Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15217 Selenicereus undatus HOM05D000729 ORTHO05D001063 8.7e-75 283.5 138 100.0
BolSC45t60895H Brassica oleracea HOM05D000729 ORTHO05D001063 7.5e-10 67.8 97 44.3
Nitab4.5_0000174g0030 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.3e-09 67.0 172 34.9
CSS0011532 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 6.4e-09 64.7 60 61.7
Sed0019191 Sechium edule HOM05D000729 ORTHO05D001063 1.1e-08 63.9 144 36.1
CSS0024971 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 1.9e-08 63.2 79 48.1
Migut.D01404 Erythranthe guttata HOM05D000729 ORTHO05D001063 2.4e-08 62.8 60 60.0
Sed0001647 Sechium edule HOM05D000729 ORTHO05D001063 2.4e-08 62.8 133 36.8
Nitab4.5_0012234g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 9.2e-08 60.8 79 49.4
arahy.Tifrunner.gnm1.ann1.6Q4XIG Arachis hypogaea HOM05D000729 ORTHO05D001063 1.6e-07 60.1 79 46.8
HanXRQChr04g0127411 Helianthus annuus HOM05D000729 ORTHO05D001063 2.1e-07 59.7 65 52.3
Nitab4.5_0007104g0020 Nicotiana tabacum HOM05D000729 ORTHO05D001063 2.7e-07 59.3 95 40.0
Ah.08g221560 Amaranthus hybridus HOM05D000729 ORTHO05D001063 3.5e-07 58.9 79 48.1
Phvul.004G098800 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 3.5e-07 58.9 34 76.5
Ah.09g227350 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
Ah.10g027240 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
Ah.10g027280 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
Ah.10g027410 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
Ah.10g027680 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
Ah.10g027720 Amaranthus hybridus HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 46.8
EL10Ac5g11886 Beta vulgaris HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 48.1
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 48.1
Gohir.D01G101826 Gossypium hirsutum HOM05D000729 ORTHO05D001063 6.0e-07 58.2 104 37.5
Oeu028762.1 Olea europaea HOM05D000729 ORTHO05D001063 6.0e-07 58.2 79 48.1
BNapus_Darmor_BZH_scaffold_147p00010 Brassica napus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
C04p22490 Brassica napus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
C06p23140 Brassica napus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolC2t10586H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC29t60517H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC29t60560H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC35t60718H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC45t60896H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC45t60922H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC47t61056H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC49t61130H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC49t61156H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BolSC49t61215H Brassica oleracea HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BraSC103t45493Z Brassica rapa HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BraSC138t45543Z Brassica rapa HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BraSC58t46449Z Brassica rapa HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
BraSC59t46561Z Brassica rapa HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
DCAR_001523 Daucus carota HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
DCAR_032530 Daucus carota HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
DCAR_032546 Daucus carota HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Migut.D01499 Erythranthe guttata HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Migut.F01470 Erythranthe guttata HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Eucgr.I01854 Eucalyptus grandis HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Thhalv10011731m.g Eutrema salsugineum HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Hma1.2p1_0052F.1_g030753 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Hma1.2p1_0052F.1_g030756 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Hma1.2p1_1244F.1_g270050 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Hma1.2p1_1244F.1_g270060 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Lj4g0028091 Lotus japonicus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
LjContig00489g0003974 Lotus japonicus HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
PGR111G0104 Punica granatum HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
PGR111G0125 Punica granatum HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
SalBow1G3941 Salvia bowleyana HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
SalBow1G4562 Salvia bowleyana HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
SalBow1G6647 Salvia bowleyana HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Solyc00g500299.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
Solyc10g061887.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 7.8e-07 57.8 79 46.8
AL1G51260 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
AL2G21870 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
AL7G44080 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
AL9U12020 Arabidopsis lyrata HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
Lj1g0004410 Lotus japonicus HOM05D000729 ORTHO05D001063 1.0e-06 57.4 37 73.0
Medtr1g088510 Medicago truncatula HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 1.0e-06 57.4 79 45.6
ATCG00890 Arabidopsis thaliana HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 44.3
ATCG01250 Arabidopsis thaliana HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 44.3
CARHR282330 Cardamine hirsuta HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 44.3
CARHR282530 Cardamine hirsuta HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 44.3
Gohir.A08G078001 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 45.6
Gohir.D13G096725 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.3e-06 57.0 79 45.6
Lalb_Chr25g0281891 Lupinus albus HOM05D000729 ORTHO05D001063 1.3e-06 57.0 37 70.3
