Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 5.5e-96 354.4 190 100.0
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 1.9e-67 259.6 193 76.7
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 5.1e-65 251.5 185 74.1
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.2e-63 246.9 196 75.0
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 8.4e-60 234.2 201 69.7
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 2.1e-58 229.6 183 72.1
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 1.7e-57 226.5 182 68.7
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 2.3e-57 226.1 200 66.0
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 3.9e-57 225.3 181 70.2
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 5.1e-57 224.9 181 70.7
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 1.9e-56 223.0 185 67.0
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 2.5e-56 222.6 178 70.8
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 9.6e-56 220.7 193 65.8
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 1.3e-55 220.3 182 68.1
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.1e-55 219.5 193 65.8
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 2.8e-55 219.2 185 65.9
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 6.2e-55 218.0 173 71.1
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 6.2e-55 218.0 201 67.2
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 2.4e-54 216.1 200 64.0
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 9.0e-54 214.2 182 68.7
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 2.0e-53 213.0 185 63.8
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 2.0e-53 213.0 170 69.4
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 2.0e-53 213.0 169 68.6
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 3.4e-53 212.2 184 65.8
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 4.4e-53 211.8 179 66.5
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 5.8e-53 211.5 191 64.9
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 7.6e-53 211.1 189 66.7
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 9.9e-53 210.7 200 61.5
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 9.9e-53 210.7 196 64.8
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 1.3e-52 210.3 168 69.6
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 1.7e-52 209.9 182 66.5
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 2.2e-52 209.5 189 66.1
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 2.2e-52 209.5 177 68.4
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 2.9e-52 209.1 178 68.0
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 2.9e-52 209.1 178 68.0
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 4.9e-52 208.4 187 63.6
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 1.1e-51 207.2 194 62.9
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 1.4e-51 206.8 189 64.6
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.4e-51 206.8 188 63.3
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 1.9e-51 206.5 188 67.6
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 1.9e-51 206.5 200 62.0
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 1.9e-51 206.5 159 71.7
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 4.2e-51 205.3 196 61.7
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 9.3e-51 204.1 179 64.2
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 9.3e-51 204.1 198 62.1
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 1.2e-50 203.8 194 61.9
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 2.1e-50 203.0 191 64.4
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 3.5e-50 202.2 184 63.0
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 3.5e-50 202.2 179 64.2
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 3.5e-50 202.2 175 65.1
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 4.6e-50 201.8 183 63.4
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 4.6e-50 201.8 184 65.2
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 6.0e-50 201.4 186 62.9
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 6.0e-50 201.4 183 63.4
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 6.0e-50 201.4 186 61.3
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 6.0e-50 201.4 180 65.0
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 7.9e-50 201.1 182 63.7
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 1.3e-49 200.3 189 61.9
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.3e-49 200.3 168 69.0
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 2.3e-49 199.5 184 62.0
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 2.3e-49 199.5 202 59.9
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 5.1e-49 198.4 183 63.4
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 6.6e-49 198.0 196 61.2
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 6.6e-49 198.0 188 64.4
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 8.7e-49 197.6 173 63.6
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 8.7e-49 197.6 197 59.9
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 4.3e-48 195.3 181 62.4
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 4.3e-48 195.3 175 65.1
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 2.1e-47 193.0 169 63.9
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.1e-47 193.0 189 60.8
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.8e-47 192.6 219 55.7
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 3.6e-47 192.2 197 60.4
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 3.6e-47 192.2 173 63.6
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 8.1e-47 191.0 181 61.3
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 1.4e-46 190.3 185 63.2
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.8e-46 189.9 174 62.1
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 1.8e-46 189.9 171 62.6
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 4.0e-46 188.7 113 87.6
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 1.2e-45 187.2 183 60.7
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 1.2e-45 187.2 113 85.8
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-45 187.2 185 58.4
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 2.0e-45 186.4 187 58.8
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 2.0e-45 186.4 190 58.4
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.6e-45 186.0 125 76.8
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 2.6e-45 186.0 186 59.1
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 5.8e-45 184.9 185 57.8
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 5.8e-45 184.9 189 60.3
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 9.9e-45 184.1 205 55.6
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 9.9e-45 184.1 237 48.1
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 1.3e-44 183.7 173 63.6
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 6.4e-44 181.4 205 56.6
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 6.4e-44 181.4 118 76.3
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.4e-43 180.3 203 56.2
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 3.2e-43 179.1 205 56.6
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 3.2e-43 179.1 112 81.2
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 9.3e-43 177.6 113 80.5
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 1.6e-42 176.8 155 67.7
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.7e-42 176.0 157 64.3
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 1.3e-41 173.7 112 76.8
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 3.0e-41 172.6 200 54.0
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 3.9e-41 172.2 163 60.1
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 6.7e-41 171.4 200 53.0
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 8.7e-41 171.0 118 74.6
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 7.4e-40 167.9 113 75.2
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 9.6e-40 167.5 157 61.1
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 3.5e-34 149.1 148 62.2
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 4.6e-34 148.7 148 62.2
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.0e-33 147.5 194 50.5
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 4.1e-30 135.6 92 75.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 4.1e-30 135.6 88 77.3
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 2.0e-29 133.3 92 69.6
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.6e-29 132.9 98 74.5
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 1.3e-28 130.6 72 86.1
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 1.3e-28 130.6 110 59.1
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.7e-28 130.2 92 68.5
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 7.2e-27 124.8 71 84.5
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 1.3e-25 120.6 175 43.4
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 6.7e-25 118.2 100 57.0
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 2.8e-23 112.8 119 48.7
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.1e-22 110.9 143 56.6
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.8e-22 110.2 101 53.5
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 4.1e-22 109.0 90 61.1
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 1.2e-21 107.5 94 55.3
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.5e-21 107.1 97 53.6
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.6e-18 97.1 146 49.3
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 3.9e-17 92.4 149 41.6
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 3.1e-14 82.8 92 47.8


User provided reference genes

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