Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 0.0e+00 1596.6 828 100.0
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 2.7e-296 1021.9 835 64.4
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 3.1e-292 1008.4 830 64.0
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.1e-281 973.4 739 68.6
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 1.1e-281 973.4 739 68.5
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 2.5e-270 935.6 832 59.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 5.3e-268 927.9 832 58.7
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.2e-267 926.8 832 59.1
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 5.5e-265 917.9 831 59.7
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.1e-260 902.1 834 58.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.6e-259 899.0 828 58.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 3.4e-259 898.7 832 58.7
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.5e-259 898.3 833 57.4
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.3e-258 896.7 834 58.0
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 1.7e-258 896.3 831 58.1
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 5.0e-258 894.8 832 58.2
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.6e-256 889.8 836 58.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 7.9e-256 887.5 830 57.6
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.0e-255 887.1 830 58.1
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.1e-254 883.6 811 58.6
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 1.4e-252 876.7 832 57.8
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 9.1e-252 874.0 821 59.0
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.6e-251 872.5 832 57.5
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 7.7e-251 870.9 836 56.3
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.7e-250 869.8 821 56.4
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.1e-248 862.8 817 56.8
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 8.0e-248 860.9 833 56.3
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.4e-247 860.1 833 55.6
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 6.7e-247 857.8 831 54.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.7e-245 853.2 833 54.7
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 3.5e-243 845.5 835 56.9
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.9e-243 844.7 798 58.4
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 2.9e-242 842.4 833 54.1
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 5.0e-242 841.6 832 53.7
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 6.5e-242 841.3 796 56.5
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 8.5e-242 840.9 822 56.9
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.5e-241 840.1 824 56.6
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 3.2e-241 839.0 833 54.7
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 3.2e-241 839.0 832 53.4
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 9.4e-241 837.4 834 55.0
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 6.1e-240 834.7 798 55.8
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 6.7e-239 831.2 814 54.7
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.0e-238 829.7 814 54.7
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 1.8e-236 823.2 807 55.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 5.3e-236 821.6 832 52.6
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 2.2e-234 816.2 831 54.0
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 2.5e-233 812.8 831 54.3
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 4.2e-233 812.0 830 53.5
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 1.2e-232 810.4 799 54.4
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.7e-232 809.3 833 53.4
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 3.0e-231 805.8 812 54.6
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 8.8e-231 804.3 798 54.5
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 3.1e-228 795.8 828 52.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.0e-227 793.1 832 52.3
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 6.6e-226 788.1 812 53.9
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 8.0e-224 781.2 815 53.9
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.0e-223 780.8 746 55.4
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 2.2e-221 773.1 834 52.4
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 2.8e-221 772.7 834 50.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.8e-221 772.7 834 52.3
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.9e-221 771.9 828 51.6
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.1e-220 770.8 836 52.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 1.2e-219 767.3 834 50.6
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 2.0e-219 766.5 827 50.9
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 9.5e-217 757.7 811 51.8
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 1.6e-216 756.9 840 50.2
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 3.6e-216 755.7 790 53.3
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 3.1e-215 752.7 790 53.2
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 5.2e-215 751.9 837 52.1
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 5.2e-215 751.9 803 52.1
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.0e-214 750.0 829 51.9
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 8.3e-213 744.6 792 52.8
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 1.4e-212 743.8 812 51.6
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 1.4e-212 743.8 805 51.9
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.9e-212 743.4 828 51.2
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 9.2e-212 741.1 796 51.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 6.0e-211 738.4 844 50.8
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 1.0e-210 737.6 831 49.3
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 1.7e-210 736.9 803 50.8
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 3.0e-210 736.1 764 52.7
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 8.6e-210 734.6 810 51.2
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 8.6e-210 734.6 830 49.8
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 4.0e-207 725.7 822 50.0
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.1e-204 717.6 835 49.7
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 9.5e-201 704.5 792 50.8
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.6e-200 703.7 609 60.9
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 8.4e-189 664.8 823 46.3
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 1.1e-188 664.5 798 48.5
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 3.6e-184 649.4 830 44.9
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 4.8e-184 649.0 659 54.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 9.6e-177 624.8 616 56.0
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.5e-174 615.9 611 54.8
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 8.1e-168 595.1 830 42.4
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 3.3e-161 573.2 743 47.2
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 3.8e-157 559.7 791 41.8
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 8.8e-146 521.9 557 52.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.8e-138 497.7 422 60.9
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.0e-134 484.2 562 49.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.5e-132 478.0 625 43.4
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.8e-128 463.0 487 52.8
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.5e-118 430.3 347 63.4
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 3.5e-118 430.3 787 39.3
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 4.1e-111 406.8 519 45.7
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.0e-101 373.2 314 62.4
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.0e-89 334.7 912 28.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.4e-89 333.6 864 30.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 8.6e-85 319.3 309 56.0
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 8.1e-83 312.8 276 59.1
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.8e-82 309.7 489 44.8
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.6e-78 298.5 224 69.2
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 4.9e-72 276.9 187 71.1
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.1e-66 259.2 828 28.0
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 6.0e-62 243.4 272 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.5e-52 212.2 543 29.5
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 1.3e-51 209.1 364 38.2
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.5e-44 184.9 224 49.1
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.4e-39 169.1 591 28.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 5.1e-21 107.5 150 46.0
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 2.6e-17 95.1 71 60.6
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 1.9e-15 89.0 638 22.1


User provided reference genes

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