Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 4.5e-163 577.8 277 100.0
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 1.8e-111 406.4 260 77.7
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 6.8e-111 404.4 251 77.3
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 2.6e-110 402.5 250 76.4
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 7.5e-110 401.0 251 78.9
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 2.2e-109 399.4 267 74.5
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 6.4e-109 397.9 251 77.3
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 1.1e-108 397.1 251 76.1
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 5.4e-108 394.8 249 75.5
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 1.2e-107 393.7 251 76.9
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 2.7e-107 392.5 251 76.5
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 7.8e-107 391.0 249 75.9
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 1.0e-106 390.6 249 75.5
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 1.0e-106 390.6 251 75.7
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 1.0e-106 390.6 266 73.7
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 1.3e-106 390.2 251 73.7
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 3.0e-106 389.0 251 74.1
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 5.1e-106 388.3 250 75.2
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 6.6e-106 387.9 251 74.5
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 1.1e-105 387.1 251 73.7
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 1.5e-105 386.7 251 73.7
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 1.9e-105 386.3 267 69.7
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 1.9e-105 386.3 252 73.0
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 2.5e-105 386.0 251 74.5
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 5.6e-105 384.8 255 72.2
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 7.3e-105 384.4 251 72.9
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 9.5e-105 384.0 252 73.4
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 9.5e-105 384.0 246 78.5
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 9.5e-105 384.0 251 72.9
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 9.5e-105 384.0 250 74.8
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 1.2e-104 383.6 251 72.9
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 1.6e-104 383.3 252 73.0
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 2.8e-104 382.5 252 73.0
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 3.6e-104 382.1 251 71.3
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 3.6e-104 382.1 250 73.6
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 6.2e-104 381.3 249 73.1
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 6.2e-104 381.3 250 73.6
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 8.1e-104 380.9 251 72.5
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 4.0e-103 378.6 252 71.4
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 5.2e-103 378.3 252 71.4
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 6.8e-103 377.9 251 73.3
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 2.6e-102 375.9 300 64.0
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 2.6e-102 375.9 251 72.5
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 3.4e-102 375.6 254 71.7
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 7.6e-102 374.4 250 72.4
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 9.9e-102 374.0 250 70.4
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 1.3e-101 373.6 250 72.0
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 2.2e-101 372.9 254 72.4
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 3.7e-101 372.1 250 72.0
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 6.4e-101 371.3 251 71.7
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 6.4e-101 371.3 250 71.2
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 6.4e-101 371.3 250 71.2
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.4e-100 370.2 250 70.4
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 1.9e-100 369.8 249 70.7
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 2.4e-100 369.4 250 71.2
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 3.2e-100 369.0 252 68.3
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 4.1e-100 368.6 250 70.8
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 5.4e-100 368.2 253 70.0
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 7.1e-100 367.9 253 69.2
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 7.1e-100 367.9 251 70.9
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 3.5e-99 365.5 248 71.4
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 4.6e-99 365.2 249 70.7
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 6.0e-99 364.8 235 77.0
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 6.0e-99 364.8 253 68.8
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 7.8e-99 364.4 251 68.1
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 1.0e-98 364.0 253 69.6
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 1.7e-98 363.2 234 74.4
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 6.6e-98 361.3 257 68.9
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 2.5e-97 359.4 249 68.7
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 3.3e-97 359.0 250 70.4
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 3.3e-97 359.0 256 68.8
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 7.3e-97 357.8 267 66.3
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 9.6e-97 357.5 257 68.9
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 9.6e-97 357.5 257 68.9
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 2.1e-96 356.3 255 69.4
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 2.8e-96 355.9 251 67.7
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 2.8e-96 355.9 251 69.3
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 3.6e-96 355.5 241 68.9
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 4.7e-96 355.1 254 66.9
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 1.4e-95 353.6 253 68.8
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 1.4e-95 353.6 254 66.5
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 5.2e-95 351.7 251 68.5
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 5.8e-94 348.2 250 65.2
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 1.3e-93 347.1 254 66.5
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 2.2e-93 346.3 251 66.9
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 2.9e-93 345.9 234 70.9
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 8.4e-93 344.4 255 67.1
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 4.2e-92 342.0 251 67.3
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 1.4e-87 327.0 233 64.8
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 7.6e-86 321.2 249 63.5
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 8.7e-82 307.8 287 59.6
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 1.3e-80 303.9 256 62.1
Aa31LG4G2750 Aethionema arabicum HOM05D006122 ORTHO05D007426 2.2e-77 293.1 240 62.1
MBI13_g36947_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D007426 4.0e-71 272.3 188 70.2
Sc01g0007910 Simmondsia chinensis HOM05D006122 ORTHO05D007426 2.6e-70 269.6 180 72.8
Duzib160G0673 Durio zibethinus HOM05D006122 ORTHO05D007426 4.5e-70 268.9 192 68.8
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 1.0e-69 267.7 288 54.5
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 1.0e-69 267.7 288 54.5
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 2.9e-69 266.2 265 54.7
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 1.1e-68 264.2 254 55.9
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 7.1e-68 261.5 270 52.6
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 2.3e-66 256.5 190 65.8
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 1.5e-65 253.8 251 55.0
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 1.9e-65 253.4 292 49.7
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 2.1e-64 250.0 251 54.2
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 2.8e-64 249.6 247 48.2
Aqoxy301s003 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 9.0e-63 244.6 177 68.4
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 3.4e-62 242.7 254 52.4
FAN09G0799 Fragaria x ananassa HOM05D006122 ORTHO05D007426 1.3e-61 240.7 171 67.3
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 6.5e-61 238.4 165 67.3
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 1.1e-57 227.6 246 43.5
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.5e-54 217.2 161 67.1
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 1.1e-52 211.1 167 62.9
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 1.4e-52 210.7 251 49.4
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 1.8e-50 203.8 121 76.9
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 7.4e-49 198.4 250 38.4
SalBow5G2173 Salvia bowleyana HOM05D006122 ORTHO05D007426 1.1e-44 184.5 173 56.1
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 2.8e-40 169.9 94 78.7
AagrBONN_evm.TU.Sc2ySwM_362.2335 Anthoceros agrestis HOM05D006122 ORTHO05D007426 4.1e-39 166.0 202 42.6
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 2.2e-32 143.7 223 33.2
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 4.0e-26 122.9 70 80.0
Actinidia31156 Actinidia chinensis HOM05D006122 ORTHO05D007426 2.0e-25 120.6 103 56.3
MCO13G567 Micromonas commoda HOM05D006122 ORTHO05D007426 2.7e-22 110.2 296 26.7
BcaB03g14993 Brassica carinata HOM05D006122 ORTHO05D007426 2.2e-21 107.1 71 70.4
CAN.G526.12 Capsicum annuum HOM05D006122 ORTHO05D007426 8.5e-21 105.1 181 38.1
Nn1g08880 Nelumbo nucifera HOM05D006122 ORTHO05D007426 1.2e-19 101.3 72 69.4
Cre02.g076750 Chlamydomonas reinhardtii HOM05D006122 ORTHO05D007426 3.5e-14 83.2 224 24.1
Actinidia31157 Actinidia chinensis HOM05D006122 ORTHO05D007426 4.0e-10 69.7 37 81.1
Oeu040921.3 Olea europaea HOM05D005310 ORTHO05D006920 3.2e-07 60.1 229 26.6
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 3.5e-06 56.6 258 22.9


User provided reference genes

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