Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16113 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.0e-195 685.6 360 100.0
Hund19692 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.9e-153 546.2 323 90.4
Hund15925 Selenicereus undatus HOM05D001576 ORTHO05D000401 4.1e-100 369.0 271 72.0
Hund21771 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.4e-47 194.5 264 39.4
Hund15479 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.3e-42 177.9 279 40.1
Hund01990 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.8e-40 170.2 405 34.3
Hund20099 Selenicereus undatus HOM05D000214 ORTHO05D000131 5.3e-39 166.0 312 36.2
Hund24086 Selenicereus undatus HOM05D000214 ORTHO05D011049 9.0e-39 165.2 384 34.1
Hund03698 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.5e-38 164.5 259 37.5
Hund18413 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.6e-38 163.7 259 37.5
Hund23756 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.7e-38 162.2 256 37.5
Hund20929 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.0e-37 161.8 259 37.1
Hund11062 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.9e-36 157.5 318 34.3
Hund03592 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.2e-36 155.6 318 34.6
Hund07454 Selenicereus undatus HOM05D000214 ORTHO05D000131 9.4e-36 155.2 352 33.5
Hund14643 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.0e-33 147.5 384 33.1
Hund05815 Selenicereus undatus HOM05D000214 ORTHO05D011049 6.3e-32 142.5 254 34.3
Hund04709 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.4e-31 140.6 261 34.9
Hund01102 Selenicereus undatus HOM05D018444 ORTHO05D011049 2.0e-30 137.5 344 34.9
Hund15911 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.7e-30 135.6 304 35.2
Hund19299 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.1e-28 131.7 252 35.7
Hund30207 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.4e-26 124.8 259 33.2
Hund30209 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.4e-26 124.8 259 33.2
Hund11163 Selenicereus undatus HOM05D000214 ORTHO05D000131 8.8e-26 122.1 312 31.7
Hund13670 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.4e-25 119.0 333 29.7
Hund22147 Selenicereus undatus HOM05D000923 ORTHO05D000720 1.1e-23 115.2 309 31.7
Hund24323 Selenicereus undatus HOM05D000214 ORTHO05D000131 7.0e-23 112.5 208 36.1
Hund22537 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.2e-22 111.7 232 32.8
Hund08898 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.0e-22 110.9 306 31.4
Hund19562 Selenicereus undatus HOM05D001576 ORTHO05D000401 3.5e-22 110.2 264 37.5
Hund26421 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.3e-21 108.2 256 32.8
Hund25619 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.7e-21 107.8 204 35.8
Hund14605 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.1e-19 100.9 175 37.7
Hund12116 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.0e-18 98.6 140 40.0
Hund24895 Selenicereus undatus HOM05D000214 ORTHO05D000131 1.1e-17 95.1 216 33.8
Hund21925 Selenicereus undatus HOM05D001576 ORTHO05D000401 2.6e-17 94.0 220 33.2
Hund15688 Selenicereus undatus HOM05D000214 ORTHO05D011049 6.3e-16 89.4 161 34.2
Hund18206 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.8e-15 87.8 252 31.0
Hund00547 Selenicereus undatus HOM05D000214 ORTHO05D000131 4.5e-14 83.2 187 32.6
Hund23146 Selenicereus undatus HOM05D018444 ORTHO05D011049 4.5e-14 83.2 395 27.3
Glyma.17G168800 Glycine max HOM05D001576 ORTHO05D000401 7.7e-14 82.4 204 32.8
Medtr4g063670 Medicago truncatula HOM05D000589 ORTHO05D000401 3.8e-13 80.1 216 32.4
Glyma.07G140900 Glycine max HOM05D001576 ORTHO05D000401 1.5e-12 78.2 219 30.6
Glyma.19G095100 Glycine max HOM05D000589 ORTHO05D000401 1.9e-12 77.8 225 29.8
Hund14693 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.5e-12 77.4 187 31.0
Hund00482 Selenicereus undatus HOM05D000214 ORTHO05D011049 5.5e-12 76.3 180 30.6
Hund10036 Selenicereus undatus HOM05D000214 ORTHO05D000131 5.5e-12 76.3 130 35.4
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-11 75.1 297 27.9
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-11 74.7 297 27.9
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-11 74.7 297 27.9
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.7e-11 73.9 297 27.9
Hund11187 Selenicereus undatus HOM05D018444 ORTHO05D011049 2.7e-11 73.9 138 39.1
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.6e-11 73.6 297 27.9
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.1e-11 72.8 291 28.2
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.0e-11 72.4 297 27.6
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 8.0e-11 72.4 237 25.7
SGA_v2.0_scaffold76G25122 Striga asiatica HOM05D001576 ORTHO05D000401 8.0e-11 72.4 165 29.7
