Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 5.6e-98 360.9 181 100.0
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.5e-45 186.0 182 57.1
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.5e-45 186.0 182 56.6
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 5.9e-39 164.9 176 54.5
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.8e-36 156.0 180 50.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 1.4e-35 153.7 175 49.7
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 1.8e-35 153.3 180 50.0
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 2.6e-34 149.4 174 51.1
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.3e-33 147.1 174 50.6
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 4.9e-33 145.2 181 47.0
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 8.3e-33 144.4 181 44.8
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 8.3e-33 144.4 190 43.7
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 1.1e-32 144.1 180 48.3
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.9e-32 143.3 184 46.7
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 4.1e-32 142.1 190 46.3
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 7.0e-32 141.4 178 46.1
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 3.5e-31 139.0 177 47.5
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 3.5e-31 139.0 180 45.0
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 1.0e-30 137.5 192 45.3
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.3e-30 137.1 182 46.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 1.3e-30 137.1 178 45.5
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 3.9e-30 135.6 196 45.9
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 3.9e-30 135.6 179 44.1
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 6.6e-30 134.8 200 44.0
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 8.6e-30 134.4 176 47.7
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.1e-29 134.0 177 46.9
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.5e-29 133.7 177 48.6
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.5e-29 133.7 176 48.3
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.9e-29 133.3 189 44.4
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.9e-29 133.3 173 45.1
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 3.3e-29 132.5 192 41.7
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 4.3e-29 132.1 180 44.4
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 2.1e-28 129.8 194 41.8
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 2.1e-28 129.8 176 44.3
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.1e-28 129.8 172 45.9
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.6e-28 129.0 187 41.2
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 3.6e-28 129.0 175 46.3
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 3.6e-28 129.0 181 42.5
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 4.7e-28 128.6 189 41.8
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 4.7e-28 128.6 190 45.3
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 8.0e-28 127.9 173 41.6
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 1.1e-27 127.5 195 40.5
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 1.1e-27 127.5 182 42.3
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 1.4e-27 127.1 181 44.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.4e-27 127.1 179 45.8
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 1.8e-27 126.7 178 42.1
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.3e-27 126.3 180 42.2
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 5.2e-27 125.2 191 39.8
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 8.9e-27 124.4 194 38.7
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.2e-26 124.0 178 45.5
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 5.8e-26 121.7 173 43.4
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 5.8e-26 121.7 172 44.2
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 7.5e-26 121.3 172 43.6
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.3e-25 120.6 199 40.2
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 1.7e-25 120.2 173 43.4
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 2.2e-25 119.8 194 38.7
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.7e-25 119.0 184 41.3
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 3.7e-25 119.0 177 41.8
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 4.9e-25 118.6 166 42.8
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 8.3e-25 117.9 176 40.3
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 1.9e-24 116.7 190 40.5
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.4e-24 116.3 180 41.1
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 7.0e-24 114.8 173 39.9
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 9.2e-24 114.4 173 39.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 1.2e-23 114.0 175 41.1
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.6e-23 113.6 176 40.9
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.6e-23 113.6 176 40.9
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.6e-23 113.6 186 40.9
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 1.6e-23 113.6 175 42.9
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.1e-23 113.2 176 41.5
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.1e-23 113.2 188 38.3
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 2.7e-23 112.8 187 42.8
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 3.5e-23 112.5 131 54.2
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 3.5e-23 112.5 177 40.7
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 3.5e-23 112.5 177 40.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.5e-23 112.5 175 41.7
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 4.6e-23 112.1 191 38.7
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 7.8e-23 111.3 183 38.8
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.0e-22 110.9 170 40.6
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.7e-22 110.2 183 38.8
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.7e-22 110.2 170 37.6
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 3.0e-22 109.4 183 38.3
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.9e-22 109.0 180 42.2
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 6.6e-22 108.2 173 39.9
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.6e-22 108.2 178 36.5
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 6.6e-22 108.2 178 38.2
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.6e-22 107.8 179 40.2
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 8.6e-22 107.8 177 37.9
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.1e-21 107.5 180 42.2
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 1.1e-21 107.5 175 40.0
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.5e-21 107.1 180 42.2
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 1.9e-21 106.7 176 38.6
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.5e-21 106.3 177 38.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.3e-21 105.9 185 40.5
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 5.6e-21 105.1 190 37.9
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.6e-20 103.6 178 41.0
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 3.6e-20 102.4 213 35.7
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 8.1e-20 101.3 172 40.1
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.4e-19 100.5 171 38.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 3.1e-19 99.4 170 37.1
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 4.0e-19 99.0 177 40.7
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 6.8e-19 98.2 168 38.1
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.0e-18 96.7 177 34.5
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 3.4e-18 95.9 185 37.3
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 7.5e-18 94.7 202 35.6
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 7.5e-18 94.7 180 35.0
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 9.9e-18 94.4 182 35.7
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 1.3e-17 94.0 174 36.8
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.3e-17 94.0 178 36.5
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.4e-16 90.5 173 35.3
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 1.4e-16 90.5 134 44.0
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.9e-16 90.1 178 34.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 2.4e-16 89.7 177 33.3
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 2.4e-16 89.7 171 34.5
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 5.4e-16 88.6 179 34.6
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.2e-15 87.4 179 34.6
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 1.6e-15 87.0 176 33.5
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 7.8e-15 84.7 153 37.9
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 7.8e-15 84.7 216 33.8
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.7e-14 83.6 84 53.6
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.1e-14 82.0 172 36.0
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.6e-12 77.0 157 34.4
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 2.8e-12 76.3 59 59.3
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 8.9e-11 71.2 148 35.1
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 1.9e-08 63.5 168 31.5
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 7.1e-08 61.6 121 38.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 4.6e-07 58.9 51 56.9
Nn8g38687 Nelumbo nucifera HOM05D046178 ORTHO05D006426 4.6e-07 58.9 59 50.8
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 6.0e-07 58.5 49 49.0
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 1.3e-06 57.4 76 48.7


User provided reference genes

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