Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 2.1e-129 465.7 234 100.0
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.4e-39 166.0 121 73.6
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 4.8e-33 145.6 105 75.2
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 8.2e-33 144.8 114 65.8
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.1e-32 144.4 112 66.1
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 5.3e-32 142.1 110 62.7
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 7.0e-32 141.7 117 64.1
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 9.1e-32 141.4 160 54.4
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.2e-31 141.0 103 68.9
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 2.0e-31 140.2 115 66.1
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 5.9e-31 138.7 90 76.7
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 5.9e-31 138.7 135 52.6
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 7.7e-31 138.3 116 63.8
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.3e-30 137.5 90 74.4
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.3e-30 137.5 112 64.3
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 1.7e-30 137.1 112 60.7
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 1.7e-30 137.1 112 60.7
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 2.2e-30 136.7 114 62.3
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 2.2e-30 136.7 115 62.6
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 2.2e-30 136.7 118 60.2
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 2.9e-30 136.3 151 50.3
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 2.9e-30 136.3 97 70.1
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.9e-30 136.3 90 73.3
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.9e-30 136.3 134 53.0
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 2.9e-30 136.3 134 53.0
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.8e-30 136.0 90 73.3
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 5.0e-30 135.6 114 61.4
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 6.5e-30 135.2 90 72.2
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 6.5e-30 135.2 112 62.5
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 8.5e-30 134.8 90 72.2
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.5e-30 134.8 97 69.1
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.5e-29 134.0 90 71.1
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.9e-29 133.7 112 63.4
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 3.2e-29 132.9 90 72.2
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 4.2e-29 132.5 114 60.5
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 4.2e-29 132.5 113 58.4
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 5.5e-29 132.1 113 60.2
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 5.5e-29 132.1 114 61.4
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 7.2e-29 131.7 117 59.8
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 7.2e-29 131.7 112 63.4
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 7.2e-29 131.7 128 55.5
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 1.6e-28 130.6 106 62.3
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 2.1e-28 130.2 87 70.1
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 2.7e-28 129.8 115 58.3
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.7e-28 129.8 117 59.0
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 2.7e-28 129.8 110 60.9
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 3.6e-28 129.4 122 59.8
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 3.6e-28 129.4 101 64.4
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 3.6e-28 129.4 101 64.4
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 3.6e-28 129.4 117 58.1
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 4.7e-28 129.0 118 58.5
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 4.7e-28 129.0 115 58.3
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 6.1e-28 128.6 111 61.3
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 1.0e-27 127.9 115 60.0
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 1.0e-27 127.9 126 55.6
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.0e-27 127.9 129 53.5
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 1.0e-27 127.9 113 57.5
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 1.4e-27 127.5 113 57.5
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.4e-27 127.5 123 55.3
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 1.4e-27 127.5 114 57.9
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.4e-27 127.5 116 61.2
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.8e-27 127.1 111 59.5
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 2.3e-27 126.7 122 59.0
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.2e-27 125.6 119 54.6
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 8.8e-27 124.8 110 58.2
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 8.8e-27 124.8 90 65.6
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 8.8e-27 124.8 96 67.7
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.2e-26 124.4 90 66.7
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.2e-26 124.4 129 51.9
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.5e-26 124.0 112 54.5
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 2.6e-26 123.2 111 59.5
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 3.3e-26 122.9 115 53.9
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 3.3e-26 122.9 114 57.9
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 4.4e-26 122.5 119 56.3
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 5.7e-26 122.1 92 60.9
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 5.7e-26 122.1 116 56.0
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 7.5e-26 121.7 122 53.3
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 7.5e-26 121.7 122 53.3
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 7.5e-26 121.7 122 53.3
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 9.7e-26 121.3 92 62.0
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 9.7e-26 121.3 92 62.0
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 9.7e-26 121.3 118 54.2
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.3e-25 120.9 126 55.6
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 1.7e-25 120.6 97 61.9
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 2.8e-25 119.8 102 57.8
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 3.7e-25 119.4 116 54.3
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 4.8e-25 119.0 134 48.5
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 4.8e-25 119.0 127 51.2
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 1.1e-24 117.9 99 59.6
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-24 117.9 99 59.6
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 1.1e-24 117.9 87 63.2
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 1.8e-24 117.1 94 58.5
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.8e-24 117.1 118 52.5
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.8e-24 117.1 118 52.5
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.8e-24 117.1 105 55.2
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 1.8e-24 117.1 81 66.7
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 1.8e-24 117.1 90 61.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 2.4e-24 116.7 115 51.3
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 3.1e-24 116.3 120 52.5
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 1.2e-23 114.4 115 50.4
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 1.2e-23 114.4 116 52.6
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 5.0e-22 109.0 102 57.8
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 5.0e-22 109.0 85 58.8
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.5e-21 107.5 91 56.0
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 9.4e-21 104.8 87 55.2
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 4.7e-20 102.4 75 64.0
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.8e-19 100.5 88 54.5
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 5.2e-19 99.0 112 49.1
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 8.3e-17 91.7 96 46.9
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 1.4e-16 90.9 90 56.7
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 4.1e-16 89.4 81 51.9
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 5.4e-16 89.0 76 65.8
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 9.1e-16 88.2 61 72.1
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 4.5e-15 85.9 71 59.2
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 4.5e-15 85.9 80 56.2
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.7e-14 84.0 116 43.1
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 1.7e-14 84.0 118 43.2
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 2.9e-14 83.2 66 62.1
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 1.1e-13 81.3 100 45.0
Hund13808 Selenicereus undatus HOM05D005411 ORTHO05D006463 7.2e-13 78.6 55 81.8
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 2.1e-12 77.0 66 57.6
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.0e-12 75.1 67 53.7
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 8.0e-12 75.1 67 53.7
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 1.5e-10 70.9 48 60.4
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 2.0e-10 70.5 56 55.4
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 8.3e-09 65.1 72 52.8
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 8.3e-09 65.1 72 52.8
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 8.3e-09 65.1 72 52.8
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 3.1e-08 63.2 72 51.4
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 1.2e-07 61.2 46 56.5
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 1.3e-06 57.8 52 59.6
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.9e-06 56.6 68 52.9
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 3.8e-06 56.2 47 53.2
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 6.6e-06 55.5 86 43.0
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 8.6e-06 55.1 78 42.3
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 8.6e-06 55.1 50 50.0


User provided reference genes

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