Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 0.0e+00 1508.0 731 100.0
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 1.6e-151 540.8 678 45.0
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 4.7e-151 539.3 675 44.7
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 2.2e-140 503.8 668 43.1
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 4.9e-140 502.7 687 42.2
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 4.1e-139 499.6 679 43.3
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.2e-138 498.0 675 44.0
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 1.6e-138 497.7 664 42.6
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.6e-138 497.7 673 43.7
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 2.0e-138 497.3 682 43.1
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 1.3e-137 494.6 613 45.2
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 6.6e-137 492.3 690 41.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 2.8e-135 486.9 692 41.5
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 3.6e-135 486.5 561 50.1
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.0e-135 485.3 710 42.1
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.0e-133 480.7 679 41.8
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-133 480.7 673 43.1
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 5.7e-133 479.2 680 42.8
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 9.8e-133 478.4 664 43.5
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 2.2e-132 477.2 707 41.6
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 3.7e-132 476.5 665 43.3
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 6.4e-132 475.7 712 40.3
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 8.3e-132 475.3 665 43.2
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.2e-130 471.5 683 40.6
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 2.7e-130 470.3 597 43.7
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 1.7e-129 467.6 671 42.3
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 8.6e-129 465.3 679 39.5
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 2.1e-127 460.7 679 39.0
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 9.8e-125 451.8 676 38.0
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 1.7e-124 451.1 674 41.2
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.2e-122 444.9 665 39.5
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 2.0e-122 444.1 666 40.1
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 2.3e-121 440.7 680 39.1
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 3.3e-120 436.8 674 39.6
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.8e-118 431.0 683 41.3
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 1.2e-117 428.3 672 39.3
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 2.0e-117 427.6 423 53.9
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 2.6e-117 427.2 666 38.7
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 2.2e-116 424.1 667 37.9
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 1.1e-115 421.8 680 40.0
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 9.2e-115 418.7 671 38.6
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 6.6e-113 412.5 680 37.9
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 1.5e-112 411.4 673 38.5
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.3e-112 410.2 680 37.6
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 4.3e-112 409.8 678 37.9
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 9.5e-112 408.7 654 38.8
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 3.6e-111 406.8 669 37.2
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 6.2e-111 406.0 677 37.5
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 1.1e-110 405.2 568 40.8
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 5.2e-110 402.9 684 37.9
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 2.0e-109 401.0 682 37.0
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 8.4e-108 395.6 681 37.4
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 1.1e-107 395.2 680 36.8
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 1.9e-107 394.4 570 39.3
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 5.4e-107 392.9 694 35.9
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 4.6e-106 389.8 708 35.6
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 7.8e-106 389.0 681 37.2
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 5.1e-105 386.3 678 35.7
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 5.1e-105 386.3 668 36.7
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 2.5e-104 384.0 682 35.6
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 5.6e-104 382.9 695 37.6
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 7.3e-104 382.5 670 35.2
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 2.1e-103 380.9 676 37.9
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 2.1e-103 380.9 542 40.4
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 2.8e-103 380.6 639 39.3
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 6.2e-103 379.4 678 33.8
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 6.2e-103 379.4 678 34.4
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 1.2e-101 375.2 601 38.4
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 2.0e-101 374.4 669 35.7
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 2.6e-101 374.0 722 35.0
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 3.4e-101 373.6 701 35.2
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 4.4e-101 373.2 556 40.3
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 1.1e-99 368.6 672 35.7
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 2.4e-99 367.5 682 35.9
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 1.6e-98 364.8 597 39.7
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 2.5e-96 357.5 593 36.6
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 6.2e-95 352.8 681 35.4
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.5e-93 348.2 669 35.4
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 7.6e-93 345.9 677 31.9
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 6.4e-92 342.8 707 35.8
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 2.3e-89 334.3 592 36.3
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 7.4e-88 329.3 738 33.5
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 8.1e-87 325.9 667 32.7
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 8.1e-87 325.9 667 32.7
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 3.1e-86 323.9 680 32.6
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 1.1e-83 315.5 499 38.9
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 4.6e-82 310.1 669 32.9
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 4.8e-79 300.1 599 34.1
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 4.0e-78 297.0 705 30.8
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 5.8e-77 293.1 414 42.5
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 1.8e-73 281.6 433 39.5
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 1.0e-68 265.8 664 30.3
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 1.7e-68 265.0 688 31.8
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 6.5e-68 263.1 688 31.7
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 1.8e-62 245.0 359 41.8
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 5.9e-61 240.0 693 31.2
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 1.4e-54 218.8 402 34.8
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 1.7e-52 211.8 322 38.5
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 8.8e-49 199.5 371 37.2
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 4.1e-46 190.7 333 40.2
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-40 171.8 198 48.0
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 6.1e-34 150.2 359 32.3
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 2.7e-29 134.8 172 41.3
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 4.0e-25 120.9 166 43.4
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 7.8e-21 106.7 93 54.8
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.9e-19 102.1 138 45.7
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.8e-17 95.5 657 24.0
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 2.6e-16 91.7 475 24.8
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.4e-15 87.0 60 70.0
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 6.4e-15 87.0 60 70.0
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.2e-13 82.8 398 25.9
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 1.6e-10 72.4 233 26.6
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 2.8e-10 71.6 121 35.5
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 6.2e-10 70.5 169 33.7
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 6.8e-09 67.0 329 21.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 4.4e-08 64.3 56 50.0
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.1e-06 59.7 56 48.2


User provided reference genes

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