Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15695 Selenicereus undatus HOM05D000331 ORTHO05D382727 3.3e-39 164.5 78 100.0
Hund14077 Selenicereus undatus HOM05D000331 ORTHO05D002018 1.8e-16 89.0 145 40.0
Ah.03g143280 Amaranthus hybridus HOM05D000331 ORTHO05D002018 1.3e-11 72.8 146 34.2
AUR62003686 Chenopodium quinoa HOM05D000331 ORTHO05D002018 2.3e-11 72.0 146 35.6
AUR62017998 Chenopodium quinoa HOM05D000331 ORTHO05D002018 8.6e-11 70.1 146 34.9
AUR62043606 Chenopodium quinoa HOM05D000331 ORTHO05D002018 3.3e-10 68.2 146 34.2
SGA_v2.0_scaffold219G42558 Striga asiatica HOM05D000331 ORTHO05D002018 8.0e-09 63.5 149 28.2
Aqoxy6G00825 Aquilegia oxysepala HOM05D000331 ORTHO05D002018 2.3e-08 62.0 143 30.1
Ah.01g023860 Amaranthus hybridus HOM05D000331 ORTHO05D002018 3.1e-08 61.6 114 32.5
Duzib168G1996 Durio zibethinus HOM05D000331 ORTHO05D002018 5.2e-08 60.8 91 35.2
Nitab4.5_0001773g0030 Nicotiana tabacum HOM05D000331 ORTHO05D002018 5.2e-08 60.8 134 29.1
Lsat_1_v5_gn_5_55501 Lactuca sativa HOM05D000331 ORTHO05D002018 6.8e-08 60.5 107 31.8
Aqoxy7G03286 Aquilegia oxysepala HOM05D000331 ORTHO05D002018 8.9e-08 60.1 140 27.9
Os01g0920400 Oryza sativa ssp. japonica HOM05D000331 ORTHO05D002018 1.2e-07 59.7 145 28.3
Gohir.A03G177700 Gossypium hirsutum HOM05D000331 ORTHO05D002018 1.5e-07 59.3 145 29.7
EL10Ac6g15175 Beta vulgaris HOM05D000331 ORTHO05D002018 2.6e-07 58.5 37 70.3
Lsat_1_v5_gn_8_105921 Lactuca sativa HOM05D005218 ORTHO05D002018 2.6e-07 58.5 106 32.1
Thhalv10022566m.g Eutrema salsugineum HOM05D000331 ORTHO05D002018 3.4e-07 58.2 143 28.0
Gohir.D02G201400 Gossypium hirsutum HOM05D000331 ORTHO05D002018 3.4e-07 58.2 145 29.0
Gorai.005G226100 Gossypium raimondii HOM05D000331 ORTHO05D002018 3.4e-07 58.2 145 29.0
TAR636G1178 Trochodendron aralioides HOM05D000331 ORTHO05D002018 3.4e-07 58.2 139 28.8
TAR376G0912 Trochodendron aralioides HOM05D000331 ORTHO05D002018 4.4e-07 57.8 146 27.4
TAR628G0314 Trochodendron aralioides HOM05D000331 ORTHO05D002018 4.4e-07 57.8 145 28.3
Atru.chr6.1299 Acer truncatum HOM05D000331 ORTHO05D002018 5.8e-07 57.4 145 28.3
Ciclev10027825m.g Citrus clementina HOM05D000331 ORTHO05D002018 5.8e-07 57.4 143 28.7
Lj5C229G23 Lonicera japonica HOM05D000331 ORTHO05D002018 5.8e-07 57.4 146 27.4
Manes.07G041100 Manihot esculenta HOM05D000331 ORTHO05D002018 5.8e-07 57.4 143 27.3
Dinv16009 Davidia involucrata HOM05D000331 ORTHO05D002018 7.5e-07 57.0 145 27.6
Sabra07G0095600 Salix brachista HOM05D000331 ORTHO05D002018 7.5e-07 57.0 146 28.1
Haze_10495 Corylus avellana HOM05D000331 ORTHO05D002018 9.8e-07 56.6 148 28.4
Glyma.13G256100 Glycine max HOM05D000331 ORTHO05D002018 9.8e-07 56.6 146 28.1
Glyma.15G058700 Glycine max HOM05D000331 ORTHO05D002018 9.8e-07 56.6 146 28.1
