Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 1.6e-88 329.3 160 100.0
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 8.1e-56 220.7 162 68.5
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.1e-55 220.3 162 67.3
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 3.7e-53 211.8 162 67.3
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 8.1e-48 194.1 162 63.6
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 1.1e-47 193.7 162 63.6
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 1.5e-46 189.9 165 60.6
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 4.4e-46 188.3 164 62.8
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 3.8e-45 185.3 164 59.1
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 2.4e-44 182.6 162 59.9
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 1.6e-43 179.9 162 58.0
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.6e-43 179.9 165 57.6
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.1e-43 179.5 162 59.3
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 6.0e-43 177.9 165 58.8
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 1.7e-42 176.4 165 58.8
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 5.1e-42 174.9 162 56.8
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 6.6e-42 174.5 162 58.0
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 6.6e-42 174.5 161 54.7
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 8.7e-42 174.1 162 57.4
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.9e-41 172.9 163 57.7
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.9e-41 172.9 162 58.6
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 4.3e-41 171.8 164 57.9
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 5.6e-41 171.4 164 57.9
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 5.6e-41 171.4 162 57.4
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 9.6e-41 170.6 164 58.5
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 9.6e-41 170.6 164 58.5
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 9.6e-41 170.6 164 57.9
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 1.2e-40 170.2 162 56.2
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.6e-40 168.7 164 56.1
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 3.6e-40 168.7 163 57.7
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 6.2e-40 167.9 156 57.1
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 6.2e-40 167.9 199 49.2
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 6.2e-40 167.9 162 58.6
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 6.2e-40 167.9 162 55.6
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 8.1e-40 167.5 171 55.0
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.8e-39 166.4 162 56.8
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 1.5e-38 163.3 163 53.4
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.0e-38 162.9 164 55.5
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 2.0e-38 162.9 163 54.0
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 2.6e-38 162.5 162 56.8
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 2.6e-38 162.5 162 56.2
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 4.4e-38 161.8 162 54.9
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.2e-37 159.5 162 54.9
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 2.2e-37 159.5 162 53.7
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 2.9e-37 159.1 162 53.1
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 6.4e-37 157.9 162 55.6
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 8.4e-37 157.5 164 54.9
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 8.4e-37 157.5 162 54.9
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.1e-36 157.1 164 55.5
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 2.4e-36 156.0 160 55.0
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.2e-36 155.6 162 53.7
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 4.2e-36 155.2 163 53.4
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 5.4e-36 154.8 162 53.7
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 1.6e-35 153.3 162 52.5
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 2.1e-35 152.9 162 53.7
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 2.7e-35 152.5 164 52.4
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 3.5e-35 152.1 162 52.5
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.5e-35 152.1 162 51.2
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 3.5e-35 152.1 162 54.3
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 7.8e-35 151.0 163 50.3
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.3e-34 150.2 162 51.9
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 1.3e-34 150.2 163 50.3
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 1.3e-34 150.2 168 52.4
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 1.3e-34 150.2 162 50.6
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 2.3e-34 149.4 162 50.0
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 2.3e-34 149.4 162 50.0
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 6.6e-34 147.9 172 50.6
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.9e-33 146.4 165 52.1
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.9e-33 146.4 163 49.1
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 5.6e-33 144.8 162 48.1
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 7.3e-33 144.4 168 50.0
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 7.3e-33 144.4 165 51.5
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 9.6e-33 144.1 167 51.5
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 1.3e-32 143.7 161 49.1
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.6e-32 143.3 163 46.6
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.8e-32 142.5 162 50.6
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 3.6e-32 142.1 167 48.5
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 3.6e-32 142.1 164 51.8
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 6.2e-32 141.4 166 48.8
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.1e-31 140.6 167 47.9
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.8e-31 139.8 165 50.3
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.8e-31 139.8 161 53.4
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 2.4e-31 139.4 163 49.7
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 5.3e-31 138.3 165 49.7
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 5.3e-31 138.3 162 50.0
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 2.6e-30 136.0 168 50.0
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 2.6e-30 136.0 162 48.1
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 2.6e-30 136.0 165 49.1
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 7.6e-30 134.4 244 38.1
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 7.6e-30 134.4 163 49.7
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 1.3e-29 133.7 162 47.5
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 2.9e-29 132.5 193 43.0
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 3.8e-29 132.1 166 50.0
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 3.8e-29 132.1 267 34.5
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 6.4e-29 131.3 163 48.5
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 8.4e-29 131.0 192 42.7
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 8.4e-29 131.0 200 42.0
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.4e-28 130.2 169 46.7
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.9e-28 129.8 161 46.0
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 4.2e-28 128.6 153 49.7
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 5.4e-28 128.3 163 46.6
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 9.3e-28 127.5 162 48.1
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 9.3e-28 127.5 142 52.8
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 9.3e-28 127.5 164 48.2
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 1.2e-27 127.1 230 38.3
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.7e-27 125.9 167 45.5
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 7.9e-27 124.4 162 44.4
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 7.9e-27 124.4 162 44.4
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 3.0e-26 122.5 162 46.9
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 3.0e-26 122.5 224 39.3
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 3.9e-26 122.1 159 47.8
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 4.3e-25 118.6 114 52.6
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 4.3e-25 118.6 172 43.6
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 5.6e-25 118.2 163 47.2
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 9.6e-25 117.5 163 47.2
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 2.1e-24 116.3 155 48.4
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 2.1e-24 116.3 155 48.4
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 3.7e-24 115.5 81 66.7
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 1.8e-23 113.2 156 50.0
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 2.4e-23 112.8 156 50.0
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 3.1e-23 112.5 156 47.4
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 6.9e-23 111.3 158 47.5
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 9.0e-23 110.9 166 42.2
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 9.0e-23 110.9 168 39.9
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.5e-22 110.2 157 47.8
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 3.4e-22 109.0 151 48.3
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.5e-22 108.6 111 53.2
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.5e-22 108.6 180 38.3
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 9.9e-22 107.5 154 46.8
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.7e-21 106.7 155 47.1
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 2.9e-21 105.9 155 46.5
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 1.4e-20 103.6 152 46.7
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 1.4e-20 103.6 152 46.7
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.9e-20 103.2 154 43.5
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 2.5e-20 102.8 158 44.9
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 3.2e-20 102.4 152 46.7
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 5.5e-20 101.7 150 47.3
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 4.6e-19 98.6 153 45.1
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 1.0e-18 97.4 163 38.0
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 5.1e-18 95.1 79 54.4
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 6.7e-18 94.7 99 57.6
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 8.7e-18 94.4 79 60.8
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 2.5e-17 92.8 161 41.0
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 7.4e-17 91.3 81 53.1
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 4.8e-16 88.6 73 60.3
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 1.8e-15 86.7 151 41.7
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 7.6e-14 81.3 93 49.5
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.4e-12 77.0 82 52.4
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 5.5e-12 75.1 88 50.0
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 7.1e-12 74.7 120 40.8
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 7.9e-11 71.2 103 37.9
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 3.0e-10 69.3 83 48.2
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 5.1e-10 68.6 109 41.3
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.5e-09 67.0 81 50.6
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 1.9e-09 66.6 44 65.9
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 7.4e-09 64.7 87 47.1
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.4e-07 59.7 94 39.4
Actinidia03382 Actinidia chinensis HOM05D004587 ORTHO05D005512 5.9e-06 55.1 45 55.6


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