Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 3.0e-243 844.7 426 100.0
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 9.5e-221 770.0 426 90.1
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 1.6e-220 769.2 426 90.1
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 1.4e-219 766.1 426 89.4
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 3.1e-219 765.0 426 88.7
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 6.8e-219 763.8 426 88.7
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 8.3e-217 756.9 426 89.0
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 1.4e-216 756.1 438 87.4
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 9.2e-216 753.4 426 88.5
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 4.6e-215 751.1 426 86.4
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 6.0e-215 750.7 426 88.0
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 1.7e-214 749.2 425 87.5
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.3e-214 748.8 426 88.5
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 2.3e-214 748.8 426 88.5
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 3.9e-214 748.0 426 88.0
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 5.0e-214 747.7 426 88.0
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 6.6e-214 747.3 426 87.3
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.9e-213 745.7 426 88.0
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 7.3e-213 743.8 426 88.0
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 9.5e-213 743.4 426 86.4
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 1.2e-212 743.0 423 88.2
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 1.6e-212 742.7 426 86.9
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 1.6e-212 742.7 426 86.4
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 1.6e-212 742.7 426 87.6
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 2.1e-212 742.3 426 86.2
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 4.7e-212 741.1 426 86.6
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 8.1e-212 740.3 423 86.8
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 8.1e-212 740.3 426 85.7
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 1.4e-211 739.6 426 85.7
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 1.8e-211 739.2 426 86.2
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.8e-211 739.2 426 87.1
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 2.3e-211 738.8 426 86.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 5.2e-211 737.6 426 85.7
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.2e-210 736.5 426 85.9
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 2.0e-210 735.7 426 86.2
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 7.5e-210 733.8 426 86.4
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 1.3e-209 733.0 426 85.0
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 4.9e-209 731.1 426 85.2
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 6.4e-209 730.7 426 84.5
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 1.1e-208 729.9 418 87.3
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 3.2e-208 728.4 426 85.2
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 3.2e-208 728.4 425 85.4
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 3.2e-208 728.4 426 85.4
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 4.1e-208 728.0 426 84.7
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 1.6e-207 726.1 426 85.2
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 2.7e-207 725.3 426 84.3
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.5e-207 724.9 423 85.6
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 3.5e-207 724.9 426 84.3
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.6e-207 724.5 425 84.5
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.0e-207 724.2 425 84.5
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 2.3e-206 722.2 426 84.0
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.3e-206 722.2 425 84.5
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 3.0e-206 721.8 422 85.3
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 3.9e-206 721.5 426 84.0
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 5.1e-206 721.1 423 85.1
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 6.6e-206 720.7 423 84.4
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 8.6e-206 720.3 426 84.0
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.9e-205 719.2 450 81.8
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 2.5e-205 718.8 426 83.6
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 2.5e-205 718.8 426 83.6
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 2.5e-205 718.8 426 83.8
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 3.3e-205 718.4 426 83.6
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 3.3e-205 718.4 426 83.6
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.3e-205 718.4 426 83.1
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 3.3e-205 718.4 422 84.4
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 4.3e-205 718.0 426 83.8
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 4.3e-205 718.0 426 85.9
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 5.6e-205 717.6 426 84.7
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 5.6e-205 717.6 426 83.6
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 7.3e-205 717.2 426 83.3
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 7.3e-205 717.2 416 86.1
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 1.6e-204 716.1 426 83.8
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.8e-204 715.3 426 83.1
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 3.6e-204 714.9 426 83.3
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 6.2e-204 714.1 426 83.3
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 8.1e-204 713.8 426 83.3
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 1.1e-203 713.4 426 83.3
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 1.4e-203 713.0 426 83.3
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 1.4e-203 713.0 422 84.4
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 6.8e-203 710.7 421 83.6
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.9e-203 710.3 439 81.5
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 1.5e-202 709.5 421 83.4
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 2.6e-202 708.8 426 81.7
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-201 706.1 415 84.8
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 2.9e-201 705.3 472 78.0
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 8.4e-201 703.7 423 82.0
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 1.4e-200 703.0 416 83.9
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 1.4e-200 703.0 425 80.7
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 6.0e-199 697.6 414 84.1
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 1.9e-197 692.6 425 79.5
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 2.4e-195 685.6 423 81.1