Hma1.2p1_0435F.1_g152700 Hydrangea macrophylla HOM05D000331 ORTHO05D002018 9.8e-07 56.6 135 28.1
Nitab4.5_0007950g0010 Nicotiana tabacum HOM05D000331 ORTHO05D002018 9.8e-07 56.6 145 26.9
Sopen11g019650 Solanum pennellii HOM05D000331 ORTHO05D002018 9.8e-07 56.6 146 26.0
TPR.G9509 Trifolium pratense HOM05D000331 ORTHO05D002018 9.8e-07 56.6 139 28.1
GSVIVG01012532001 Vitis vinifera HOM05D000331 ORTHO05D002018 9.8e-07 56.6 146 28.8
Nitab4.5_0008268g0020 Nicotiana tabacum HOM05D000331 ORTHO05D002018 1.3e-06 56.2 146 26.0
SHI04933 Sapria himalayana HOM05D000331 ORTHO05D002018 1.3e-06 56.2 145 28.3
Aa31sc21G40 Aethionema arabicum HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 28.0
AL7G17850 Arabidopsis lyrata HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 28.0
arahy.Tifrunner.gnm1.ann1.JYI6HY Arachis hypogaea HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 26.6
CARHR241750 Cardamine hirsuta HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 28.0
ECA240G3290 Erigeron canadensis HOM05D000331 ORTHO05D002018 1.7e-06 55.8 146 26.7
Sp7g31380 Schrenkiella parvula HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 28.0
Sed0014896 Sechium edule HOM05D000331 ORTHO05D002018 1.7e-06 55.8 146 27.4
THA.LOC104804420 Tarenaya hassleriana HOM05D000331 ORTHO05D002018 1.7e-06 55.8 143 28.0
TWI14G0887 Tripterygium wilfordii HOM05D000331 ORTHO05D002018 1.7e-06 55.8 146 28.8
arahy.Tifrunner.gnm1.ann1.67PN3V Arachis hypogaea HOM05D000331 ORTHO05D002018 2.2e-06 55.5 143 25.9
Carub.0003s2837 Capsella rubella HOM05D000331 ORTHO05D002018 2.2e-06 55.5 145 27.6
CDE04G2044 Ceratophyllum demersum HOM05D000331 ORTHO05D002018 2.2e-06 55.5 135 28.1
Potri.017G041800 Populus trichocarpa HOM05D000331 ORTHO05D002018 2.2e-06 55.5 146 28.1
VMungo0251G3578 Vigna mungo HOM05D000331 ORTHO05D002018 2.2e-06 55.5 139 28.1
Duzib052G0965 Durio zibethinus HOM05D000331 ORTHO05D002018 2.9e-06 55.1 143 27.3
Migut.B00540 Erythranthe guttata HOM05D000331 ORTHO05D002018 2.9e-06 55.1 146 28.1
MBI16_g06009_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 2.9e-06 55.1 142 28.9
Medtr4g093750 Medicago truncatula HOM05D000331 ORTHO05D002018 2.9e-06 55.1 142 28.2
Peaxi162Scf00152g00829 Petunia axillaris HOM05D000331 ORTHO05D002018 2.9e-06 55.1 146 26.7
Rhsim05G0101000 Rhododendron simsii HOM05D000331 ORTHO05D002018 2.9e-06 55.1 139 26.6
Thecc.02G127800 Theobroma cacao HOM05D000331 ORTHO05D002018 2.9e-06 55.1 143 27.3
HPP92_007001 Vanilla planifolia HOM05D000331 ORTHO05D002018 2.9e-06 55.1 137 27.0
Cc02_g20790 Coffea canephora HOM05D000331 ORTHO05D002018 3.7e-06 54.7 146 27.4
Eucgr.I02611 Eucalyptus grandis HOM05D000331 ORTHO05D002018 3.7e-06 54.7 146 26.7
Gohir.A13G050300 Gossypium hirsutum HOM05D000331 ORTHO05D002018 3.7e-06 54.7 145 27.6
