Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16694 Selenicereus undatus HOM05D003115 ORTHO05D003595 3.4e-62 241.5 125 100.0
Hund29080 Selenicereus undatus HOM05D003115 ORTHO05D003595 1.8e-39 166.0 131 71.8
Hund29082 Selenicereus undatus HOM05D003115 ORTHO05D003595 1.8e-39 166.0 131 71.8
EL10Ac3g07463 Beta vulgaris HOM05D003115 ORTHO05D003595 1.7e-29 132.9 131 56.5
Ah.04g149340 Amaranthus hybridus HOM05D003115 ORTHO05D003595 2.3e-26 122.5 131 55.0
AUR62020852 Chenopodium quinoa HOM05D003115 ORTHO05D003595 8.9e-26 120.6 131 51.1
AUR62018566 Chenopodium quinoa HOM05D003115 ORTHO05D003595 1.3e-24 116.7 131 48.9
QL04p081909 Quercus lobata HOM05D003115 ORTHO05D003595 5.4e-23 111.3 132 47.7
TWI56G0473 Tripterygium wilfordii HOM05D003115 ORTHO05D003595 7.0e-23 110.9 133 47.4
Nn4g23612 Nelumbo nucifera HOM05D003115 ORTHO05D003595 9.2e-23 110.5 128 46.9
GSVIVG01021009001 Vitis vinifera HOM05D003115 ORTHO05D003595 1.6e-22 109.8 133 46.6
Manes.15G056200 Manihot esculenta HOM05D003115 ORTHO05D003595 1.0e-21 107.1 133 46.6
TAR636G1491 Trochodendron aralioides HOM05D003115 ORTHO05D003595 6.6e-21 104.4 128 46.1
Dinv16255 Davidia involucrata HOM05D003115 ORTHO05D003595 3.3e-20 102.1 137 45.3
CiPaw.14G076100 Carya illinoinensis HOM05D003115 ORTHO05D003595 1.6e-19 99.8 131 45.0
Cfa009508 Carpinus fangiana HOM05D003115 ORTHO05D003595 6.2e-19 97.8 131 43.5
Prupe.3G077100 Prunus persica HOM05D003115 ORTHO05D003595 6.2e-19 97.8 130 45.4
Solyc09g092240.3 Solanum lycopersicum HOM05D003115 ORTHO05D003595 6.2e-19 97.8 136 43.4
Sopen09g035170 Solanum pennellii HOM05D003115 ORTHO05D003595 6.2e-19 97.8 136 43.4
Aqoxy5G00431 Aquilegia oxysepala HOM05D003115 ORTHO05D003595 2.3e-18 95.9 130 41.5
Cpa.g.sc83.40 Carica papaya HOM05D003115 ORTHO05D003595 2.3e-18 95.9 133 43.6
SGA_v2.0_scaffold5G03024 Striga asiatica HOM05D003115 ORTHO05D003595 2.3e-18 95.9 143 42.7
Nitab4.5_0012127g0010 Nicotiana tabacum HOM05D003115 ORTHO05D003595 3.1e-18 95.5 110 48.2
Glyma.18G016000 Glycine max HOM05D003115 ORTHO05D003595 4.0e-18 95.1 134 44.8
MBI17_g03746_MAGBIO Magnolia biondii HOM05D003115 ORTHO05D003595 5.2e-18 94.7 127 42.5
MD17G1201300 Malus domestica HOM05D003115 ORTHO05D003595 5.2e-18 94.7 130 43.1
Phvul.001G253000 Phaseolus vulgaris HOM05D003115 ORTHO05D003595 5.2e-18 94.7 131 45.0
Cfa010533 Carpinus fangiana HOM05D003115 ORTHO05D003595 6.8e-18 94.4 131 42.7
Potri.001G318800 Populus trichocarpa HOM05D003115 ORTHO05D003595 6.8e-18 94.4 124 46.0
Actinidia35847 Actinidia chinensis HOM05D003115 ORTHO05D003595 8.9e-18 94.0 112 50.0
Sabra16G0201800 Salix brachista HOM05D003115 ORTHO05D003595 8.9e-18 94.0 124 46.8
COL.COLO4_33741 Corchorus olitorius HOM05D003115 ORTHO05D003595 1.2e-17 93.6 122 44.3
CAN.G1155.21 Capsicum annuum HOM05D003115 ORTHO05D003595 1.5e-17 93.2 136 41.2
AL1G41060 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 2.0e-17 92.8 138 39.1
A03p60500 Brassica napus HOM05D003115 ORTHO05D003595 2.0e-17 92.8 131 38.2
Lj6C385T7 Lonicera japonica HOM05D003115 ORTHO05D003595 2.0e-17 92.8 120 45.0
PSO832G1670 Papaver somniferum HOM05D003115 ORTHO05D003595 2.6e-17 92.4 130 41.5
FAN09G2094 Fragaria x ananassa HOM05D003115 ORTHO05D003595 3.4e-17 92.0 131 42.0
