Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16417 Selenicereus undatus HOM05D004917 ORTHO05D005954 9.1e-101 370.2 177 100.0
Potri.014G012100 Populus trichocarpa HOM05D004917 ORTHO05D005954 4.1e-61 238.4 148 77.0
Sabra14G0006700 Salix brachista HOM05D004917 ORTHO05D005954 9.2e-61 237.3 148 76.4
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 2.7e-60 235.7 148 74.3
RcHm_v2.0_Chr2g0108761 Rosa chinensis HOM05D004917 ORTHO05D005954 2.7e-60 235.7 149 76.5
Zm00001eb215580 Zea mays HOM05D004917 ORTHO05D005954 2.7e-60 235.7 149 75.2
Eucgr.H02332 Eucalyptus grandis HOM05D004917 ORTHO05D005954 7.8e-60 234.2 149 75.2
Sc07g0000430 Simmondsia chinensis HOM05D004917 ORTHO05D005954 7.8e-60 234.2 141 80.1
Atru.chr3.1060 Acer truncatum HOM05D004917 ORTHO05D005954 1.0e-59 233.8 146 77.4
Duzib147G0189 Durio zibethinus HOM05D004917 ORTHO05D005954 1.0e-59 233.8 140 80.0
Prupe.6G216800 Prunus persica HOM05D004917 ORTHO05D005954 1.0e-59 233.8 149 75.2
TAR628G1580 Trochodendron aralioides HOM05D004917 ORTHO05D005954 1.3e-59 233.4 148 75.7
FvH4_1g18250 Fragaria vesca HOM05D004917 ORTHO05D005954 1.7e-59 233.0 149 75.2
Hma1.2p1_0424F.1_g150480 Hydrangea macrophylla HOM05D004917 ORTHO05D005954 1.7e-59 233.0 145 77.2
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 1.7e-59 233.0 148 75.7
FAN23G1748 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.0e-59 232.3 149 75.8
GSVIVG01004399001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.0e-59 232.3 148 75.0
GSVIVG01007168001 Vitis vinifera HOM05D004917 ORTHO05D005954 3.0e-59 232.3 148 75.0
Psat4g080360 Pisum sativum HOM05D004917 ORTHO05D005954 3.9e-59 231.9 148 75.0
RcHm_v2.0_Chr2g0108751 Rosa chinensis HOM05D004917 ORTHO05D005954 3.9e-59 231.9 149 75.2
Cc07_g07360 Coffea canephora HOM05D004917 ORTHO05D005954 5.1e-59 231.5 149 73.2
Eucgr.H02333 Eucalyptus grandis HOM05D004917 ORTHO05D005954 5.1e-59 231.5 144 76.4
Oeu013341.1 Olea europaea HOM05D004917 ORTHO05D005954 6.6e-59 231.1 140 78.6
Cfa004388 Carpinus fangiana HOM05D004917 ORTHO05D005954 8.6e-59 230.7 141 76.6
PSO017G2968 Papaver somniferum HOM05D004917 ORTHO05D005954 8.6e-59 230.7 141 77.3
PSO170G3850 Papaver somniferum HOM05D004917 ORTHO05D005954 8.6e-59 230.7 141 77.3
FAN19G2004 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.1e-58 230.3 141 78.0
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 1.1e-58 230.3 145 75.9
Manes.13G109000 Manihot esculenta HOM05D004917 ORTHO05D005954 1.5e-58 229.9 141 77.3
Actinidia16409 Actinidia chinensis HOM05D004917 ORTHO05D005954 1.9e-58 229.6 143 76.2
Os03g0729200 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 1.9e-58 229.6 145 73.8
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 2.5e-58 229.2 140 76.4
Thecc.01G076300 Theobroma cacao HOM05D004917 ORTHO05D005954 2.5e-58 229.2 146 76.0
FvH4_1g18230 Fragaria vesca HOM05D004917 ORTHO05D005954 3.3e-58 228.8 149 74.5
FAN19G0182 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.3e-58 228.8 149 74.5
Nn5g30667 Nelumbo nucifera HOM05D004917 ORTHO05D005954 4.3e-58 228.4 148 75.7
