Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 2.0e-62 242.3 126 100.0
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 2.1e-51 205.7 126 84.9
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.7e-48 196.1 123 83.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.4e-47 193.0 126 79.4
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 3.5e-46 188.3 126 78.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 8.6e-45 183.7 126 77.0
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.5e-44 183.0 115 80.0
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.5e-44 182.2 117 77.8
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 5.6e-44 181.0 110 80.9
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 5.6e-44 181.0 110 80.9
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 5.6e-44 181.0 112 81.2
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.2e-43 179.9 126 74.6
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.7e-43 177.9 116 75.9
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.7e-43 177.9 116 75.9
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.7e-43 177.9 110 80.0
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 4.7e-43 177.9 124 75.0
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 8.1e-43 177.2 125 74.4
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 8.1e-43 177.2 124 73.4
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 8.1e-43 177.2 124 73.4
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.8e-42 176.0 120 73.3
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.8e-42 176.0 120 73.3
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.8e-42 176.0 121 74.4
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 4.0e-42 174.9 114 75.4
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.0e-42 174.9 124 72.6
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 5.2e-42 174.5 124 74.2
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.0e-41 172.6 111 77.5
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 3.4e-41 171.8 111 78.4
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 4.4e-41 171.4 114 77.2
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 4.4e-41 171.4 124 72.6
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 9.8e-41 170.2 120 73.3
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 9.8e-41 170.2 120 70.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 1.3e-40 169.9 126 72.2
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 1.3e-40 169.9 112 75.9
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.7e-40 169.5 116 73.3
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 1.7e-40 169.5 114 73.7
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.7e-40 169.5 112 75.9
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.7e-40 169.5 120 72.5
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.9e-40 168.7 120 70.8
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 3.7e-40 168.3 119 73.9
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 4.9e-40 167.9 120 72.5
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 4.9e-40 167.9 111 74.8
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.1e-39 166.8 113 74.3
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 1.1e-39 166.8 114 72.8
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 4.1e-39 164.9 120 71.7
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 7.1e-39 164.1 114 72.8
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.2e-39 163.7 122 71.3
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.2e-39 163.7 122 71.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.2e-38 163.3 114 72.8
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.2e-38 163.3 111 73.9
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 1.2e-38 163.3 120 70.0
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.6e-38 162.9 116 68.1
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.6e-38 162.9 115 71.3
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-38 162.5 120 68.3
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 2.7e-38 162.2 108 74.1
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.7e-38 162.2 120 70.0
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 3.5e-38 161.8 110 74.5
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 4.6e-38 161.4 112 72.3
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 6.0e-38 161.0 120 70.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 6.0e-38 161.0 119 68.9
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 7.8e-38 160.6 118 70.3
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 7.8e-38 160.6 119 68.9
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.0e-37 160.2 121 68.6
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 1.0e-37 160.2 107 72.9
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 1.7e-37 159.5 118 66.9
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.7e-37 159.5 120 65.8
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 3.0e-37 158.7 113 70.8
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 5.1e-37 157.9 119 68.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 5.1e-37 157.9 113 68.1
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 5.1e-37 157.9 124 66.9
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 4.3e-36 154.8 118 66.1
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 5.6e-36 154.5 117 69.2
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.1e-34 150.2 110 68.2
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 4.0e-34 148.3 120 65.0
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 2.0e-33 146.0 114 64.0
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.4e-33 144.8 111 67.6
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.7e-32 142.9 112 67.9
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.7e-32 142.9 104 73.1
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 4.9e-32 141.4 104 65.4
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 4.9e-32 141.4 104 64.4
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.9e-32 141.4 106 64.2
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 8.4e-32 140.6 109 66.1
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.1e-31 137.5 125 61.6
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-30 136.3 99 67.7
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 6.0e-30 134.4 111 63.1
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.8e-30 134.0 124 57.3
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.3e-29 133.3 93 67.7
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.0e-29 132.1 113 60.2
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.9e-28 129.4 78 82.1
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 4.3e-28 128.3 112 58.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 7.3e-28 127.5 76 82.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.8e-27 125.6 119 56.3
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.1e-26 123.6 76 80.3
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.4e-26 123.2 118 57.6
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.1e-26 122.1 111 58.6
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.0e-25 119.4 78 74.4
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.0e-25 119.4 78 74.4
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 1.7e-24 116.3 121 52.1
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 6.4e-24 114.4 93 61.3
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 7.1e-23 110.9 97 60.8
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-22 109.4 125 52.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.1e-22 109.4 115 53.9
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 4.6e-22 108.2 120 50.8
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 7.8e-22 107.5 124 49.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-21 107.1 84 67.9
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.7e-21 106.3 105 48.6
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 3.0e-21 105.5 92 62.0
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 3.9e-21 105.1 107 50.5
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 5.1e-21 104.8 95 56.8
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 8.7e-21 104.0 76 67.1
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.5e-20 103.2 74 67.6
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.9e-20 102.8 73 68.5
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.9e-20 102.8 73 68.5
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.5e-20 102.4 110 49.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 3.3e-20 102.1 71 69.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 3.3e-20 102.1 71 69.0
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.3e-20 102.1 71 69.0
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 4.3e-20 101.7 78 70.5
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 7.3e-20 100.9 74 66.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 9.6e-20 100.5 73 65.8
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.3e-19 100.1 109 47.7
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 8.1e-19 97.4 88 62.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 6.9e-18 94.4 105 48.6
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.2e-17 93.6 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-17 93.6 59 78.0
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 1.6e-14 83.2 97 42.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.7e-13 79.7 75 45.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.5e-09 66.6 62 54.8
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.8e-09 64.7 55 56.4
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.7e-08 63.2 44 70.5
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-06 57.0 111 37.8


User provided reference genes

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