BolC2t11945H Brassica oleracea HOM05D000589 ORTHO05D000401 2.3e-10 70.9 142 35.9
CANSAT56G3242 Cannabis sativa HOM05D002730 ORTHO05D003261 2.3e-10 70.9 144 37.5
BolC2t08934H Brassica oleracea HOM05D000589 ORTHO05D000401 4.0e-10 70.1 150 32.7
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 4.0e-10 70.1 141 35.5
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 4.0e-10 70.1 141 36.2
BolC5t34603H Brassica oleracea HOM05D000589 ORTHO05D000401 8.8e-10 68.9 200 27.5
BcaC09g48715 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-09 68.6 147 32.7
Glyma.06G285600 Glycine max HOM05D000589 ORTHO05D000401 1.5e-09 68.2 250 30.4
Glyma.09G103200 Glycine max HOM05D000589 ORTHO05D000401 1.5e-09 68.2 251 26.3
BcaC06g34273 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-09 67.8 214 29.4
BolC9t53773H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-09 67.4 181 28.7
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 2.6e-09 67.4 143 32.2
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-09 67.0 125 32.8
BolC2t10503H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-09 67.0 144 34.0
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.4e-09 67.0 235 31.1
Ca_08337_v3 Cicer arietinum L. HOM05D002397 ORTHO05D002667 4.4e-09 66.6 228 28.1
Psat7g167200 Pisum sativum HOM05D000589 ORTHO05D000401 4.4e-09 66.6 223 27.4
BcaC09g51077 Brassica carinata HOM05D000589 ORTHO05D000401 5.7e-09 66.2 126 34.1
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 5.7e-09 66.2 144 32.6
Psat4g220720 Pisum sativum HOM05D000589 ORTHO05D000401 5.7e-09 66.2 223 27.4
AT5G41240 Arabidopsis thaliana HOM05D002591 ORTHO05D002791 7.5e-09 65.9 130 31.5
BolC1t03974H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-09 65.9 172 30.2
BolC7t42127H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-09 65.9 142 33.1
Medtr0867s0010 Medicago truncatula HOM05D001576 ORTHO05D000401 7.5e-09 65.9 282 25.9
Medtr1g051185 Medicago truncatula HOM05D000589 ORTHO05D000401 9.8e-09 65.5 219 28.8
Psat4g018520 Pisum sativum HOM05D000589 ORTHO05D000401 9.8e-09 65.5 156 30.1
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-08 64.7 130 32.3
BolC7t44270H Brassica oleracea HOM05D000126 ORTHO05D000085 2.2e-08 64.3 141 34.0
Psat3g071440 Pisum sativum HOM05D000589 ORTHO05D000401 2.2e-08 64.3 219 27.4
Psat7g215720 Pisum sativum HOM05D000589 ORTHO05D000401 2.2e-08 64.3 219 27.4
Hund17532 Selenicereus undatus HOM05D000214 ORTHO05D000131 2.2e-08 64.3 42 81.0
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 2.8e-08 63.9 126 32.5
BolC7t43030H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-08 63.9 148 29.7
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 2.8e-08 63.9 187 26.7
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-08 63.9 247 27.5
Os04g0286500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.8e-08 63.9 130 33.1
Carub.0001s3179 Capsella rubella HOM05D000589 ORTHO05D000401 3.7e-08 63.5 221 29.4
BolC8t52393H Brassica oleracea HOM05D000589 ORTHO05D000401 4.8e-08 63.2 135 31.9
BolC9t54927H Brassica oleracea HOM05D000589 ORTHO05D000401 4.8e-08 63.2 165 27.9
BraA09t36774Z Brassica rapa HOM05D001499 ORTHO05D001560 4.8e-08 63.2 142 28.2
Psat5g257800 Pisum sativum HOM05D000214 ORTHO05D000401 4.8e-08 63.2 217 27.2
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 6.3e-08 62.8 124 33.9
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 6.3e-08 62.8 181 33.1
BolC9t58301H Brassica oleracea HOM05D000589 ORTHO05D000401 6.3e-08 62.8 130 32.3
Psat0s4925g0040 Pisum sativum HOM05D000589 ORTHO05D000401 6.3e-08 62.8 115 33.0
Carub.0004s1930 Capsella rubella HOM05D000589 ORTHO05D000401 8.3e-08 62.4 151 29.8
Os08g0225900 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.3e-08 62.4 130 32.3
Os08g0561000 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.3e-08 62.4 130 32.3
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.3e-08 62.4 238 24.8
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.3e-08 62.4 238 24.8
Os12g0543800 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 8.3e-08 62.4 238 24.8
BolC8t47046H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-07 62.0 150 28.7
Hund14842 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.1e-07 62.0 121 34.7
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.4e-07 61.6 220 25.9
AT5G41220 Arabidopsis thaliana HOM05D002591 ORTHO05D002791 1.8e-07 61.2 171 29.2
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 1.8e-07 61.2 170 27.1
Medtr4g083510 Medicago truncatula HOM05D000589 ORTHO05D000401 1.8e-07 61.2 294 24.5
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 2.4e-07 60.8 171 26.9