Ah.03g140710 Amaranthus hybridus HOM05D004917 ORTHO05D005954 5.6e-58 228.0 136 79.4
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 5.6e-58 228.0 144 75.7
Lalb_Chr11g0075991 Lupinus albus HOM05D004917 ORTHO05D005954 5.6e-58 228.0 145 75.2
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 5.6e-58 228.0 141 76.6
Nitab4.5_0000036g0150 Nicotiana tabacum HOM05D004917 ORTHO05D005954 7.3e-58 227.6 148 72.3
Lj4g0024725 Lotus japonicus HOM05D004917 ORTHO05D005954 9.5e-58 227.3 148 73.0
Thecc.01G076400 Theobroma cacao HOM05D004917 ORTHO05D005954 9.5e-58 227.3 145 75.9
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 9.5e-58 227.3 148 73.0
Glyma.17G158500 Glycine max HOM05D004917 ORTHO05D005954 1.2e-57 226.9 145 74.5
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.2e-57 226.9 140 77.1
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.2e-57 226.9 140 77.1
FAN26G0787 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.6e-57 226.5 149 73.8
Medtr4g097500 Medicago truncatula HOM05D004917 ORTHO05D005954 2.1e-57 226.1 149 72.5
TWI74G1062 Tripterygium wilfordii HOM05D004917 ORTHO05D005954 2.8e-57 225.7 140 77.1
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 3.6e-57 225.3 140 76.4
DCAR_000455 Daucus carota HOM05D004917 ORTHO05D005954 4.7e-57 224.9 149 72.5
DCAR_014953 Daucus carota HOM05D004917 ORTHO05D005954 4.7e-57 224.9 149 72.5
Ca_22095_v3 Cicer arietinum L. HOM05D004917 ORTHO05D005954 6.2e-57 224.6 145 73.8
MD02G1189600 Malus domestica HOM05D004917 ORTHO05D005954 8.1e-57 224.2 145 72.4
Lsat_1_v5_gn_4_160020 Lactuca sativa HOM05D004917 ORTHO05D005954 1.1e-56 223.8 150 72.7
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.4e-56 223.4 145 73.1
Gorai.008G085700 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.8e-56 223.0 146 73.3
Phvul.003G232900 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 1.8e-56 223.0 139 76.3
GSVIVG01007444001 Vitis vinifera HOM05D004917 ORTHO05D005954 1.8e-56 223.0 143 75.5
CiPaw.01G001900 Carya illinoinensis HOM05D004917 ORTHO05D005954 2.3e-56 222.6 148 73.0
PGSC0003DMG400003322 Solanum tuberosum HOM05D004917 ORTHO05D005954 2.3e-56 222.6 148 70.9
Cpa.g.sc673.2 Carica papaya HOM05D004917 ORTHO05D005954 3.1e-56 222.2 144 74.3
ClCG02G012210 Citrullus lanatus HOM05D004917 ORTHO05D005954 3.1e-56 222.2 140 75.0
FAN28G2407 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.1e-56 222.2 146 74.0
Sopen02g014680 Solanum pennellii HOM05D004917 ORTHO05D005954 3.1e-56 222.2 148 70.9
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 4.0e-56 221.9 136 77.9
Migut.L00432 Erythranthe guttata HOM05D004917 ORTHO05D005954 4.0e-56 221.9 134 76.9
Gohir.D12G076900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 5.2e-56 221.5 146 72.6
Sed0017274 Sechium edule HOM05D004917 ORTHO05D005954 5.2e-56 221.5 141 75.2
MELO3C020846.2 Cucumis melo HOM05D004917 ORTHO05D005954 6.8e-56 221.1 140 74.3
FvH4_1g18251 Fragaria vesca HOM05D004917 ORTHO05D005954 6.8e-56 221.1 142 75.4
