Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.3e-185 652.9 322 100.0
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.4e-62 244.2 124 94.4
Hund14742 Selenicereus undatus HOM05D037983 ORTHO05D381904 2.4e-22 110.5 77 74.0
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 4.3e-16 89.7 103 51.5
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.4e-16 89.0 51 80.4
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 7.4e-16 89.0 51 80.4
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 7.4e-16 89.0 51 78.4
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.6e-15 87.8 67 64.2
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.6e-15 87.8 51 78.4
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 2.1e-15 87.4 51 78.4
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 2.1e-15 87.4 51 76.5
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 2.1e-15 87.4 51 78.4
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 2.8e-15 87.0 51 76.5
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.7e-15 86.7 51 76.5
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 8.1e-15 85.5 51 76.5
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 8.1e-15 85.5 51 76.5
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 8.1e-15 85.5 70 60.0
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.1e-14 85.1 56 69.6
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 1.1e-14 85.1 51 74.5
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.4e-14 84.7 51 74.5
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.4e-14 84.7 51 74.5
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 1.4e-14 84.7 56 67.9
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 1.4e-14 84.7 51 74.5
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 1.8e-14 84.3 57 66.7
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 1.8e-14 84.3 67 59.7
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 1.8e-14 84.3 51 74.5
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 2.4e-14 84.0 51 72.5
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 2.4e-14 84.0 51 72.5
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 3.1e-14 83.6 51 72.5
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 3.1e-14 83.6 51 72.5
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 4.0e-14 83.2 51 72.5
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 4.0e-14 83.2 51 72.5
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 4.0e-14 83.2 51 72.5
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 5.3e-14 82.8 51 72.5
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 6.9e-14 82.4 51 72.5
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 9.0e-14 82.0 57 64.9
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 9.0e-14 82.0 51 70.6
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 72.5
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 70.6
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 70.6
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 70.6
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 70.6
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 1.2e-13 81.6 51 70.6
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 1.5e-13 81.3 69 56.5
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 1.5e-13 81.3 51 70.6
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.5e-13 81.3 51 70.6
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 1.5e-13 81.3 51 70.6
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 1.5e-13 81.3 51 70.6
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.5e-13 81.3 51 70.6
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.5e-13 81.3 51 68.6
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 2.0e-13 80.9 51 68.6
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 2.0e-13 80.9 105 46.7
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 2.0e-13 80.9 51 70.6
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.0e-13 80.9 51 70.6
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.6e-13 80.5 50 72.0
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 2.6e-13 80.5 51 68.6
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 2.6e-13 80.5 51 68.6
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 3.4e-13 80.1 51 68.6
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 4.5e-13 79.7 51 66.7
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 4.5e-13 79.7 51 68.6
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 5.8e-13 79.3 50 68.0
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.3e-12 78.2 64 57.8
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 1.7e-12 77.8 50 66.0
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 3.8e-12 76.6 86 47.7
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.8e-12 76.6 51 64.7
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.8e-12 76.6 51 64.7
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 6.5e-12 75.9 55 61.8
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.4e-11 74.7 51 62.7
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 3.2e-11 73.6 51 56.9
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 4.2e-11 73.2 51 58.8
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 5.5e-11 72.8 51 62.7
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.2e-10 71.6 56 57.1
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.5e-10 70.1 51 64.7
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 8.7e-09 65.5 85 41.2
Hund14737 Selenicereus undatus HOM05D037983 ORTHO05D383371 3.1e-06 57.0 37 81.1


User provided reference genes

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