Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15832 Selenicereus undatus HOM05D000294 ORTHO05D000177 5.6e-67 257.7 150 100.0
EL10Ac2g04245 Beta vulgaris HOM05D000294 ORTHO05D000177 6.7e-28 127.9 133 48.1
AUR62012367 Chenopodium quinoa HOM05D000294 ORTHO05D000177 1.6e-26 123.2 135 47.4
AUR62031495 Chenopodium quinoa HOM05D000294 ORTHO05D000177 8.2e-26 120.9 132 46.2
Lalb_Chr10g0104231 Lupinus albus HOM05D000294 ORTHO05D000177 9.3e-22 107.5 135 50.4
VMungo0647G2185 Vigna mungo HOM05D000294 ORTHO05D000177 2.3e-20 102.8 151 38.4
Phvul.008G238300 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 3.0e-20 102.4 148 37.8
Glyma.02G243100 Glycine max HOM05D000294 ORTHO05D000177 1.1e-19 100.5 133 39.8
LjContig00141g0020132 Lotus japonicus HOM05D000294 ORTHO05D000177 1.9e-19 99.8 135 52.6
Lalb_Chr17g0345981 Lupinus albus HOM05D000294 ORTHO05D000177 1.9e-19 99.8 146 43.8
Duzib138G1364 Durio zibethinus HOM05D000294 ORTHO05D000177 4.3e-19 98.6 135 39.3
Manes.01G121150 Manihot esculenta HOM05D000294 ORTHO05D000177 5.7e-19 98.2 135 39.3
Gorai.004G048900 Gossypium raimondii HOM05D000294 ORTHO05D000177 1.3e-18 97.1 135 39.3
Gohir.A08G039200 Gossypium hirsutum HOM05D000294 ORTHO05D000177 2.8e-18 95.9 137 40.1
arahy.Tifrunner.gnm1.ann1.QDSR5S Arachis hypogaea HOM05D000294 ORTHO05D000177 8.2e-18 94.4 138 38.4
Thecc.04G065400 Theobroma cacao HOM05D000294 ORTHO05D000177 1.4e-17 93.6 136 38.2
Gohir.D08G049400 Gossypium hirsutum HOM05D000294 ORTHO05D000177 1.8e-17 93.2 135 38.5
Lj6g0009382 Lotus japonicus HOM05D000294 ORTHO05D000177 5.3e-17 91.7 67 56.7
arahy.Tifrunner.gnm1.ann1.YU3LHJ Arachis hypogaea HOM05D000294 ORTHO05D000177 6.9e-17 91.3 135 37.8
vmacro18521 Vaccinium macrocarpon HOM05D000294 ORTHO05D000177 2.0e-16 89.7 90 46.7
Lalb_Chr10g0104221 Lupinus albus HOM05D000294 ORTHO05D000177 5.9e-16 88.2 147 36.7
TWI77G0264 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 1.7e-15 86.7 136 39.0
Rhsim10G0181000 Rhododendron simsii HOM05D039283 ORTHO05D000177 5.0e-15 85.1 73 53.4
Lalb_Chr17g0345991 Lupinus albus HOM05D000294 ORTHO05D000177 2.5e-14 82.8 139 35.3
arahy.Tifrunner.gnm1.ann1.NBZU38 Arachis hypogaea HOM05D000294 ORTHO05D000177 1.2e-13 80.5 92 45.7
DCAR_001088 Daucus carota HOM05D000294 ORTHO05D000177 1.6e-13 80.1 137 34.3
Oeu016323.1 Olea europaea HOM05D000294 ORTHO05D000177 2.7e-13 79.3 65 52.3
GSVIVG01012050001 Vitis vinifera HOM05D000294 ORTHO05D000177 2.3e-12 76.3 135 33.3
SGA_v2.0_scaffold313G48344 Striga asiatica HOM05D000294 ORTHO05D000177 6.7e-12 74.7 137 34.3
Migut.I00193 Erythranthe guttata HOM05D000294 ORTHO05D000177 2.5e-11 72.8 67 52.2
SalBow5G0576 Salvia bowleyana HOM05D000294 ORTHO05D000177 2.5e-11 72.8 56 53.6