FvH4_3g26413 Fragaria vesca HOM05D001576 ORTHO05D000401 2.4e-07 60.8 221 28.1
BcaC04g22975 Brassica carinata HOM05D001499 ORTHO05D001560 3.1e-07 60.5 142 27.5
BolC9t54228H Brassica oleracea HOM05D001499 ORTHO05D001560 3.1e-07 60.5 142 27.5
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-07 60.5 261 24.5
Psat5g094880 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-07 60.5 140 30.0
BolC4t27712H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-07 60.1 144 29.2
CiPaw.05G228800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.1e-07 60.1 239 26.4
BcaC03g18152 Brassica carinata HOM05D000589 ORTHO05D000401 5.4e-07 59.7 133 30.8
BolC2t11587H Brassica oleracea HOM05D000589 ORTHO05D000401 5.4e-07 59.7 146 30.8
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 5.4e-07 59.7 227 26.4
Psat0s1573g0200 Pisum sativum HOM05D000589 ORTHO05D000401 5.4e-07 59.7 109 34.9
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 5.4e-07 59.7 214 27.1
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 5.4e-07 59.7 225 28.9
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 5.4e-07 59.7 225 28.9
BcaC03g17387 Brassica carinata HOM05D000589 ORTHO05D000401 7.0e-07 59.3 133 30.8
BolC6t37820H Brassica oleracea HOM05D000589 ORTHO05D000401 7.0e-07 59.3 175 26.9
Glyma.04G114000 Glycine max HOM05D000589 ORTHO05D000401 7.0e-07 59.3 111 36.0
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 7.0e-07 59.3 220 25.5
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 7.0e-07 59.3 220 25.5
BolC6t39513H Brassica oleracea HOM05D000589 ORTHO05D000401 9.1e-07 58.9 149 29.5
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.1e-07 58.9 243 24.7
Medtr7g088160 Medicago truncatula HOM05D002397 ORTHO05D000401 9.1e-07 58.9 228 23.2
BolC6t38390H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-06 58.5 113 31.0
Medtr7g107340 Medicago truncatula HOM05D000589 ORTHO05D000401 1.2e-06 58.5 347 25.9
Psat2g006720 Pisum sativum HOM05D000589 ORTHO05D000401 1.2e-06 58.5 155 29.0
Hund26347 Selenicereus undatus HOM05D000214 ORTHO05D011049 1.2e-06 58.5 126 34.1
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-06 57.8 171 29.2
BolC6t35673H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-06 57.8 147 32.0
BolC7t42664H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-06 57.8 113 37.2
BolC9t58087H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-06 57.8 123 29.3
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.7e-06 57.4 285 26.3
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-06 57.4 264 22.7
Psat0ss1279g0240 Pisum sativum HOM05D000589 ORTHO05D000401 2.7e-06 57.4 172 27.9
Hund24757 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.7e-06 57.4 155 29.7
BcaB02g09876 Brassica carinata HOM05D000589 ORTHO05D000401 3.5e-06 57.0 123 31.7
BolC4t25880H Brassica oleracea HOM05D000589 ORTHO05D000401 3.5e-06 57.0 157 28.7
BolC5t31716H Brassica oleracea HOM05D000589 ORTHO05D000401 3.5e-06 57.0 140 30.7
BolC6t36890H Brassica oleracea HOM05D000589 ORTHO05D000401 3.5e-06 57.0 165 27.9
HanXRQChr10g0281341 Helianthus annuus HOM05D007803 ORTHO05D000401 3.5e-06 57.0 239 26.8
RcHm_v2.0_Chr6g0270241 Rosa chinensis HOM05D001576 ORTHO05D000401 3.5e-06 57.0 128 31.2
Hund20762 Selenicereus undatus HOM05D000214 ORTHO05D000131 3.5e-06 57.0 159 28.3
BolC5t29855H Brassica oleracea HOM05D000589 ORTHO05D000401 4.5e-06 56.6 126 33.3
BolC7t44420H Brassica oleracea HOM05D000589 ORTHO05D000401 4.5e-06 56.6 200 30.0
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.5e-06 56.6 235 24.3
Glyma.12G112700 Glycine max HOM05D001576 ORTHO05D000401 4.5e-06 56.6 209 28.2
Medtr8g045460 Medicago truncatula HOM05D006550 ORTHO05D008630 4.5e-06 56.6 128 30.5
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 5.9e-06 56.2 154 28.6
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 5.9e-06 56.2 115 32.2
BolC5t31626H Brassica oleracea HOM05D000589 ORTHO05D000401 5.9e-06 56.2 120 31.7
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 7.7e-06 55.8 145 30.3
BolC3t16377H Brassica oleracea HOM05D000589 ORTHO05D000401 7.7e-06 55.8 170 25.9
BolC5t32685H Brassica oleracea HOM05D000589 ORTHO05D000401 7.7e-06 55.8 137 26.3
Carub.0004s0729 Capsella rubella HOM05D000589 ORTHO05D000401 7.7e-06 55.8 110 37.3
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-06 55.8 305 22.6
Glyma.01G062500 Glycine max HOM05D001576 ORTHO05D000401 7.7e-06 55.8 279 26.2
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 7.7e-06 55.8 260 23.1
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 7.7e-06 55.8 325 24.0
Hund01096 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.7e-06 55.8 58 44.8


User provided reference genes

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