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 6.9e-195 684.1 426 79.3
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 9.0e-195 683.7 423 80.9
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.4e-194 681.4 426 78.4
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 9.9e-194 680.2 421 79.1
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 3.8e-193 678.3 426 78.4
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.3e-190 669.8 426 80.0
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.3e-190 669.8 426 79.6
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 2.3e-190 669.1 426 78.9
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 2.3e-190 669.1 426 79.1
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 3.9e-190 668.3 423 79.0
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.9e-189 666.0 434 79.0
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 6.2e-188 661.0 426 78.2
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 2.4e-187 659.1 611 59.7
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.5e-186 656.4 426 79.3
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.2e-185 652.5 416 79.1
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 2.9e-185 652.1 414 79.7
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.9e-185 652.1 424 75.7
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.9e-185 651.4 476 72.5
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-184 650.2 420 76.4
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.9e-184 649.4 443 75.2
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.2e-183 646.7 421 75.8
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 8.7e-182 640.6 421 75.3
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.1e-181 640.2 417 78.2
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.5e-181 639.0 424 73.8
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.8e-180 635.6 418 77.5
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 4.5e-178 628.2 423 76.8
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 2.4e-176 622.5 402 78.4
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.3e-174 616.7 354 85.9
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 1.1e-173 613.6 365 83.3
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 3.3e-173 612.1 423 71.4
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.2e-172 607.4 417 72.7
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.8e-171 606.3 413 72.9
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-171 605.5 407 73.5
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 3.1e-171 605.5 426 71.4
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.2e-167 593.6 411 73.2
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 1.6e-167 593.2 411 72.0
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 2.7e-167 592.4 352 84.7
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-165 587.0 414 72.5
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 1.5e-165 586.6 431 69.8
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 3.3e-165 585.5 341 84.8
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.2e-162 577.0 345 81.4
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 7.6e-162 574.3 432 69.0
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 3.8e-161 572.0 361 79.5
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 3.8e-161 572.0 416 71.2
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 5.7e-157 558.1 412 65.5
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.2e-156 554.3 404 68.3
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 5.3e-155 551.6 315 88.6
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-148 528.9 400 67.0
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 5.0e-145 518.5 435 63.2
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 2.5e-144 516.2 303 82.8
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 7.0e-139 498.0 423 61.2
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.5e-136 489.6 414 63.0
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.0e-134 482.6 282 84.8
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.1e-131 474.2 287 81.2
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 4.5e-130 468.8 443 58.5
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 1.5e-117 427.2 238 88.7
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.4e-115 420.6 432 51.2
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 3.0e-105 386.3 252 75.4
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 2.6e-101 373.2 433 46.7
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 2.0e-93 347.1 465 45.2
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 2.6e-85 320.1 172 91.3
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 1.7e-84 317.4 410 43.2
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 4.3e-80 302.8 199 77.4
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 8.7e-73 278.5 239 61.9
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 4.0e-70 269.6 154 83.1
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 4.5e-69 266.2 165 78.8
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.2e-61 241.5 166 73.5
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.1e-59 235.0 253 55.7
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 4.3e-56 223.0 158 72.8
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 9.0e-54 215.3 161 65.8
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 1.9e-35 154.5 96 80.2
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 1.3e-31 141.7 87 78.2
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 2.8e-31 140.6 83 81.9
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 5.9e-29 132.9 217 39.6
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 5.9e-29 132.9 126 59.5
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 4.8e-23 113.2 73 80.8
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 2.9e-20 104.0 58 84.5
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 1.5e-19 101.7 55 85.5
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 3.6e-18 97.1 124 46.8
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 8.0e-18 95.9 158 41.1
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 4.4e-16 90.1 96 56.2
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 5.7e-16 89.7 64 64.1
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 4.8e-15 86.7 231 30.3
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 3.5e-13 80.5 48 83.3
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 9.4e-11 72.4 110 40.0
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 2.1e-10 71.2 70 52.9
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 1.4e-09 68.6 42 73.8
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 1.4e-09 68.6 47 74.5
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 3.0e-09 67.4 47 68.1
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 4.0e-09 67.0 38 86.8
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 8.8e-09 65.9 44 70.5
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 2.2e-07 61.2 30 86.7


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