Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 8.4e-51 203.4 101 100.0
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 1.5e-28 129.4 109 62.4
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 1.0e-27 126.7 97 63.9
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 3.8e-27 124.8 97 62.9
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 3.8e-27 124.8 97 61.9
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 9.4e-26 120.2 98 61.2
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 9.4e-26 120.2 97 59.8
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 1.2e-25 119.8 78 74.4
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 1.6e-25 119.4 100 63.0
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 4.6e-25 117.9 97 58.8
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 6.1e-25 117.5 79 65.8
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 7.9e-25 117.1 96 61.5
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 1.0e-24 116.7 97 61.9
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.3e-24 115.5 103 60.2
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 3.9e-24 114.8 79 70.9
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 6.7e-24 114.0 84 63.1
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 8.8e-24 113.6 84 65.5
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 1.1e-23 113.2 94 59.6
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 2.0e-23 112.5 79 68.4
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 2.5e-23 112.1 80 61.2
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 2.5e-23 112.1 80 61.2
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 3.3e-23 111.7 94 60.6
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 4.3e-23 111.3 76 72.4
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 4.3e-23 111.3 76 67.1
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 4.3e-23 111.3 76 67.1
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 7.4e-23 110.5 83 66.3
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 1.7e-22 109.4 95 56.8
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 2.2e-22 109.0 79 67.1
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 2.8e-22 108.6 97 55.7
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 8.2e-22 107.1 97 59.8
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 1.1e-21 106.7 79 68.4
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 1.4e-21 106.3 106 54.7
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 1.4e-21 106.3 96 58.3
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 1.8e-21 105.9 93 62.4
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 1.8e-21 105.9 97 56.7
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 2.4e-21 105.5 80 61.2
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 3.1e-21 105.1 74 70.3
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 3.1e-21 105.1 102 52.0
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 5.3e-21 104.4 89 55.1
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 5.3e-21 104.4 96 58.3
Migut.O00539 Erythranthe guttata HOM05D006948 ORTHO05D008703 1.2e-20 103.2 96 55.2
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 1.5e-20 102.8 75 68.0
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 2.0e-20 102.4 102 51.0
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 2.0e-20 102.4 100 53.0
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 2.6e-20 102.1 97 53.6
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 3.4e-20 101.7 73 65.8
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 4.5e-20 101.3 99 54.5
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 5.9e-20 100.9 99 49.5
Migut.N01755 Erythranthe guttata HOM05D006948 ORTHO05D008703 7.7e-20 100.5 96 53.1
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 1.0e-19 100.1 76 69.7
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 1.7e-19 99.4 81 56.8
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 2.2e-19 99.0 83 54.2
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 2.2e-19 99.0 105 50.5
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 2.9e-19 98.6 77 63.6
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 2.9e-19 98.6 98 54.1
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 3.8e-19 98.2 74 64.9
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 5.0e-19 97.8 81 58.0
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 5.0e-19 97.8 81 58.0
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 5.0e-19 97.8 80 56.2
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 5.0e-19 97.8 74 64.9
Oeu035671.1 Olea europaea HOM05D006948 ORTHO05D008703 5.0e-19 97.8 86 60.5
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 5.0e-19 97.8 97 50.5
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 6.5e-19 97.4 97 51.5
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 8.5e-19 97.1 102 50.0
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 1.1e-18 96.7 74 66.2
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 1.4e-18 96.3 71 69.0
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 1.9e-18 95.9 99 54.5
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 1.9e-18 95.9 101 52.5
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 9.4e-18 93.6 72 68.1
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 2.1e-17 92.4 100 52.0
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 2.1e-17 92.4 78 59.0
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 6.1e-17 90.9 75 58.7
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 6.1e-17 90.9 78 61.5
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 7.9e-17 90.5 77 63.6
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.0e-16 90.1 79 57.0
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.0e-16 90.1 79 57.0
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 1.4e-16 89.7 78 61.5
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 1.8e-16 89.4 80 58.8
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 1.8e-16 89.4 75 61.3
ClCG05G000390 Citrullus lanatus HOM05D006948 ORTHO05D008703 2.3e-16 89.0 60 66.7
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 2.3e-16 89.0 79 57.0
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 2.3e-16 89.0 79 57.0
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 5.1e-16 87.8 128 41.4
FvH4_7g09680 Fragaria vesca HOM05D006948 ORTHO05D008703 5.1e-16 87.8 79 55.7
FAN06G1163 Fragaria x ananassa HOM05D006948 ORTHO05D008703 5.1e-16 87.8 79 55.7
FAN06G4415 Fragaria x ananassa HOM05D006948 ORTHO05D008703 5.1e-16 87.8 79 55.7
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 2.0e-15 85.9 58 72.4
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 2.0e-15 85.9 58 70.7
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 4.4e-15 84.7 60 66.7
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 5.7e-15 84.3 58 69.0
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 5.7e-15 84.3 58 69.0
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 5.7e-15 84.3 92 51.1
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 9.7e-15 83.6 58 69.0
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 2.2e-14 82.4 78 59.0
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 2.8e-14 82.0 78 59.0
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 3.7e-14 81.6 83 50.6
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 1.8e-13 79.3 82 50.0
Psat3g154680 Pisum sativum HOM05D006948 ORTHO05D008703 3.1e-13 78.6 61 57.4
Sc23g0003950 Simmondsia chinensis HOM05D006948 ORTHO05D008703 3.1e-13 78.6 54 74.1
TAR629G0288 Trochodendron aralioides HOM05D006948 ORTHO05D000005 4.1e-13 78.2 56 71.4
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 1.2e-12 76.6 77 49.4
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 4.5e-12 74.7 71 53.5
HPP92_014505 Vanilla planifolia HOM05D006948 ORTHO05D008703 7.7e-12 73.9 82 48.8
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 1.7e-11 72.8 78 55.1
SalBow5G2465 Salvia bowleyana HOM05D006948 ORTHO05D008703 1.7e-11 72.8 79 48.1
SalBow5G5528 Salvia bowleyana HOM05D006948 ORTHO05D008703 1.7e-11 72.8 79 48.1
SHI13603 Sapria himalayana HOM05D006948 ORTHO05D008703 8.5e-11 70.5 58 55.2
SEGI_25204 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 9.4e-10 67.0 72 55.6
SEGI_39218 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 9.4e-10 67.0 72 55.6
DCAR_025075 Daucus carota HOM05D006948 ORTHO05D008703 1.6e-09 66.2 76 47.4
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 2.7e-09 65.5 50 66.0
Medtr7g446470 Medicago truncatula HOM05D006948 ORTHO05D008703 3.3e-07 58.5 48 60.4
Pp3c5_22300 Physcomitrium patens HOM05D006948 ORTHO05D008703 2.2e-06 55.8 98 37.8
ATR0767G212 Amborella trichopoda HOM05D006948 ORTHO05D008703 4.8e-06 54.7 60 53.3


User provided reference genes

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