Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 0.0e+00 1211.4 601 100.0
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.3e-207 726.9 607 65.7
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.6e-202 709.9 627 64.4
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 6.3e-202 708.0 627 61.9
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 1.4e-201 706.8 619 63.2
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.8e-201 706.4 550 69.3
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 2.0e-200 703.0 565 66.2
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 8.5e-199 697.6 613 63.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.9e-198 696.4 620 62.9
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 5.1e-196 688.3 618 62.1
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.1e-195 687.2 624 62.3
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 7.4e-195 684.5 605 63.5
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.6e-194 683.3 626 61.2
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.6e-194 683.3 618 62.9
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.2e-194 682.9 488 71.1
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 2.8e-194 682.6 582 62.5
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.8e-194 682.6 614 62.9
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.7e-194 682.2 503 71.0
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 6.3e-194 681.4 488 70.9
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 6.3e-194 681.4 589 64.2
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 8.2e-194 681.0 508 71.1
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.1e-193 680.6 622 61.9
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 4.1e-193 678.7 615 62.8
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 9.1e-193 677.6 539 66.8
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 5.9e-192 674.9 517 69.1
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.9e-190 669.8 615 59.8
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.2e-189 667.2 622 62.4
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.6e-189 666.8 540 65.2
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 2.7e-189 666.0 606 62.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 6.1e-189 664.8 606 62.5
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 7.9e-189 664.5 566 63.1
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.0e-188 664.1 619 59.9
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.3e-188 662.9 488 69.5
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.3e-188 662.9 513 67.8
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 3.9e-188 662.1 615 61.6
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 5.1e-188 661.8 507 67.7
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 6.7e-188 661.4 517 67.3
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 8.8e-188 661.0 630 59.5
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 8.8e-188 661.0 447 74.3
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 1.1e-187 660.6 549 65.2
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.5e-187 660.2 620 60.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.0e-187 659.8 431 76.1
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.6e-187 659.4 637 59.3
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.3e-187 659.1 413 79.2
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 5.7e-187 658.3 626 61.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 7.4e-187 657.9 619 60.4
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 9.7e-187 657.5 613 60.5
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 9.7e-187 657.5 528 65.9
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.3e-186 657.1 524 66.4
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.7e-186 656.8 554 63.7
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.7e-186 656.8 618 59.4
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 4.8e-186 655.2 546 65.4
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 8.2e-186 654.4 609 60.9
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 1.1e-185 654.1 612 60.6
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.1e-185 654.1 620 59.0
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.4e-185 652.9 589 62.8
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.4e-185 652.9 622 59.6
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.4e-185 652.9 622 59.6
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 2.4e-185 652.9 539 64.7
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 3.1e-185 652.5 612 60.1
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.5e-184 650.2 622 59.6
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 2.6e-184 649.4 519 66.7
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.6e-184 649.4 610 59.3
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 2.6e-184 649.4 607 59.5
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 2.6e-184 649.4 624 60.3
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.4e-184 649.0 619 59.8
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 4.5e-184 648.7 608 59.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 7.7e-184 647.9 525 65.0
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.3e-183 647.1 600 60.7
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 2.9e-183 646.0 428 75.7
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 5.0e-183 645.2 433 74.4
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.4e-182 643.7 407 77.9
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.9e-182 643.3 427 75.2
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 3.2e-182 642.5 412 76.9
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 4.2e-182 642.1 529 65.2
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 4.2e-182 642.1 611 59.4
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 5.5e-182 641.7 429 75.3
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 5.5e-182 641.7 604 61.6
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 1.2e-181 640.6 440 72.7
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.7e-181 639.4 617 58.2
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 6.1e-181 638.3 558 62.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 7.9e-181 637.9 603 60.5
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 3.9e-180 635.6 633 56.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 4.4e-179 632.1 620 57.9
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 4.4e-179 632.1 608 60.2
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 7.4e-179 631.3 485 67.4
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 9.7e-179 630.9 419 74.5
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.7e-178 630.2 608 60.2
