Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.1e-258 895.2 447 100.0
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 6.8e-169 597.8 448 69.6
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 7.0e-166 587.8 519 62.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.6e-162 576.6 447 67.1
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.6e-157 560.1 449 62.8
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 4.6e-157 558.5 413 69.2
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 4.6e-157 558.5 451 61.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 8.6e-156 554.3 448 60.7
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 9.8e-152 540.8 450 61.8
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.3e-151 540.4 303 82.5
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 6.4e-151 538.1 445 60.2
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.9e-150 536.6 448 60.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.1e-150 535.4 446 60.1
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 2.1e-149 533.1 446 58.7
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.0e-149 531.6 457 59.3
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.7e-148 530.0 453 59.8
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.9e-147 526.6 447 59.3
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 9.5e-147 524.2 447 59.3
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 9.5e-147 524.2 450 61.6
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.8e-146 522.7 449 59.2
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 2.8e-146 522.7 447 58.8
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 8.1e-146 521.2 449 59.9
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 4.0e-145 518.8 447 59.1
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 6.8e-145 518.1 450 60.9
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 8.9e-145 517.7 447 60.9
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 2.0e-144 516.5 459 59.5
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 2.6e-144 516.2 447 58.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.4e-144 515.8 447 59.1
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 9.9e-144 514.2 446 58.7
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.9e-143 512.7 450 57.8
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.3e-143 511.1 450 57.6
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.2e-142 509.2 447 56.8
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.2e-141 507.3 450 57.3
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.6e-141 506.9 454 57.5
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 2.1e-141 506.5 445 60.0
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.7e-141 506.1 455 60.7
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.6e-141 505.4 450 56.9
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 6.0e-141 505.0 447 57.0
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 6.0e-141 505.0 450 60.2
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.3e-140 503.8 447 57.3
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.5e-139 500.4 447 58.2
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.5e-139 500.4 447 59.1
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.9e-139 500.0 467 58.5
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 2.5e-139 499.6 449 58.8
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.6e-138 496.9 462 59.7
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 2.8e-138 496.1 472 54.7
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.7e-138 495.4 449 58.1
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.1e-137 494.2 475 54.1
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 3.1e-137 492.7 447 57.9
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 4.0e-137 492.3 447 58.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.5e-136 490.3 446 56.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.4e-136 489.2 452 56.9
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 3.4e-136 489.2 466 57.5
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.7e-135 486.9 450 56.4
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 4.9e-135 485.3 454 57.0
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.4e-134 483.8 451 58.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.1e-133 479.9 451 57.6
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.1e-133 479.9 458 57.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.6e-133 478.8 462 54.8
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 4.6e-133 478.8 449 57.9
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.3e-132 477.2 449 55.5
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 5.1e-132 475.3 467 54.0
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 4.3e-131 472.2 415 59.3
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 4.3e-131 472.2 406 59.9
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 4.3e-131 472.2 455 54.5
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 5.6e-131 471.9 459 54.7
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 4.0e-129 465.7 302 71.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-128 464.2 306 69.6
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.5e-128 463.8 470 52.1
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.5e-128 463.8 447 56.6
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 2.0e-128 463.4 450 56.9
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 7.6e-128 461.5 308 68.8
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.7e-127 460.3 445 54.6
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.7e-127 460.3 447 57.7
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.1e-126 457.6 447 56.6
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.4e-126 457.2 455 55.6
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.4e-126 457.2 451 56.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 2.4e-126 456.4 451 56.1
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-125 452.6 329 64.1
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.7e-124 450.3 449 53.7
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 6.6e-124 448.4 470 52.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.1e-123 447.6 331 65.3
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 2.5e-123 446.4 448 55.6
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 4.3e-123 445.7 460 53.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.1e-121 441.0 446 54.0
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.3e-119 434.1 479 52.2
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.4e-118 429.9 356 61.8
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.9e-110 403.7 462 50.4
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 9.3e-110 401.4 294 63.6
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 5.3e-105 385.6 308 60.4
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.7e-103 380.6 391 54.5
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 2.5e-102 376.7 446 45.3
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.1e-101 372.1 325 54.8
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 6.1e-101 372.1 325 54.8
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 8.7e-100 368.2 230 72.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.6e-98 364.0 220 75.0
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 2.2e-98 363.6 401 50.4
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.8e-98 363.2 309 56.6
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.0e-95 354.8 375 53.6
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 2.5e-91 340.1 368 53.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.7e-91 339.0 266 59.8
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 6.9e-89 332.0 347 51.6
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 4.2e-86 322.8 352 52.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.4e-84 317.8 309 50.2
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 3.3e-83 313.2 363 50.4
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.7e-77 293.5 203 68.0
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 6.1e-69 265.8 269 46.5
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 7.0e-65 252.3 278 43.5
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 5.2e-60 236.1 208 52.4
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 5.2e-60 236.1 208 52.4
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 5.7e-59 232.6 201 60.2
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 3.5e-56 223.4 120 83.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.0e-39 168.7 190 44.2
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 5.6e-38 162.9 261 43.3
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 8.3e-34 149.1 78 85.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 3.9e-31 140.2 134 48.5
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 5.6e-30 136.3 158 46.2
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.7e-26 124.8 80 75.0
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.2e-26 124.4 124 49.2
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.4e-20 105.1 68 66.2
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 2.6e-19 100.9 74 58.1
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.3e-15 87.8 53 71.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 3.8e-10 70.5 62 48.4
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.9e-09 68.2 121 31.4
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.5e-08 63.9 59 44.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 6.0e-08 63.2 41 65.9


User provided reference genes

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