Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 7.1e-173 610.5 315 100.0
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.3e-73 280.8 318 55.3
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.4e-72 277.3 318 54.4
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 6.2e-60 235.3 301 51.2
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 1.3e-46 191.0 224 54.5
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 8.7e-46 188.3 351 41.0
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 3.3e-45 186.4 330 40.6
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.3e-44 184.5 320 39.7
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 5.9e-42 175.6 322 41.6
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.0e-41 174.9 324 41.0
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.0e-41 174.9 322 41.3
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 2.2e-41 173.7 335 43.0
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 2.2e-41 173.7 329 43.2
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-40 171.0 322 41.6
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 5.5e-40 169.1 326 40.2
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 7.2e-40 168.7 326 39.9
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 7.2e-40 168.7 323 40.9
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 2.7e-39 166.8 324 38.9
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 2.7e-39 166.8 322 39.4
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 1.0e-38 164.9 329 38.9
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 1.4e-38 164.5 326 41.7
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 8.8e-38 161.8 318 39.3
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-37 161.4 330 37.9
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-37 161.4 330 37.9
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 4.3e-37 159.5 329 38.9
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 1.3e-36 157.9 328 38.7
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 2.2e-36 157.1 319 37.9
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 2.2e-36 157.1 315 39.7
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 2.2e-36 157.1 341 37.0
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.8e-36 156.8 324 38.0
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 3.7e-36 156.4 332 38.9
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 4.8e-36 156.0 331 37.8
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.4e-35 154.5 315 38.1
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 3.1e-35 153.3 327 36.4
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 9.1e-35 151.8 325 36.9
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.0e-34 150.6 317 37.5
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 5.9e-34 149.1 326 37.1
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.9e-33 146.7 331 36.9
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.9e-33 146.7 331 36.9
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 3.8e-33 146.4 320 35.9
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 3.8e-33 146.4 325 36.0
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 3.8e-33 146.4 348 35.9
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 6.5e-33 145.6 314 36.6
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 6.5e-33 145.6 328 39.6
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 1.1e-32 144.8 369 33.6
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.9e-32 144.1 323 40.2
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 2.5e-32 143.7 307 37.8
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 3.2e-32 143.3 347 35.7
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 5.5e-32 142.5 359 36.2
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 7.9e-31 138.7 267 38.6
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 7.9e-31 138.7 222 44.6
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.4e-30 137.9 316 35.4
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.8e-30 137.5 321 36.4
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 2.3e-30 137.1 320 36.6
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.5e-29 134.4 323 37.2
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 2.6e-29 133.7 217 40.1
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 1.3e-28 131.3 319 33.9
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 1.3e-28 131.3 333 33.6
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 3.7e-28 129.8 264 37.9
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 8.2e-28 128.6 297 37.4
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 8.2e-28 128.6 343 35.3
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 4.1e-27 126.3 338 34.0
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 4.1e-27 126.3 212 42.0
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 7.0e-27 125.6 323 35.6
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.0e-25 121.7 297 35.7
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.5e-25 119.0 312 34.3
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 6.5e-25 119.0 309 35.0
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 6.5e-25 119.0 308 34.4
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 2.5e-24 117.1 350 32.6
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 1.6e-23 114.4 332 35.5
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 2.1e-23 114.0 324 34.3
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 3.6e-23 113.2 319 31.7
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 3.6e-23 113.2 332 35.2
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.0e-22 111.7 307 33.2
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.3e-22 110.5 312 32.1
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 3.9e-22 109.8 320 33.4
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 6.7e-22 109.0 318 34.3
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 6.7e-22 109.0 316 31.0
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 2.2e-20 104.0 324 31.2
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 2.8e-20 103.6 253 37.9
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 2.8e-20 103.6 345 29.9
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 1.4e-19 101.3 356 31.5
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 3.8e-17 93.2 343 30.9
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 4.4e-13 79.7 327 28.7
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 1.3e-12 78.2 208 37.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.7e-12 77.8 267 32.6
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.6e-10 71.2 86 47.7
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 1.3e-09 68.2 240 30.8
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 2.9e-09 67.0 158 33.5
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 2.5e-08 63.9 294 28.9
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 9.4e-08 62.0 79 43.0
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 9.4e-08 62.0 314 25.5
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 1.2e-07 61.6 255 28.2
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 1.0e-06 58.5 172 32.0


User provided reference genes

Program Settings