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr02g0059631 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr08g0230001 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr09g0249681 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr10g0317951 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr13g0386751 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr13g0416581 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 1.7e-06 56.6 79 44.3
arahy.Tifrunner.gnm1.ann1.VX11DM Arachis hypogaea HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
HanXRQChr00c0496g0575221 Helianthus annuus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 113 36.3
Lsat_1_v5_gn_9_18660 Lactuca sativa HOM05D000729 ORTHO05D001063 2.3e-06 56.2 60 55.0
Hund03965 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund07988 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund08790 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund10279 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund22780 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund27635 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund27858 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund27885 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund27921 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund27951 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund28172 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund28540 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund28970 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund29048 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund29105 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund29118 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund29149 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund29155 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Hund31224 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 46.8
Solyc12g033020.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 2.3e-06 56.2 79 45.6
C06p21330 Brassica napus HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
CSS0007099 Camellia sinensis var. sinensis HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
CAN.G798.3 Capsicum annuum HOM05D000407 ORTHO05D000558 3.0e-06 55.8 31 83.9
HanXRQChr00c0747g0577151 Helianthus annuus HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
HanXRQChr01g0008351 Helianthus annuus HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
HanXRQChr16g0530791 Helianthus annuus HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
Hma1.2p1_0535F.1_g173850 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
Nitab4.5_0003644g0110 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
Phvul.001G209700 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 3.0e-06 55.8 104 38.5
Solyc09g050070.1 Solanum lycopersicum HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
PGSC0003DMG400015298 Solanum tuberosum HOM05D000729 ORTHO05D001063 3.0e-06 55.8 31 83.9
CsaV3_UNG208980 Cucumis sativus L. HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
Gohir.A09G093100 Gossypium hirsutum HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
Medtr0002s0310 Medicago truncatula HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 44.3
Os04g0473025 Oryza sativa ssp. japonica HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 44.3
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
Potri.013G139112 Populus trichocarpa HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
RcHm_v2.0_Chr5g0051091 Rosa chinensis HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
RcHm_v2.0_CPg0501741 Rosa chinensis HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
RcHm_v2.0_CPg0502671 Rosa chinensis HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
SabraPtG0004800 Salix brachista HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
Sed0008128 Sechium edule HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
Sc03g0010040 Simmondsia chinensis HOM05D000729 ORTHO05D001063 3.9e-06 55.5 79 45.6
EL10As12g24040 Beta vulgaris HOM05D000729 ORTHO05D001063 5.1e-06 55.1 183 30.6
BolC7t41702H Brassica oleracea HOM05D000729 ORTHO05D001063 5.1e-06 55.1 79 45.6
Migut.E00944 Erythranthe guttata HOM05D000729 ORTHO05D001063 5.1e-06 55.1 31 80.6
Oeu012825.1 Olea europaea HOM05D000729 ORTHO05D001063 5.1e-06 55.1 79 45.6
Phvul.002G090555 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 5.1e-06 55.1 79 44.3
Phvul.003G089802 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 5.1e-06 55.1 79 44.3
Phvul.009G090272 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 5.1e-06 55.1 79 44.3
vmacro22398 Vaccinium macrocarpon HOM05D000729 ORTHO05D001063 5.1e-06 55.1 31 83.9
vmacro22423 Vaccinium macrocarpon HOM05D000729 ORTHO05D001063 5.1e-06 55.1 31 83.9
HanXRQChr05g0150471 Helianthus annuus HOM05D000729 ORTHO05D001063 6.6e-06 54.7 102 39.2
Nitab4.5_0004920g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 6.6e-06 54.7 79 45.6
RcHm_v2.0_Chr2g0118391 Rosa chinensis HOM05D000729 ORTHO05D001063 6.6e-06 54.7 79 45.6
Aqoxy4G02024 Aquilegia oxysepala HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Cpa.g.sc2.67 Carica papaya HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 43.0
Nn029s41588 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Nn031s41603 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Nn206s45069 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Nn219s45284 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Nn233s45561 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Nn269s46005 Nelumbo nucifera HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
PSO357G0279 Papaver somniferum HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
PSO548G0058 Papaver somniferum HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
PSO548G0065 Papaver somniferum HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3
Hund03963 Selenicereus undatus HOM05D000729 ORTHO05D001063 8.6e-06 54.3 31 83.9
TAR365G1092 Trochodendron aralioides HOM05D000729 ORTHO05D001063 8.6e-06 54.3 79 44.3


User provided reference genes

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