Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.2e-247 859.4 423 100.0
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 2.2e-129 466.5 423 58.4
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.5e-125 453.8 419 57.3
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 7.4e-125 451.4 432 57.9
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.1e-123 447.6 430 55.8
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 2.5e-120 436.4 418 57.9
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 4.2e-120 435.6 418 55.7
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 4.7e-119 432.2 438 55.9
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 6.7e-118 428.3 428 54.2
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.1e-117 427.6 424 54.2
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 2.6e-117 426.4 436 51.6
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.8e-115 420.2 411 56.4
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 9.1e-115 417.9 372 58.3
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 4.5e-114 415.6 423 53.9
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.3e-113 414.1 424 53.5
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 1.5e-112 410.6 431 53.6
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 3.2e-112 409.5 421 52.5
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 3.2e-112 409.5 432 51.9
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 4.2e-112 409.1 361 58.2
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 9.4e-112 407.9 422 51.7
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 6.1e-111 405.2 426 51.4
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 6.1e-111 405.2 424 50.7
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.8e-110 403.7 368 57.1
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 4.0e-110 402.5 422 52.6
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 8.8e-110 401.4 433 50.3
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 8.8e-110 401.4 425 50.4
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 3.3e-109 399.4 427 51.1
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 7.5e-109 398.3 433 49.9
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 5.3e-107 392.1 463 49.0
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 2.0e-106 390.2 427 51.1
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 3.5e-106 389.4 426 49.8
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 3.5e-106 389.4 409 54.8
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 4.5e-106 389.0 422 50.2
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 5.9e-106 388.7 427 50.4
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.2e-105 386.7 420 47.9
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 2.9e-105 386.3 420 51.7
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 8.5e-105 384.8 424 49.3
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 2.5e-104 383.3 418 50.2
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.0e-102 377.9 419 48.2
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 4.0e-102 375.9 427 48.9
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 6.8e-102 375.2 429 48.5
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 8.8e-102 374.8 421 49.6
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.2e-101 374.4 424 48.3
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.5e-101 374.0 421 48.2
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 2.6e-101 373.2 423 48.7
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 4.4e-101 372.5 429 48.5
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.0e-99 365.2 426 47.7
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 7.7e-98 361.7 450 45.8
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 5.0e-97 359.0 389 51.9
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 8.0e-95 351.7 419 45.8
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.8e-94 350.5 422 45.5
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 7.0e-91 338.6 391 48.6
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.0e-91 338.6 511 41.5
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 1.6e-90 337.4 375 49.3
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.3e-89 333.6 389 48.6
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 4.3e-88 329.3 428 44.6
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 3.6e-87 326.2 392 46.7
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 6.1e-87 325.5 360 50.0
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 5.8e-85 318.9 416 46.4
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 8.0e-79 298.5 310 54.2
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.5e-74 283.1 414 42.8
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 6.6e-73 278.9 460 41.1
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.9e-72 277.3 341 45.7
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 2.5e-72 276.9 417 41.0
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 5.2e-70 269.2 442 38.5
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.7e-68 264.2 449 40.8
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 7.3e-64 248.8 270 47.8
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 2.1e-55 220.7 324 41.0
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 6.9e-54 215.7 260 45.8
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.0e-53 214.2 201 53.7
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 4.6e-50 203.0 212 53.3
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.8e-46 191.0 259 38.6
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.2e-42 178.3 207 48.8
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.8e-41 174.5 309 37.5
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.9e-40 171.0 163 54.0
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 6.5e-28 129.4 251 34.7
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 7.1e-27 125.9 86 68.6
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 5.9e-21 106.3 159 41.5
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 2.2e-20 104.4 71 66.2
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 6.5e-20 102.8 86 62.8
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.3e-15 88.6 131 42.7
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 5.3e-14 83.2 189 30.7
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 2.6e-08 64.3 127 27.6
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 7.4e-08 62.8 37 75.7
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.8e-07 60.1 72 44.4


User provided reference genes

Program Settings