Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 4.3e-53 211.1 108 100.0
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 9.7e-37 156.8 107 75.7
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 2.2e-20 102.4 99 55.6
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 7.7e-18 94.0 107 48.6
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.4e-16 89.7 107 49.5
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 7.2e-16 87.4 110 45.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 6.1e-15 84.3 111 44.1
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 1.0e-14 83.6 109 45.0
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 3.9e-14 81.6 107 43.0
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 5.2e-14 81.3 107 43.9
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.1e-13 80.1 107 43.9
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.5e-13 79.7 107 43.0
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 1.5e-13 79.7 114 45.6
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.0e-13 79.3 107 43.9
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 2.6e-13 79.0 108 42.6
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 2.6e-13 79.0 112 46.4
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 3.3e-13 78.6 107 42.1
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 5.7e-13 77.8 73 58.9
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 5.7e-13 77.8 110 46.4
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 5.7e-13 77.8 113 45.1
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 5.7e-13 77.8 107 44.9
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 7.4e-13 77.4 107 43.9
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 9.7e-13 77.0 73 57.5
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.7e-12 76.3 109 43.1
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 2.2e-12 75.9 107 41.1
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 2.2e-12 75.9 107 41.1
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 2.2e-12 75.9 107 42.1
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.2e-12 75.9 106 49.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 3.7e-12 75.1 111 41.4
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 4.8e-12 74.7 108 44.4
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 4.8e-12 74.7 108 46.3
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 4.8e-12 74.7 108 40.7
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 1.1e-11 73.6 111 41.4
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 1.1e-11 73.6 109 43.1
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 1.4e-11 73.2 108 44.4
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.4e-11 73.2 112 42.0
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 1.4e-11 73.2 109 41.3
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 2.4e-11 72.4 112 42.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 3.1e-11 72.0 112 42.0
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 3.1e-11 72.0 108 39.8
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 3.1e-11 72.0 109 37.6
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 3.1e-11 72.0 108 41.7
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 4.1e-11 71.6 110 38.2
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 4.1e-11 71.6 107 42.1
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 5.3e-11 71.2 106 39.6
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 7.0e-11 70.9 110 38.2
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 1.2e-10 70.1 111 42.3
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 1.6e-10 69.7 109 40.4
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 1.6e-10 69.7 108 42.6
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 4.5e-10 68.2 108 37.0
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 4.5e-10 68.2 108 41.7
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 4.5e-10 68.2 112 40.2
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 4.5e-10 68.2 108 41.7
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 5.9e-10 67.8 111 44.1
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 7.7e-10 67.4 107 42.1
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 7.7e-10 67.4 109 38.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 7.7e-10 67.4 110 40.9
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 7.7e-10 67.4 108 37.0
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 1.7e-09 66.2 107 41.1
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.7e-09 66.2 99 43.4
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.7e-09 66.2 110 40.0
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 2.2e-09 65.9 112 39.3
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 2.2e-09 65.9 109 38.5
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 2.9e-09 65.5 108 43.5
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.9e-09 65.5 108 39.8
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 3.8e-09 65.1 107 39.3
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 5.0e-09 64.7 109 37.6
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 6.5e-09 64.3 108 38.9
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 6.5e-09 64.3 107 36.4
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 8.5e-09 63.9 108 38.9
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 8.5e-09 63.9 108 39.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.1e-08 63.5 110 37.3
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 1.1e-08 63.5 108 39.8
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.1e-08 63.5 109 36.7
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.9e-08 62.8 107 38.3
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 7.2e-08 60.8 107 36.4
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 1.2e-07 60.1 107 33.6
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 1.2e-07 60.1 99 36.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 2.1e-07 59.3 113 34.5
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 2.1e-07 59.3 107 33.6
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 2.7e-07 58.9 107 41.1
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.6e-07 58.5 109 36.7
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 3.6e-07 58.5 115 36.5
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 3.6e-07 58.5 116 36.2
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 4.7e-07 58.2 112 33.9
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 8.0e-07 57.4 95 41.1
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 1.0e-06 57.0 101 34.7
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 1.4e-06 56.6 103 35.9
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 1.8e-06 56.2 102 34.3
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 4.0e-06 55.1 99 37.4
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 4.0e-06 55.1 111 31.5
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 5.2e-06 54.7 101 35.6
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 6.7e-06 54.3 124 32.3


User provided reference genes

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