PSO210G2420 Papaver somniferum HOM05D003115 ORTHO05D003595 3.4e-17 92.0 127 42.5
Thecc.04G196300 Theobroma cacao HOM05D003115 ORTHO05D003595 3.4e-17 92.0 133 41.4
C05p23800 Brassica napus HOM05D003115 ORTHO05D003595 7.5e-17 90.9 124 39.5
CDE07G0216 Ceratophyllum demersum HOM05D003115 ORTHO05D003595 7.5e-17 90.9 126 42.1
Ciclev10004117m.g Citrus clementina HOM05D003115 ORTHO05D003595 7.5e-17 90.9 131 44.3
FvH4_6g30710 Fragaria vesca HOM05D003115 ORTHO05D003595 7.5e-17 90.9 131 42.0
Oeu002918.1 Olea europaea HOM05D003115 ORTHO05D003595 7.5e-17 90.9 140 41.4
Peaxi162Scf00047g00136 Petunia axillaris HOM05D003115 ORTHO05D003595 9.8e-17 90.5 135 40.7
RcHm_v2.0_Chr2g0137101 Rosa chinensis HOM05D003115 ORTHO05D003595 9.8e-17 90.5 130 41.5
arahy.Tifrunner.gnm1.ann1.QS081X Arachis hypogaea HOM05D003115 ORTHO05D003595 1.3e-16 90.1 134 41.8
FAN02G0145 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.7e-16 89.7 131 41.2
FAN14G0460 Fragaria x ananassa HOM05D003115 ORTHO05D003595 1.7e-16 89.7 131 41.2
arahy.Tifrunner.gnm1.ann1.01WSAY Arachis hypogaea HOM05D003115 ORTHO05D003595 2.2e-16 89.4 134 41.8
Carub.0007s0955 Capsella rubella HOM05D003115 ORTHO05D003595 2.2e-16 89.4 133 37.6
FAN05G1620 Fragaria x ananassa HOM05D003115 ORTHO05D003595 2.2e-16 89.4 129 41.9
AT4G30990 Arabidopsis thaliana HOM05D003115 ORTHO05D003595 2.9e-16 89.0 129 38.0
Carub.0001s2398 Capsella rubella HOM05D003115 ORTHO05D003595 2.9e-16 89.0 134 38.8
DCAR_007830 Daucus carota HOM05D003115 ORTHO05D003595 3.7e-16 88.6 114 43.9
COL.COLO4_20215 Corchorus olitorius HOM05D003115 ORTHO05D003595 4.9e-16 88.2 133 40.6
Thhalv10009353m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 4.9e-16 88.2 130 37.7
AL1G38530 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 6.4e-16 87.8 134 36.6
CARHR238880 Cardamine hirsuta HOM05D003115 ORTHO05D003595 6.4e-16 87.8 129 38.0
Atru.chr4.1598 Acer truncatum HOM05D003115 ORTHO05D003595 1.1e-15 87.0 131 42.0
Sp7g28860 Schrenkiella parvula HOM05D003115 ORTHO05D003595 1.1e-15 87.0 131 37.4
Cc00_g09570 Coffea canephora HOM05D003115 ORTHO05D003595 1.4e-15 86.7 128 39.1
Thhalv10024182m.g Eutrema salsugineum HOM05D003115 ORTHO05D003595 1.9e-15 86.3 129 36.4
Gorai.011G152900 Gossypium raimondii HOM05D003115 ORTHO05D003595 3.2e-15 85.5 133 40.6
PGR119G1374 Punica granatum HOM05D003115 ORTHO05D003595 3.2e-15 85.5 131 39.7
THA.LOC104808700 Tarenaya hassleriana HOM05D003115 ORTHO05D003595 4.1e-15 85.1 132 40.9
ECA233G4989 Erigeron canadensis HOM05D003115 ORTHO05D003595 5.4e-15 84.7 116 44.0
Migut.B01882 Erythranthe guttata HOM05D003115 ORTHO05D003595 5.4e-15 84.7 113 43.4
Atru.chr10.1944 Acer truncatum HOM05D003115 ORTHO05D003595 7.0e-15 84.3 131 38.9
Cc00_g09610 Coffea canephora HOM05D003115 ORTHO05D003595 9.2e-15 84.0 138 36.2
Gohir.D10G137700 Gossypium hirsutum HOM05D003115 ORTHO05D003595 9.2e-15 84.0 133 39.8
Lsat_1_v5_gn_6_59340 Lactuca sativa HOM05D003115 ORTHO05D003595 1.2e-14 83.6 120 42.5
Cc00_g27550 Coffea canephora HOM05D003115 ORTHO05D003595 1.6e-14 83.2 138 37.0
Duzib212G0201 Durio zibethinus HOM05D003115 ORTHO05D003595 1.6e-14 83.2 133 39.8
BraA09t39538Z Brassica rapa HOM05D003115 ORTHO05D003595 2.1e-14 82.8 134 34.3
