_g133370 Hydrangea macrophylla HOM05D005192 ORTHO05D006023 1.4e-07 60.8 149 30.9
Psat4g215840 Pisum sativum HOM05D005192 ORTHO05D006023 1.4e-07 60.8 153 28.8
VMungo0331G1938 Vigna mungo HOM05D005192 ORTHO05D006023 1.4e-07 60.8 144 31.2
Haze_15802 Corylus avellana HOM05D005192 ORTHO05D006023 1.8e-07 60.5 141 29.8
Medtr8g009870 Medicago truncatula HOM05D005192 ORTHO05D006023 1.8e-07 60.5 153 29.4
Sc26g0002010 Simmondsia chinensis HOM05D005192 ORTHO05D006023 1.8e-07 60.5 149 29.5
CANSAT01G0826 Cannabis sativa HOM05D005192 ORTHO05D006023 2.3e-07 60.1 143 28.7
Hund26918 Selenicereus undatus HOM05D005192 ORTHO05D006023 2.3e-07 60.1 143 30.1
Peaxi162Scf00245g00322 Petunia axillaris HOM05D005192 ORTHO05D006023 3.9e-07 59.3 140 27.9
PGR042G1459 Punica granatum HOM05D005192 ORTHO05D006023 3.9e-07 59.3 150 28.7
AUR62014514 Chenopodium quinoa HOM05D000462 ORTHO05D006023 5.1e-07 58.9 143 29.4
Ciclev10032932m.g Citrus clementina HOM05D005192 ORTHO05D006023 5.1e-07 58.9 113 34.5
Thecc.05G232400 Theobroma cacao HOM05D005192 ORTHO05D006023 5.1e-07 58.9 138 28.3
HanXRQChr11g0330951 Helianthus annuus HOM05D005192 ORTHO05D006023 6.7e-07 58.5 128 32.0
Lj9C612T3 Lonicera japonica HOM05D005192 ORTHO05D006023 6.7e-07 58.5 140 28.6
Actinidia05822 Actinidia chinensis HOM05D005192 ORTHO05D006023 8.8e-07 58.2 140 27.9
Solyc01g081190.4 Solanum lycopersicum HOM05D005192 ORTHO05D006023 8.8e-07 58.2 147 29.9
Sopen01g032770 Solanum pennellii HOM05D005192 ORTHO05D006023 8.8e-07 58.2 147 29.9
Cpa.g.sc73.77 Carica papaya HOM05D005192 ORTHO05D006023 1.1e-06 57.8 139 30.2
Ca_25887_v3 Cicer arietinum L. HOM05D000403 ORTHO05D000350 1.1e-06 57.8 150 29.3
Cc02_g26360 Coffea canephora HOM05D005192 ORTHO05D006023 1.1e-06 57.8 147 28.6
Duzib177G0632 Durio zibethinus HOM05D005192 ORTHO05D006023 1.1e-06 57.8 142 28.2
Glyma.07G123500 Glycine max HOM05D005192 ORTHO05D006023 1.1e-06 57.8 118 32.2
Gohir.D13G100100 Gossypium hirsutum HOM05D005192 ORTHO05D006023 1.1e-06 57.8 138 27.5
Gorai.013G112500 Gossypium raimondii HOM05D005192 ORTHO05D006023 1.1e-06 57.8 138 27.5
Potri.013G072600 Populus trichocarpa HOM05D005192 ORTHO05D006023 1.1e-06 57.8 115 32.2
THA.LOC104805728 Tarenaya hassleriana HOM05D005192 ORTHO05D006023 1.1e-06 57.8 139 28.8
CiPaw.01G068900 Carya illinoinensis HOM05D005192 ORTHO05D006023 1.5e-06 57.4 155 27.1
Dinv43977 Davidia involucrata HOM05D005192 ORTHO05D006023 1.5e-06 57.4 150 30.0
Glyma.03G098300 Glycine max HOM05D005192 ORTHO05D006023 2.0e-06 57.0 139 28.1
Gohir.A13G082000 Gossypium hirsutum HOM05D005192 ORTHO05D006023 2.0e-06 57.0 138 27.5
Oeu041522.2 Olea europaea HOM05D005192 ORTHO05D006023 2.0e-06 57.0 126 28.6
Oeu060687.1 Olea europaea HOM05D005192 ORTHO05D006023 2.0e-06 57.0 143 28.7
Rhsim07G0045800 Rhododendron simsii HOM05D005192 ORTHO05D006023 2.0e-06 57.0 147 28.6
vmacro13584 Vaccinium macrocarpon HOM05D005192 ORTHO05D006023 2.0e-06 57.0 125 29.6
TWI32G1299 Tripterygium wilfordii HOM05D005192 ORTHO05D006023 2.6e-06 56.6 115 32.2
CiPaw.02G036100 Carya illinoinensis HOM05D005192 ORTHO05D006023 3.3e-06 56.2 141 27.0
Duzib128G1721 Durio zibethinus HOM05D005192 ORTHO05D006023 3.3e-06 56.2 138 29.7
Lalb_Chr12g0210171 Lupinus albus HOM05D005192 ORTHO05D006023 4.4e-06 55.8 146 27.4
Nn3g21165 Nelumbo nucifera HOM05D005192 ORTHO05D006023 4.4e-06 55.8 152 30.9
Gorai.007G248800 Gossypium raimondii HOM05D005192 ORTHO05D006023 5.7e-06 55.5 123 30.1
Nitab4.5_0004594g0120 Nicotiana tabacum HOM05D005192 ORTHO05D006023 5.7e-06 55.5 146 28.1
Nitab4.5_0004800g0050 Nicotiana tabacum HOM05D005192 ORTHO05D006023 5.7e-06 55.5 146 28.1
Peaxi162Scf00592g00452 Petunia axillaris HOM05D005192 ORTHO05D006023 5.7e-06 55.5 119 29.4
Gohir.A11G222400 Gossypium hirsutum HOM05D005192 ORTHO05D006023 7.4e-06 55.1 171 26.3


User provided reference genes

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