Gohir.D13G049100 Gossypium hirsutum HOM05D000331 ORTHO05D002018 3.7e-06 54.7 145 27.6
Gorai.013G054900 Gossypium raimondii HOM05D000331 ORTHO05D002018 3.7e-06 54.7 145 27.6
HanXRQChr16g0514511 Helianthus annuus HOM05D000331 ORTHO05D002018 3.7e-06 54.7 146 25.3
Medtr2g009690 Medicago truncatula HOM05D000331 ORTHO05D002018 3.7e-06 54.7 137 27.7
BcaNung02188 Brassica carinata HOM05D000331 ORTHO05D002018 4.9e-06 54.3 133 27.8
Ca_00168_v3 Cicer arietinum L. HOM05D000331 ORTHO05D002018 4.9e-06 54.3 137 27.0
Duzib248G0980 Durio zibethinus HOM05D000331 ORTHO05D002018 4.9e-06 54.3 143 28.0
Thhalv10024438m.g Eutrema salsugineum HOM05D000331 ORTHO05D002018 4.9e-06 54.3 143 26.6
Lj9C347G7 Lonicera japonica HOM05D000331 ORTHO05D002018 4.9e-06 54.3 137 27.7
MBI16_g30316_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 4.9e-06 54.3 142 28.2
Nitab4.5_0000088g0030 Nicotiana tabacum HOM05D000331 ORTHO05D002018 4.9e-06 54.3 146 25.3
Psat1g213760 Pisum sativum HOM05D000331 ORTHO05D002018 4.9e-06 54.3 137 27.0
SalBow6G0885 Salvia bowleyana HOM05D000331 ORTHO05D002018 4.9e-06 54.3 146 27.4
TPR.G2891 Trifolium pratense HOM05D000331 ORTHO05D002018 4.9e-06 54.3 145 27.6
VMungo0540G2460 Vigna mungo HOM05D000331 ORTHO05D002018 4.9e-06 54.3 146 27.4
Carub.0007s0678 Capsella rubella HOM05D000331 ORTHO05D002018 6.4e-06 53.9 143 27.3
COL.COLO4_32409 Corchorus olitorius HOM05D000331 ORTHO05D002018 6.4e-06 53.9 145 26.9
CsaV3_4G014740 Cucumis sativus L. HOM05D000331 ORTHO05D002018 6.4e-06 53.9 145 27.6
Duzib132G0773 Durio zibethinus HOM05D000331 ORTHO05D002018 6.4e-06 53.9 139 27.3
Lj4g0011564 Lotus japonicus HOM05D000331 ORTHO05D002018 6.4e-06 53.9 139 26.6
MBI18_g35612_MAGBIO Magnolia biondii HOM05D035445 ORTHO05D029980 6.4e-06 53.9 70 40.0
Psat2g165560 Pisum sativum HOM05D000331 ORTHO05D002018 6.4e-06 53.9 145 27.6
Hund06471 Selenicereus undatus HOM05D000331 ORTHO05D002018 6.4e-06 53.9 143 26.6
THA.LOC104820169 Tarenaya hassleriana HOM05D000331 ORTHO05D002018 6.4e-06 53.9 143 26.6
Cfa004837 Carpinus fangiana HOM05D000331 ORTHO05D002018 8.3e-06 53.5 146 26.7
Dinv13565 Davidia involucrata HOM05D000331 ORTHO05D002018 8.3e-06 53.5 147 28.6
ECA234G3483 Erigeron canadensis HOM05D000331 ORTHO05D002018 8.3e-06 53.5 139 25.9
Migut.N01101 Erythranthe guttata HOM05D000331 ORTHO05D002018 8.3e-06 53.5 143 25.9
HanXRQChr03g0073971 Helianthus annuus HOM05D000331 ORTHO05D002018 8.3e-06 53.5 139 25.9
Sabra17G0028500 Salix brachista HOM05D000331 ORTHO05D002018 8.3e-06 53.5 38 63.2
Sed0026197 Sechium edule HOM05D000331 ORTHO05D002018 8.3e-06 53.5 146 26.7
Sc07g0000340 Simmondsia chinensis HOM05D000331 ORTHO05D002018 8.3e-06 53.5 132 28.8


User provided reference genes

Program Settings