CSS0000754 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.1e-14 82.8 139 43.9
CSS0038204 Camellia sinensis var. sinensis HOM05D003115 ORTHO05D003595 2.1e-14 82.8 139 43.9
Lj6g0020396 Lotus japonicus HOM05D003115 ORTHO05D003595 2.1e-14 82.8 131 42.7
A09p40420 Brassica napus HOM05D003115 ORTHO05D003595 2.7e-14 82.4 134 38.1
MELO3C020422.2 Cucumis melo HOM05D003115 ORTHO05D003595 2.7e-14 82.4 132 37.1
Aa31LG2G19350 Aethionema arabicum HOM05D003115 ORTHO05D003595 3.5e-14 82.0 133 36.8
Gohir.A10G128200 Gossypium hirsutum HOM05D003115 ORTHO05D003595 3.5e-14 82.0 133 39.8
ATR0665G483 Amborella trichopoda HOM05D003115 ORTHO05D003595 7.8e-14 80.9 128 35.9
Carub.0005s0720 Capsella rubella HOM05D003115 ORTHO05D003595 1.0e-13 80.5 130 35.4
Medtr3g083970 Medicago truncatula HOM05D003115 ORTHO05D003595 1.0e-13 80.5 133 39.8
Lalb_Chr23g0269101 Lupinus albus HOM05D003115 ORTHO05D003595 2.3e-13 79.3 134 37.3
HanXRQChr17g0546471 Helianthus annuus HOM05D003115 ORTHO05D003595 3.0e-13 79.0 115 45.2
BcaNung02730 Brassica carinata HOM05D003115 ORTHO05D003595 3.9e-13 78.6 131 35.1
BolC7t46291H Brassica oleracea HOM05D003115 ORTHO05D003595 3.9e-13 78.6 131 35.1
SalBow3G3081 Salvia bowleyana HOM05D003115 ORTHO05D003595 3.9e-13 78.6 111 45.0
ClCG06G007990 Citrullus lanatus HOM05D003115 ORTHO05D003595 6.6e-13 77.8 136 38.2
AL7G21090 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 1.1e-12 77.0 131 34.4
CsaV3_2G011790 Cucumis sativus L. HOM05D003115 ORTHO05D003595 1.1e-12 77.0 132 34.8
PGSC0003DMG400007741 Solanum tuberosum HOM05D003115 ORTHO05D003595 1.5e-12 76.6 126 38.9
Sed0014363 Sechium edule HOM05D003115 ORTHO05D003595 1.9e-12 76.3 118 40.7
TPR.G14704 Trifolium pratense HOM05D003115 ORTHO05D003595 7.3e-12 74.3 115 42.6
Zm00001eb121880 Zea mays HOM05D003115 ORTHO05D003595 9.5e-12 73.9 131 34.4
BcaNung01550 Brassica carinata HOM05D003115 ORTHO05D003595 1.6e-11 73.2 131 32.8
C07p58370 Brassica napus HOM05D003115 ORTHO05D003595 1.6e-11 73.2 131 32.8
HPP92_007262 Vanilla planifolia HOM05D003115 ORTHO05D003595 2.1e-11 72.8 127 34.6
VMungo1383G2293 Vigna mungo HOM05D003115 ORTHO05D003595 2.1e-11 72.8 124 40.3
Psat0s3058g0040 Pisum sativum HOM05D003115 ORTHO05D003595 3.6e-11 72.0 119 42.9
Rhsim09G0059200 Rhododendron simsii HOM05D003115 ORTHO05D003595 3.6e-11 72.0 136 39.0
BcaC05g26355 Brassica carinata HOM05D003115 ORTHO05D003595 1.1e-10 70.5 116 35.3
unitig_578.g16273 Utricularia gibba HOM05D003115 ORTHO05D003595 1.4e-10 70.1 132 35.6
PGSC0003DMG400007742 Solanum tuberosum HOM05D000005 ORTHO05D003595 2.3e-10 69.3 57 63.2
Rhsim02G0023500 Rhododendron simsii HOM05D003115 ORTHO05D003595 8.9e-10 67.4 60 61.7
AUR62038226 Chenopodium quinoa HOM05D010117 ORTHO05D012431 4.4e-09 65.1 53 56.6
vmacro00444 Vaccinium macrocarpon HOM05D003115 ORTHO05D003595 3.7e-08 62.0 63 54.0
CARHR024920 Cardamine hirsuta HOM05D003115 ORTHO05D003595 4.9e-08 61.6 139 33.8
AL1G39310 Arabidopsis lyrata HOM05D003115 ORTHO05D003595 2.1e-06 56.2 105 32.4
Os01g0584800 Oryza sativa ssp. japonica HOM05D003115 ORTHO05D003595 3.5e-06 55.5 51 56.9
Mapoly0054s0075 Marchantia polymorpha HOM05D003115 ORTHO05D003595 4.6e-06 55.1 121 31.4


User provided reference genes

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