Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 5.8e-130 467.6 245 100.0
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 9.3e-96 354.0 227 80.6
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 8.2e-92 340.9 228 80.7
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 6.9e-91 337.8 231 77.5
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.1e-87 326.2 217 74.7
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 1.0e-86 323.9 225 75.1
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 3.9e-86 322.0 205 78.5
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 8.8e-86 320.9 217 73.7
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.1e-85 320.5 189 82.5
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 2.0e-85 319.7 217 73.3
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 7.4e-85 317.8 217 73.7
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 1.3e-84 317.0 217 72.8
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 1.3e-84 317.0 217 72.8
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.7e-84 316.6 187 81.3
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 2.2e-84 316.2 220 74.1
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 2.8e-84 315.8 220 74.1
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 6.3e-84 314.7 187 80.2
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 6.3e-84 314.7 212 72.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 8.2e-84 314.3 217 72.8
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.1e-83 313.9 224 72.8
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.1e-83 313.9 212 75.0
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.1e-83 313.9 205 75.6
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.4e-83 313.5 217 73.3
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.8e-83 313.2 187 79.7
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.4e-83 312.8 187 79.7
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 3.1e-83 312.4 205 74.6
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 4.1e-83 312.0 225 70.7
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 4.1e-83 312.0 203 75.4
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 5.3e-83 311.6 205 73.7
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 6.9e-83 311.2 217 73.3
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 9.1e-83 310.8 224 72.3
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 9.1e-83 310.8 201 77.1
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 1.2e-82 310.5 187 79.7
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.5e-82 310.1 206 74.3
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.5e-82 310.1 220 73.6
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.5e-82 310.1 187 79.1
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 2.0e-82 309.7 201 76.6
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 2.0e-82 309.7 206 73.8
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 2.0e-82 309.7 187 79.1
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.0e-82 309.7 221 73.8
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 2.6e-82 309.3 187 78.6
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 3.4e-82 308.9 212 73.1
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 4.5e-82 308.5 213 73.7
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 7.7e-82 307.8 188 78.7
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 1.3e-81 307.0 200 76.0
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 1.3e-81 307.0 200 76.0
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.7e-81 306.6 213 71.4
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.7e-81 306.6 199 75.4
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 2.2e-81 306.2 220 73.2
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.9e-81 305.8 210 73.8
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 3.8e-81 305.4 187 78.6
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 5.0e-81 305.1 231 69.7
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 6.5e-81 304.7 223 68.6
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.5e-81 304.7 220 72.7
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.4e-80 303.5 187 79.7
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 1.9e-80 303.1 203 74.4
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.5e-80 302.8 192 76.6
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 4.2e-80 302.0 231 68.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 5.5e-80 301.6 230 68.3
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 5.5e-80 301.6 210 71.4
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 7.2e-80 301.2 218 69.7
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.6e-79 300.1 203 71.4
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 2.1e-79 299.7 203 72.4
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 2.7e-79 299.3 230 67.8
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 4.7e-79 298.5 230 67.4
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 6.1e-79 298.1 210 71.4
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 7.9e-79 297.7 230 66.5
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.0e-78 297.4 230 67.4
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.8e-78 296.6 192 77.6
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 1.8e-78 296.6 224 67.9
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 3.9e-78 295.4 228 67.1
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 3.9e-78 295.4 224 68.3
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 1.1e-77 293.9 205 70.2
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.5e-77 293.5 237 67.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.0e-77 293.1 230 67.8
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.0e-77 293.1 200 71.5
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.0e-77 293.1 200 71.5
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 5.7e-77 291.6 188 71.8
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.4e-75 287.0 187 73.3
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.4e-75 286.2 201 69.7
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 5.3e-75 285.0 187 72.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 5.3e-75 285.0 187 73.3
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 9.1e-75 284.3 230 63.5
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.0e-74 283.1 187 73.3
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.6e-74 282.7 224 67.0
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 5.9e-74 281.6 198 69.2
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 7.7e-74 281.2 216 65.7
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.9e-72 276.6 187 70.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 2.1e-71 273.1 187 72.7
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 5.2e-70 268.5 206 64.1
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 8.8e-62 241.1 146 78.1
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 3.1e-59 232.6 189 59.8
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.1e-56 224.2 128 84.4
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 4.2e-56 222.2 151 73.5
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 4.5e-50 202.2 165 64.2
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 2.3e-46 189.9 231 49.4
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 5.2e-46 188.7 194 52.6
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.2e-46 188.7 150 65.3
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 8.9e-46 188.0 152 59.2
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 5.7e-45 185.3 231 48.9
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 9.2e-43 177.9 131 67.2
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 7.8e-42 174.9 185 49.7
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 6.4e-36 155.2 241 41.5
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 4.1e-35 152.5 118 67.8
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.6e-34 149.1 125 67.2
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.9e-32 143.7 86 79.1
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.1e-30 137.9 98 66.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.4e-30 137.5 132 50.8
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.3e-30 136.7 102 68.6
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 6.8e-30 135.2 208 40.4
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 6.8e-30 135.2 187 41.7
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 6.4e-28 128.6 125 56.8
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.4e-27 127.5 112 59.8
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 1.0e-25 121.3 137 51.8
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 3.2e-19 99.8 60 78.3
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.0e-17 94.7 84 59.5
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 8.1e-15 85.1 51 80.4
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 5.8e-13 79.0 65 58.5
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 9.3e-11 71.6 55 65.5
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 6.0e-10 68.9 43 69.8
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 1.3e-09 67.8 43 79.1
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.1e-08 64.7 68 52.9
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 4.0e-06 56.2 51 52.9
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.0e-06 55.1 46 52.2


User provided reference genes

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