Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16257 Selenicereus undatus HOM05D000009 ORTHO05D000008 5.3e-147 524.2 250 100.0
CiPaw.13G006100 Carya illinoinensis HOM05D000009 ORTHO05D000008 4.7e-10 69.3 149 31.5
Cc00_g32460 Coffea canephora HOM05D000009 ORTHO05D000008 8.0e-10 68.6 153 32.7
Glyma.03G037400 Glycine max HOM05D000009 ORTHO05D000008 1.4e-09 67.8 155 32.9
Glyma.03G039300 Glycine max HOM05D000009 ORTHO05D000008 1.4e-09 67.8 155 34.2
Glyma.03G037300 Glycine max HOM05D000009 ORTHO05D000008 4.0e-09 66.2 151 34.4
Glyma.03G037100 Glycine max HOM05D000009 ORTHO05D000008 6.8e-09 65.5 153 33.3
VMungo0331G1297 Vigna mungo HOM05D000009 ORTHO05D000008 6.8e-09 65.5 163 33.7
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 8.8e-09 65.1 146 31.5
Haze_03492 Corylus avellana HOM05D000009 ORTHO05D000008 1.2e-08 64.7 69 46.4
Haze_03448 Corylus avellana HOM05D000009 ORTHO05D000008 2.6e-08 63.5 69 47.8
Haze_03450 Corylus avellana HOM05D000009 ORTHO05D000008 2.6e-08 63.5 69 47.8
Haze_03489 Corylus avellana HOM05D000009 ORTHO05D000008 3.4e-08 63.2 70 45.7
Haze_25221 Corylus avellana HOM05D000009 ORTHO05D000008 4.4e-08 62.8 151 35.8
CAN.G309.46 Capsicum annuum HOM05D000009 ORTHO05D000008 9.8e-08 61.6 69 39.1
Glyma.03G034800 Glycine max HOM05D000009 ORTHO05D000008 1.3e-07 61.2 131 34.4
Haze_03490 Corylus avellana HOM05D000113 ORTHO05D000008 2.2e-07 60.5 69 47.8
CAN.G309.42 Capsicum annuum HOM05D000009 ORTHO05D000008 2.8e-07 60.1 147 30.6
EL10Ac2g04391 Beta vulgaris HOM05D000009 ORTHO05D000008 3.7e-07 59.7 132 36.4
CAN.G309.41 Capsicum annuum HOM05D000009 ORTHO05D000008 3.7e-07 59.7 151 29.1
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.7e-07 59.7 145 29.0
GSVIVG01007029001 Vitis vinifera HOM05D000009 ORTHO05D000008 3.7e-07 59.7 75 42.7
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 4.9e-07 59.3 146 30.1
Haze_03081 Corylus avellana HOM05D000009 ORTHO05D000008 8.3e-07 58.5 153 32.7
Medtr3g070650 Medicago truncatula HOM05D000009 ORTHO05D000008 8.3e-07 58.5 150 31.3
GSVIVG01000871001 Vitis vinifera HOM05D000009 ORTHO05D000008 8.3e-07 58.5 78 37.2
MD07G1045100 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-06 57.8 153 32.0
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.8e-06 57.4 143 28.7
PGSC0003DMG401014048 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.8e-06 57.4 67 41.8
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.4e-06 57.0 69 39.1
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.1e-06 56.6 69 39.1
LjContig00357g0019766 Lotus japonicus HOM05D000009 ORTHO05D000008 3.1e-06 56.6 165 30.3
Atru.chr11.2450 Acer truncatum HOM05D000005 ORTHO05D000008 4.1e-06 56.2 139 30.9
Medtr3g071010 Medicago truncatula HOM05D000009 ORTHO05D000008 4.1e-06 56.2 150 30.7
Medtr3g071040 Medicago truncatula HOM05D000009 ORTHO05D000008 4.1e-06 56.2 150 30.7
Medtr3g071080 Medicago truncatula HOM05D000009 ORTHO05D000008 4.1e-06 56.2 150 30.7
PGSC0003DMG400002982 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.1e-06 56.2 69 39.1
AUR62023115 Chenopodium quinoa HOM05D000009 ORTHO05D000008 5.4e-06 55.8 140 35.7
QL04p014669 Quercus lobata HOM05D000009 ORTHO05D000008 5.4e-06 55.8 69 40.6
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.0e-06 55.5 146 31.5
PGSC0003DMG400018574 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.0e-06 55.5 70 38.6


User provided reference genes

Program Settings