Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 2.9e-99 365.2 173 100.0
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.1e-74 283.5 180 76.1
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.4e-74 282.3 176 77.8
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 1.6e-73 279.6 176 75.0
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 6.0e-73 277.7 169 78.7
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 7.8e-73 277.3 176 75.6
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 7.8e-73 277.3 176 75.6
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.0e-72 276.9 171 77.2
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.0e-72 276.9 169 78.1
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 1.3e-72 276.6 170 77.6
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.7e-72 276.2 177 75.1
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.7e-72 276.2 177 75.1
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.9e-72 275.0 176 75.0
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 5.1e-72 274.6 175 74.9
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 6.6e-72 274.2 177 74.0
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 2.5e-71 272.3 175 76.0
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 3.3e-71 271.9 175 76.0
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 4.3e-71 271.6 174 73.0
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 4.3e-71 271.6 177 74.0
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 9.6e-71 270.4 159 79.9
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 9.6e-71 270.4 177 72.9
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.3e-70 270.0 174 74.1
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 1.3e-70 270.0 160 80.0
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.3e-70 270.0 160 80.0
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 1.3e-70 270.0 168 78.0
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 1.6e-70 269.6 168 76.2
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.6e-70 269.6 169 77.5
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 2.1e-70 269.2 170 75.9
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 4.8e-70 268.1 170 75.3
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 8.1e-70 267.3 176 72.7
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.4e-69 266.5 170 74.1
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.8e-69 266.2 176 72.2
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 1.8e-69 266.2 176 72.2
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 3.1e-69 265.4 154 79.9
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.0e-69 265.0 175 72.0
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 6.9e-69 264.2 176 72.7
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 9.0e-69 263.8 161 77.0
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 9.0e-69 263.8 161 77.0
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 9.0e-69 263.8 158 78.5
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.2e-68 263.5 159 79.2
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.2e-68 263.5 169 75.1
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.5e-68 263.1 154 79.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.5e-68 263.1 154 79.9
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.5e-68 263.1 170 73.5
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 2.0e-68 262.7 169 74.6
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 2.0e-68 262.7 169 75.1
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 2.6e-68 262.3 160 76.9
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 3.4e-68 261.9 154 79.9
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 3.4e-68 261.9 176 71.6
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 3.4e-68 261.9 165 74.5
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 4.5e-68 261.5 168 73.8
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 1.7e-67 259.6 167 73.1
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 1.7e-67 259.6 169 74.6
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.7e-67 259.6 160 76.2
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.7e-67 259.6 160 75.6
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 2.2e-67 259.2 169 73.4
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 2.9e-67 258.8 170 73.5
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 3.8e-67 258.5 155 76.8
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 3.8e-67 258.5 160 76.9
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 8.4e-67 257.3 167 73.7
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 8.4e-67 257.3 169 74.0
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.1e-66 256.9 161 73.3
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 1.1e-66 256.9 174 71.8
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.4e-66 256.5 161 74.5
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.9e-66 256.1 169 72.2
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 2.4e-66 255.8 154 77.9
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 3.2e-66 255.4 154 76.6
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 5.4e-66 254.6 154 77.3
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 5.4e-66 254.6 160 73.8
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 9.3e-66 253.8 155 76.8
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 9.3e-66 253.8 168 71.4
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.6e-65 253.1 160 71.9
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 2.1e-65 252.7 169 72.2
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 6.0e-65 251.1 161 74.5
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 7.9e-65 250.8 169 72.2
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 3.0e-64 248.8 165 72.7
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.9e-64 248.4 174 69.5
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.9e-64 248.4 174 69.5
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.9e-64 248.4 174 69.5
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 3.9e-64 248.4 174 69.5
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 5.1e-64 248.1 172 69.8
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 5.1e-64 248.1 174 69.0
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 8.7e-64 247.3 172 69.8
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 8.7e-64 247.3 172 69.8
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 8.7e-64 247.3 173 69.4
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.1e-63 246.9 154 77.3
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.5e-63 245.7 183 66.1
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 8.1e-62 240.7 157 74.5
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.4e-61 240.0 146 78.8
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 4.0e-61 238.4 147 76.9
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.6e-60 235.7 155 72.3
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 7.1e-58 227.6 139 77.7
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 1.8e-56 223.0 164 66.5
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 4.8e-54 214.9 143 72.7
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 6.2e-54 214.5 160 63.8
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 9.0e-53 210.7 122 77.0
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 2.6e-52 209.1 178 59.0
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 8.4e-51 204.1 171 59.6
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 8.2e-46 187.6 155 58.1
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.4e-44 182.2 120 71.7
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 4.5e-44 181.8 168 56.5
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.3e-43 180.3 112 74.1
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 2.0e-39 166.4 107 74.8
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.2e-34 149.1 112 61.6
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 3.7e-30 135.6 130 53.1
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 4.1e-29 132.1 154 43.5
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 1.0e-27 127.5 86 67.4
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 3.2e-18 95.9 187 36.4
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 4.5e-12 75.5 42 78.6
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.8e-08 63.5 34 82.4


User provided reference genes

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