Peaxi162Scf00449g00417 Petunia axillaris HOM05D004917 ORTHO05D005954 6.8e-56 221.1 143 73.4
Ciclev10026314m.g Citrus clementina HOM05D004917 ORTHO05D005954 8.9e-56 220.7 148 72.3
ECA232G4556 Erigeron canadensis HOM05D004917 ORTHO05D005954 8.9e-56 220.7 150 72.0
Phvul.003G232800 Phaseolus vulgaris HOM05D004917 ORTHO05D005954 8.9e-56 220.7 140 76.4
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 8.9e-56 220.7 148 70.9
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 1.2e-55 220.3 148 70.3
SEGI_14750 Sequoiadendron giganteum HOM05D004917 ORTHO05D005954 1.2e-55 220.3 141 71.6
CsaV3_2G016370 Cucumis sativus L. HOM05D004917 ORTHO05D005954 1.5e-55 219.9 138 75.4
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 2.0e-55 219.5 141 72.3
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 2.0e-55 219.5 140 75.0
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 2.0e-55 219.5 136 75.7
THA.LOC104827747 Tarenaya hassleriana HOM05D004917 ORTHO05D005954 3.4e-55 218.8 145 73.1
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 5.8e-55 218.0 148 70.3
arahy.Tifrunner.gnm1.ann1.1K25L2 Arachis hypogaea HOM05D004917 ORTHO05D005954 5.8e-55 218.0 141 75.9
arahy.Tifrunner.gnm1.ann1.UB5R5Q Arachis hypogaea HOM05D004917 ORTHO05D005954 5.8e-55 218.0 141 75.9
AUR62007540 Chenopodium quinoa HOM05D004917 ORTHO05D005954 7.6e-55 217.6 141 74.5
COL.COLO4_11615 Corchorus olitorius HOM05D004917 ORTHO05D005954 7.6e-55 217.6 148 70.9
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 7.6e-55 217.6 136 75.0
CAN.G775.1 Capsicum annuum HOM05D004917 ORTHO05D005954 9.9e-55 217.2 148 69.6
C09p10750 Brassica napus HOM05D004917 ORTHO05D005954 1.3e-54 216.9 141 72.3
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 1.3e-54 216.9 141 72.3
HanXRQChr09g0262071 Helianthus annuus HOM05D004917 ORTHO05D005954 1.3e-54 216.9 143 72.7
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 1.7e-54 216.5 148 69.6
AUR62004032 Chenopodium quinoa HOM05D004917 ORTHO05D005954 2.2e-54 216.1 141 73.8
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 2.9e-54 215.7 148 70.3
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 4.9e-54 214.9 141 70.9
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 4.9e-54 214.9 141 70.9
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 6.4e-54 214.5 148 69.6
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 8.3e-54 214.2 141 70.9
BcaC04g23243 Brassica carinata HOM05D004917 ORTHO05D005954 3.2e-53 212.2 141 69.5
BolC9t53970H Brassica oleracea HOM05D004917 ORTHO05D005954 3.2e-53 212.2 141 70.2
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 3.2e-53 212.2 143 73.4
SGA_v2.0_scaffold79G25603 Striga asiatica HOM05D004917 ORTHO05D005954 5.4e-53 211.5 132 76.5
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 1.6e-52 209.9 144 68.8
ATR0739G130 Amborella trichopoda HOM05D004917 ORTHO05D005954 2.1e-52 209.5 141 72.3
Migut.L00430 Erythranthe guttata HOM05D004917 ORTHO05D005954 3.3e-50 202.2 149 63.8
PSO170G4503 Papaver somniferum HOM05D004917 ORTHO05D005954 1.6e-49 199.9 136 71.3
