Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 2.0e-144 515.8 265 100.0
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 8.0e-77 291.2 202 77.7
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 1.8e-76 290.0 202 77.2
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 1.8e-76 290.0 203 78.3
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 4.4e-75 285.4 203 76.8
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 5.8e-75 285.0 203 75.9
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 3.2e-73 279.3 203 75.4
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 9.2e-73 277.7 201 74.6
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 4.6e-72 275.4 201 74.6
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 6.0e-72 275.0 204 73.5
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 1.3e-71 273.9 204 73.0
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 2.3e-71 273.1 198 75.3
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 1.1e-70 270.8 203 71.4
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 2.5e-70 269.6 201 72.1
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 4.3e-70 268.9 203 71.4
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 4.3e-70 268.9 204 71.6
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 5.6e-70 268.5 205 72.7
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 5.6e-70 268.5 199 71.9
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 1.2e-69 267.3 203 70.9
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 1.6e-69 266.9 205 71.7
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 1.6e-69 266.9 203 70.9
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 2.1e-69 266.5 203 71.9
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 2.8e-69 266.2 203 70.9
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 4.7e-69 265.4 205 72.2
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 4.7e-69 265.4 205 72.2
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 6.2e-69 265.0 199 72.4
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 6.2e-69 265.0 205 72.7
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 8.1e-69 264.6 205 71.2
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.1e-68 264.2 205 70.2
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 1.1e-68 264.2 272 57.7
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 1.4e-68 263.8 204 70.1
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 1.8e-68 263.5 203 69.5
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.8e-68 263.5 199 70.9
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 1.8e-68 263.5 205 71.2
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 3.1e-68 262.7 198 71.7
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 3.1e-68 262.7 201 70.6
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 4.0e-68 262.3 204 70.1
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 5.2e-68 261.9 201 69.2
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 6.8e-68 261.5 199 70.9
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 8.9e-68 261.2 199 70.4
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 1.2e-67 260.8 205 70.2
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 1.5e-67 260.4 205 68.3
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 2.0e-67 260.0 203 69.0
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 2.6e-67 259.6 199 70.4
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 2.6e-67 259.6 201 70.1
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 3.4e-67 259.2 201 67.7
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 4.4e-67 258.8 201 69.2
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 4.4e-67 258.8 203 68.5
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 5.8e-67 258.5 198 69.7
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 7.5e-67 258.1 198 70.7
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 9.9e-67 257.7 204 67.6
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 1.3e-66 257.3 199 69.8
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.7e-66 256.9 198 69.2
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.7e-66 256.9 198 69.2
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.7e-66 256.9 198 69.2
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 1.7e-66 256.9 205 69.3
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 1.7e-66 256.9 213 67.1
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 2.2e-66 256.5 198 69.2
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 2.2e-66 256.5 203 68.5
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 2.2e-66 256.5 203 68.5
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 2.2e-66 256.5 203 68.5
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 2.2e-66 256.5 203 68.5
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 6.4e-66 255.0 201 71.1
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 6.4e-66 255.0 198 69.2
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 6.4e-66 255.0 199 68.8
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 6.4e-66 255.0 199 68.8
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 1.1e-65 254.2 205 68.3
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 1.9e-65 253.4 205 68.3