Rhsim08G0019900 Rhododendron simsii HOM05D015679 ORTHO05D017801 2.2e-10 69.7 56 51.8
CAN.G834.4 Capsicum annuum HOM05D000294 ORTHO05D000177 3.7e-10 68.9 60 50.0
Cc05_g03420 Coffea canephora HOM05D000294 ORTHO05D000177 6.3e-10 68.2 55 54.5
Psat7g035600 Pisum sativum HOM05D000612 ORTHO05D000461 6.3e-10 68.2 133 28.6
Medtr8g097310 Medicago truncatula HOM05D000294 ORTHO05D000177 1.4e-09 67.0 136 31.6
Psat2g046120 Pisum sativum HOM05D000294 ORTHO05D000177 1.8e-09 66.6 135 31.9
Solyc07g049130.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 3.1e-09 65.9 60 48.3
Sopen07g024560 Solanum pennellii HOM05D000294 ORTHO05D000177 3.1e-09 65.9 60 48.3
PGSC0003DMG400038899 Solanum tuberosum HOM05D000294 ORTHO05D000177 3.1e-09 65.9 56 51.8
CAN.G834.8 Capsicum annuum HOM05D000294 ORTHO05D000177 4.1e-09 65.5 135 31.1
Prupe.3G164700 Prunus persica HOM05D000294 ORTHO05D000177 4.1e-09 65.5 51 47.1
Solyc02g032555.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 4.1e-09 65.5 56 50.0
Solyc07g049120.2 Solanum lycopersicum HOM05D000294 ORTHO05D000177 4.1e-09 65.5 60 48.3
Sopen02g010840 Solanum pennellii HOM05D000294 ORTHO05D000177 6.9e-09 64.7 56 50.0
Solyc02g033100.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 1.5e-08 63.5 56 50.0
Sopen02g011530 Solanum pennellii HOM05D000294 ORTHO05D000177 2.0e-08 63.2 56 46.4
MD17G1254800 Malus domestica HOM05D000294 ORTHO05D000177 2.6e-08 62.8 54 53.7
vmacro20636 Vaccinium macrocarpon HOM05D039283 ORTHO05D000177 2.6e-08 62.8 53 47.2
vmacro18520 Vaccinium macrocarpon HOM05D000294 ORTHO05D000177 3.4e-08 62.4 52 50.0
Sopen02g011590 Solanum pennellii HOM05D000294 ORTHO05D000177 5.9e-08 61.6 56 46.4
arahy.Tifrunner.gnm1.ann1.RCY4IA Arachis hypogaea HOM05D000294 ORTHO05D000177 1.0e-07 60.8 63 47.6
Solyc02g036200.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 2.2e-07 59.7 54 44.4
Solyc02g033110.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 5.0e-07 58.5 53 47.2
Solyc02g036230.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 5.0e-07 58.5 58 43.1
Solyc02g033120.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 6.5e-07 58.2 53 47.2
Solyc02g036170.3 Solanum lycopersicum HOM05D000294 ORTHO05D000177 6.5e-07 58.2 54 44.4
FvH4_1g29980 Fragaria vesca HOM05D000294 ORTHO05D000177 8.5e-07 57.8 139 29.5
Solyc02g036140.1 Solanum lycopersicum HOM05D000294 ORTHO05D000177 8.5e-07 57.8 54 44.4
TPR.G9986 Trifolium pratense HOM05D000294 ORTHO05D000177 8.5e-07 57.8 135 31.1
SGA_v2.0_scaffold56G20005 Striga asiatica HOM05D000294 ORTHO05D000177 2.5e-06 56.2 143 28.0
Medtr5g077740 Medicago truncatula HOM05D000294 ORTHO05D000177 9.4e-06 54.3 139 28.8


User provided reference genes

Program Settings