PSO017G4293 Papaver somniferum HOM05D004917 ORTHO05D005954 2.1e-49 199.5 136 69.9
RcHm_v2.0_Chr2g0108771 Rosa chinensis HOM05D004917 ORTHO05D005954 8.9e-48 194.1 153 66.7
CDE02G4371 Ceratophyllum demersum HOM05D004917 ORTHO05D005954 2.0e-47 193.0 143 65.7
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 4.4e-47 191.8 136 67.6
Zm00001eb056030 Zea mays HOM05D004917 ORTHO05D005954 9.9e-47 190.7 129 68.2
Nitab4.5_0007379g0030 Nicotiana tabacum HOM05D004917 ORTHO05D005954 3.2e-45 185.7 143 63.6
Lj4A165T49 Lonicera japonica HOM05D004917 ORTHO05D005954 1.2e-44 183.7 148 64.2
FAN26G1896 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.6e-44 183.3 149 63.8
Haze_15025 Corylus avellana HOM05D004917 ORTHO05D005954 1.3e-43 180.3 141 63.1
CSS0005558 Camellia sinensis var. sinensis HOM05D004917 ORTHO05D005954 1.7e-43 179.9 148 62.2
FAN23G2689 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.0e-43 179.1 154 61.0
Dinv26959 Davidia involucrata HOM05D004917 ORTHO05D005954 9.6e-42 174.1 110 76.4
Pp3c27_7100 Physcomitrium patens HOM05D004917 ORTHO05D005954 2.9e-38 162.5 140 51.4
GSVIVG01004400001 Vitis vinifera HOM05D004917 ORTHO05D005954 5.4e-37 158.3 101 73.3
QL06p038908 Quercus lobata HOM05D004917 ORTHO05D005954 7.9e-36 154.5 101 72.3
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 1.7e-35 153.3 146 49.3
MBI16_g06077_MAGBIO Magnolia biondii HOM05D004917 ORTHO05D005954 4.3e-34 148.7 140 57.1
ATR0739G160 Amborella trichopoda HOM05D004917 ORTHO05D005954 7.6e-31 137.9 99 63.6
unitig_37.g11996 Utricularia gibba HOM05D004917 ORTHO05D005954 1.2e-28 130.6 85 71.8
FAN28G0406 Fragaria x ananassa HOM05D004917 ORTHO05D005954 1.5e-23 113.6 101 59.4
FAN26G2723 Fragaria x ananassa HOM05D004917 ORTHO05D005954 3.4e-23 112.5 160 40.6
MCO14G127 Micromonas commoda HOM05D004917 ORTHO05D005954 3.4e-23 112.5 159 40.9
Sabra07G0005500 Salix brachista HOM05D004917 ORTHO05D005954 2.5e-18 96.3 126 47.6
Potri.007G007201 Populus trichocarpa HOM05D004917 ORTHO05D005954 9.6e-18 94.4 69 69.6
Zm00001eb030360 Zea mays HOM05D004917 ORTHO05D005954 4.1e-16 89.0 55 78.2
PRCOL_00004664 Prasinoderma coloniale HOM05D004917 ORTHO05D005954 1.0e-14 84.3 137 38.0
arahy.Tifrunner.gnm1.ann1.F27BB1 Arachis hypogaea HOM05D004917 ORTHO05D005954 2.9e-14 82.8 53 75.5
MCO06G061 Micromonas commoda HOM05D004917 ORTHO05D005954 3.0e-11 72.8 133 35.3
QL02p069743 Quercus lobata HOM05D004917 ORTHO05D005954 1.6e-09 67.0 46 67.4
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 2.8e-09 66.2 43 69.8
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 2.4e-08 63.2 135 33.3
Haze_02356 Corylus avellana HOM05D004917 ORTHO05D005954 4.1e-08 62.4 49 61.2
GSVIVG01007167001 Vitis vinifera HOM05D004917 ORTHO05D005954 4.1e-08 62.4 39 79.5
Cre17.g697050 Chlamydomonas reinhardtii HOM05D004917 ORTHO05D005954 5.3e-08 62.0 204 24.5
MCO07G374 Micromonas commoda HOM05D004917 ORTHO05D005954 2.9e-06 56.2 67 41.8


User provided reference genes

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