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 1.9e-65 253.4 198 69.2
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 2.4e-65 253.1 204 66.7
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 3.2e-65 252.7 203 67.0
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 3.2e-65 252.7 204 66.7
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 5.4e-65 251.9 203 68.0
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 7.8e-64 248.1 199 66.3
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 1.0e-63 247.7 201 67.2
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 1.3e-63 247.3 198 67.7
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 2.3e-63 246.5 242 57.0
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 3.0e-63 246.1 201 66.7
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 5.1e-63 245.4 201 66.7
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 5.1e-63 245.4 206 67.5
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 1.5e-62 243.8 201 66.2
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 1.9e-62 243.4 201 66.2
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 2.5e-62 243.0 203 67.5
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 3.3e-62 242.7 201 65.7
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 4.3e-62 242.3 201 65.7
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 6.2e-61 238.4 201 64.2
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 1.1e-60 237.7 201 64.7
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 2.4e-60 236.5 201 64.2
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 2.4e-60 236.5 201 64.2
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 2.4e-60 236.5 201 64.2
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 2.4e-60 236.5 201 64.2
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 2.4e-60 236.5 201 64.2
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 4.0e-60 235.7 198 64.1
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 3.8e-58 229.2 194 65.5
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 1.6e-56 223.8 203 58.6
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 2.7e-56 223.0 200 61.5
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 4.6e-56 222.2 199 61.8
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 8.7e-55 218.0 203 60.6
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 2.2e-50 203.4 156 71.2
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.1e-48 196.8 203 57.6
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 9.9e-43 177.9 202 53.5
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 2.2e-42 176.8 168 60.7
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 2.2e-42 176.8 168 60.7
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 3.3e-38 162.9 199 48.2
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 1.8e-36 157.1 150 63.3
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.2e-35 154.5 204 49.5
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 1.7e-34 150.6 199 44.7
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 7.9e-32 141.7 131 58.0
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 3.4e-27 126.3 130 53.8
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 6.1e-24 115.5 203 37.9
Hund15164 Selenicereus undatus HOM05D010300 ORTHO05D012197 2.3e-23 113.6 76 77.6
Hund04318 Selenicereus undatus HOM05D010300 ORTHO05D007019 1.4e-20 104.4 76 72.4
Hund03711 Selenicereus undatus HOM05D010300 ORTHO05D007019 5.3e-20 102.4 71 74.6
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 1.2e-19 101.3 74 74.3
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 1.0e-18 98.2 64 81.2
Hund12492 Selenicereus undatus HOM05D010300 ORTHO05D007019 2.2e-18 97.1 76 69.7
Hund18062 Selenicereus undatus HOM05D010300 ORTHO05D007019 2.2e-18 97.1 76 69.7
Hund03634 Selenicereus undatus HOM05D010300 ORTHO05D007019 8.5e-18 95.1 76 68.4
Hund26370 Selenicereus undatus HOM05D010300 ORTHO05D007019 8.5e-18 95.1 76 68.4
Hund04970 Selenicereus undatus HOM05D010300 ORTHO05D383286 2.5e-17 93.6 69 72.5
Hund29872 Selenicereus undatus HOM05D010300 ORTHO05D007019 2.5e-17 93.6 69 72.5
Hund18265 Selenicereus undatus HOM05D010300 ORTHO05D007019 7.2e-17 92.0 68 72.1
Hund15410 Selenicereus undatus HOM05D010300 ORTHO05D383142 5.9e-11 72.4 89 47.2
Hund04204 Selenicereus undatus HOM05D010300 ORTHO05D007019 1.1e-09 68.2 66 56.1
Hund07510 Selenicereus undatus HOM05D010300 ORTHO05D007019 1.4e-09 67.8 31 100.0
Hund20583 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.4e-09 67.8 39 84.6
Hund18115 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.7e-08 62.8 44 70.5
Hund30647 Selenicereus undatus HOM05D010300 ORTHO05D007019 7.9e-08 62.0 28 100.0
Hund10194 Selenicereus undatus HOM05D010300 ORTHO05D000009 1.0e-07 61.6 31 90.3
Hund12685 Selenicereus undatus HOM05D000030 ORTHO05D000031 3.0e-07 60.1 44 68.2
Hund08025 Selenicereus undatus HOM05D000030 ORTHO05D000031 5.1e-07 59.3 31 83.9
Hund10195 Selenicereus undatus HOM05D010300 ORTHO05D012197 6.7e-07 58.9 44 65.9
Hund04633 Selenicereus undatus HOM05D010300 ORTHO05D012197 9.7e-06 55.1 30 83.3


User provided reference genes

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