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.2e-178 629.8 617 58.0
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.3e-178 628.2 502 67.3
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.1e-177 627.5 417 73.9
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.8e-177 626.7 478 68.4
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 2.4e-177 626.3 593 57.7
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 4.1e-177 625.5 411 75.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 4.1e-177 625.5 618 56.8
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 2.6e-176 622.9 499 65.7
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 4.5e-176 622.1 413 75.5
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 5.9e-176 621.7 450 71.1
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.2e-175 619.8 626 56.1
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 2.9e-175 619.4 608 58.2
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 2.9e-175 619.4 606 58.7
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-175 618.6 599 58.8
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.1e-174 617.5 410 75.4
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 7.2e-174 614.8 495 64.4
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 9.4e-174 614.4 403 74.9
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.1e-173 613.2 476 66.6
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.3e-172 609.8 468 66.2
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.0e-172 609.0 495 64.0
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.0e-172 609.0 561 59.5
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 5.2e-172 608.6 520 62.1
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 8.8e-172 607.8 510 62.2
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.2e-171 607.4 614 56.5
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 4.4e-171 605.5 542 60.3
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 1.3e-170 604.0 581 57.7
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.8e-170 602.8 581 57.5
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 2.8e-170 602.8 586 57.5
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 3.7e-170 602.4 507 63.1
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 8.2e-170 601.3 586 57.5
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 5.3e-169 598.6 447 68.0
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.7e-168 596.3 471 65.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.7e-168 596.3 471 65.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 3.5e-168 595.9 608 55.6
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 5.9e-168 595.1 502 62.2
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 5.9e-168 595.1 502 62.2
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 5.9e-168 595.1 502 62.2
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 7.7e-168 594.7 464 65.5
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 1.3e-167 594.0 580 58.8
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.3e-167 594.0 400 75.0
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 2.9e-167 592.8 592 57.3
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.2e-165 587.4 557 57.8
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 6.8e-164 581.6 347 83.3
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 3.4e-163 579.3 572 57.9
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.4e-161 573.9 467 66.6
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.8e-154 549.7 397 68.8
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.1e-153 546.2 363 73.6
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.5e-150 536.6 594 55.1
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.7e-138 496.1 425 60.2
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 4.9e-138 495.7 499 54.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 6.4e-138 495.4 462 57.1
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.9e-137 493.8 347 68.9
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 7.8e-128 461.8 374 61.8
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 5.1e-127 459.1 378 64.0
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 8.1e-125 451.8 303 70.6
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 3.8e-98 363.2 417 49.9
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.8e-91 339.3 404 54.0
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 7.6e-91 339.0 209 75.6
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 2.2e-85 320.9 196 76.0
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 2.0e-75 287.7 179 74.3
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 2.7e-72 277.3 259 59.1
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 6.3e-69 266.2 158 78.5
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 4.1e-68 263.5 155 79.4
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 4.1e-68 263.5 155 79.4
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 3.3e-62 243.8 358 38.8
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.6e-59 235.0 434 37.8
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 4.4e-54 216.9 302 39.4
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.7e-50 204.9 206 58.7
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 8.0e-48 196.1 282 36.5
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.8e-45 187.6 127 75.6
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.0e-35 154.8 187 46.5
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 4.5e-35 153.7 110 65.5
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 1.1e-33 149.1 109 66.1
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.6e-32 144.1 208 36.1
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-30 138.7 88 73.9
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 4.6e-27 127.1 83 69.9
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 5.0e-26 123.6 83 67.5
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 6.6e-26 123.2 146 46.6
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 8.6e-26 122.9 100 60.0
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.3e-21 109.0 128 43.8
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.7e-18 98.6 114 46.5
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 3.9e-18 97.4 244 36.5
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 2.3e-15 88.2 211 32.2
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 2.2e-13 81.6 98 43.9
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.1e-09 69.3 90 41.1
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.2e-08 65.9 41 73.2
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 4.0e-07 60.8 157 35.0
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 8.9e-07 59.7 113 35.4


User provided reference genes

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