Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 6.2e-180 634.0 324 100.0
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.1e-136 490.3 324 76.2
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 4.3e-133 478.4 321 75.7
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 8.2e-132 474.2 321 75.7
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 6.1e-127 458.0 331 72.2
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 3.0e-126 455.7 326 72.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.9e-126 455.3 330 72.4
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 6.7e-126 454.5 327 71.3
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.5e-125 453.4 326 71.2
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.3e-125 452.2 323 70.9
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.7e-125 451.4 336 70.2
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.2e-124 449.5 329 70.5
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.2e-124 449.5 331 70.4
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 2.2e-124 449.5 331 70.4
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.2e-124 449.5 333 69.7
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.8e-124 448.4 341 69.5
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.1e-123 447.2 340 68.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.1e-123 445.3 321 72.9
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 7.0e-123 444.5 337 69.4
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 9.1e-123 444.1 326 69.9
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 9.1e-123 444.1 336 69.0
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-122 443.7 337 69.4
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.0e-122 443.0 340 68.5
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 2.6e-122 442.6 318 70.8
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.6e-122 442.6 335 69.3
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 3.5e-122 442.2 331 68.3
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 3.5e-122 442.2 339 67.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.9e-122 441.4 252 84.9
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 5.9e-122 441.4 323 68.7
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 1.0e-121 440.7 333 68.5
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-121 440.7 333 69.1
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-121 440.7 336 68.5
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-121 440.3 335 68.7
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.7e-121 439.9 325 70.2
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 2.9e-121 439.1 300 75.0
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 3.8e-121 438.7 328 68.9
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 8.5e-121 437.6 343 68.8
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.1e-120 437.2 328 68.3
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.4e-120 436.8 333 67.0
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 2.5e-120 436.0 337 67.7
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.2e-120 435.6 333 67.9
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 4.2e-120 435.3 338 67.8
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 4.2e-120 435.3 336 67.6
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 9.4e-120 434.1 270 78.9
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 9.4e-120 434.1 321 67.9
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.6e-119 433.3 335 68.4
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.1e-119 433.0 252 82.9
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.6e-119 432.2 337 67.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.6e-119 432.2 324 68.8
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 8.0e-119 431.0 325 68.3
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-118 430.3 342 67.5
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.4e-118 430.3 325 67.4
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 8.8e-118 427.6 326 68.7
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 8.8e-118 427.6 333 67.6
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.1e-117 427.2 267 77.9
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.1e-117 427.2 267 77.9
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.0e-117 426.4 331 68.6
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 3.3e-117 425.6 332 66.9
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.3e-117 425.6 337 66.5
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 3.3e-117 425.6 328 66.8
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 4.4e-117 425.2 381 60.9
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.3e-116 423.7 321 68.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.2e-116 422.9 334 66.2
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 3.7e-116 422.2 316 69.0
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 4.8e-116 421.8 338 66.3
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 8.2e-116 421.0 327 66.4
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.1e-115 418.7 346 63.3
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 7.0e-115 417.9 345 65.2
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.6e-114 416.8 310 69.0
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 2.6e-114 416.0 338 65.7
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 3.5e-114 415.6 265 77.0
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 4.5e-114 415.2 328 67.4
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 7.7e-114 414.5 347 64.0
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 7.7e-114 414.5 324 66.0
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.9e-113 412.5 319 68.3
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 3.8e-113 412.1 250 79.6
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 1.1e-112 410.6 263 73.8
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 9.4e-112 407.5 263 74.9
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 9.4e-112 407.5 317 66.2
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.2e-111 407.1 318 68.2
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.2e-111 407.1 325 65.8
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 2.1e-111 406.4 252 77.8
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.3e-110 402.9 322 65.2
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 6.8e-110 401.4 270 73.0
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 3.7e-108 395.6 330 63.6
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 3.7e-108 395.6 328 64.3
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 4.8e-108 395.2 331 64.0
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.1e-107 394.0 329 65.3
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.1e-107 394.0 329 65.3
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.8e-107 393.3 328 64.3
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.4e-107 392.9 330 64.5
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.4e-107 392.9 253 74.7
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 4.1e-107 392.1 294 71.1
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.3e-105 387.1 405 53.3
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.7e-105 386.7 332 63.0
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 3.8e-105 385.6 332 62.3
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 6.5e-105 384.8 297 65.0
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.5e-104 383.6 319 63.0
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 7.2e-104 381.3 272 71.0
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 9.4e-104 380.9 275 70.5
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 6.1e-103 378.3 250 72.0
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.0e-101 373.2 325 60.3
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 3.4e-101 372.5 298 65.1
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 4.4e-101 372.1 298 65.1
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 2.4e-99 366.3 300 64.3
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 5.4e-99 365.2 336 58.3
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 6.8e-94 348.2 258 65.1
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.7e-93 345.1 346 57.5
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 5.6e-88 328.6 323 55.4
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 2.1e-87 326.6 269 59.5
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 3.0e-81 306.2 333 54.7
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.5e-77 293.9 228 66.2
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 9.8e-77 291.2 309 54.7
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.5e-66 256.1 204 66.7
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 7.3e-64 248.4 150 81.3
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.4e-61 239.6 209 64.1
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 3.4e-61 239.6 252 49.6
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 7.6e-61 238.4 256 48.0
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 8.4e-60 235.0 217 59.0
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 9.3e-59 231.5 209 60.8
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 7.3e-56 221.9 236 48.3
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 3.1e-54 216.5 252 43.7
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.2e-52 210.3 203 56.2
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.9e-52 209.9 127 82.7
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.9e-52 209.9 127 82.7
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 4.9e-52 209.1 125 82.4
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.6e-50 204.1 220 48.2
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.1e-50 203.8 109 88.1
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 3.9e-49 199.5 170 62.4
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 8.4e-44 181.8 236 40.7
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 8.7e-41 171.8 248 39.1
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.0e-33 148.3 91 83.5
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.5e-32 143.7 100 69.0
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 6.2e-31 139.0 124 62.1
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.7e-28 131.0 104 67.3
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.4e-27 127.9 215 34.4
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.9e-27 127.5 79 77.2
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-25 120.9 65 87.7
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 6.7e-25 119.0 65 86.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 1.5e-24 117.9 65 86.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 9.0e-22 108.6 87 65.5
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 9.0e-22 108.6 87 65.5
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 9.0e-22 108.6 87 65.5
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.2e-18 98.2 54 81.5
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 7.9e-18 95.5 96 51.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-17 94.4 80 63.8
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 3.0e-17 93.6 71 64.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 4.3e-16 89.7 51 80.4
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.8e-15 87.0 46 82.6
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 9.1e-14 82.0 46 80.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 6.1e-10 69.3 46 69.6
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.9e-10 68.9 161 35.4


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