Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.3e-134 482.3 248 100.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 4.7e-103 378.3 229 85.6
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 2.8e-100 369.0 224 84.8
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 4.1e-99 365.2 223 82.5
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 4.1e-99 365.2 223 82.5
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 3.8e-97 358.6 223 81.6
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.9e-96 356.3 228 80.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-96 356.3 222 81.5
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.5e-96 355.9 226 80.1
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.2e-95 353.6 228 79.4
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 3.0e-94 349.0 223 79.8
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 2.6e-93 345.9 217 80.6
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 9.8e-93 344.0 221 79.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 2.8e-92 342.4 226 78.3
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 3.7e-92 342.0 221 76.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 3.7e-92 342.0 215 80.5
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 4.9e-92 341.7 222 78.4
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 4.9e-92 341.7 226 78.3
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.9e-92 341.7 222 78.4
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 1.1e-91 340.5 228 76.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.8e-91 339.7 228 75.9
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.8e-91 339.7 228 75.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.4e-91 339.3 221 77.8
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 2.4e-91 339.3 228 73.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.1e-91 339.0 219 78.5
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.1e-91 339.0 226 77.9
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 4.1e-91 338.6 234 74.8
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 5.4e-91 338.2 228 75.4
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 9.2e-91 337.4 219 79.0
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.2e-90 337.0 226 77.4
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 2.0e-90 336.3 220 75.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 2.0e-90 336.3 224 76.3
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 2.7e-90 335.9 226 77.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.5e-90 335.5 217 77.9
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 5.9e-90 334.7 226 77.0
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.0e-89 334.0 217 78.8
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.0e-89 334.0 222 76.6
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 2.3e-89 332.8 220 75.5
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.3e-89 332.8 217 77.9
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.8e-89 332.0 219 75.3
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 3.8e-89 332.0 222 75.2
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 8.6e-89 330.9 226 75.7
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 8.6e-89 330.9 226 75.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.1e-88 330.5 248 71.0
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.1e-88 330.5 248 71.0
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 2.5e-88 329.3 230 73.5
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 4.3e-88 328.6 217 77.9
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 4.3e-88 328.6 224 74.6
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 4.3e-88 328.6 217 78.8
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 5.6e-88 328.2 217 77.9
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 5.6e-88 328.2 220 75.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 7.3e-88 327.8 217 77.0
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 7.3e-88 327.8 223 76.2
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 7.3e-88 327.8 249 70.3
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 9.5e-88 327.4 216 77.8
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 9.5e-88 327.4 225 76.4
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.2e-87 327.0 222 74.3
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.1e-87 326.2 216 76.9
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.1e-87 326.2 225 76.0
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 2.8e-87 325.9 217 77.4
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.8e-87 325.9 219 74.9
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.7e-87 325.1 217 76.5
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 4.7e-87 325.1 217 76.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 6.1e-87 324.7 216 77.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 6.1e-87 324.7 217 74.7
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 8.0e-87 324.3 217 77.0
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.0e-86 323.9 221 75.6
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.0e-86 323.9 217 76.0
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 2.3e-86 322.8 222 72.1
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 6.8e-86 321.2 217 76.5
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 8.9e-86 320.9 217 75.1
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.2e-85 320.5 192 87.0
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 3.4e-85 318.9 210 76.2
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.3e-84 317.0 213 76.1
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.7e-84 316.6 252 67.9
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 4.9e-84 315.1 210 74.8
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.4e-84 314.7 207 76.8
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 6.4e-84 314.7 215 76.3
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-82 310.1 215 75.8
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.6e-82 310.1 217 76.0
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 2.0e-82 309.7 216 74.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 3.0e-81 305.8 217 75.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.1e-80 303.9 204 77.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.3e-80 302.4 207 74.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.6e-79 300.1 228 70.6
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 3.6e-79 298.9 202 75.7
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.7e-79 298.5 226 71.7
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.8e-78 296.6 216 69.9
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.5e-72 276.2 205 71.2
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.5e-72 276.2 223 65.9
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 5.6e-72 275.0 216 64.4
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 4.7e-71 271.9 215 63.7
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.1e-70 270.8 179 79.9
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 2.6e-69 266.2 182 76.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.4e-69 265.4 217 63.1
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 1.3e-68 263.8 211 68.2
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.7e-68 263.5 216 63.4
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.7e-68 263.5 226 65.9
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.9e-68 262.7 240 61.7
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 1.7e-65 253.4 183 73.2
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 1.2e-63 247.3 223 61.4
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-62 243.4 163 81.0
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.1e-57 225.3 143 76.2
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.1e-56 224.2 149 80.5
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 6.9e-54 214.9 146 79.5
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 9.3e-51 204.5 179 62.6
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 4.0e-46 189.1 132 75.0
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 3.8e-44 182.6 129 76.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 2.4e-43 179.9 122 79.5
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.4e-38 164.1 108 78.7
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 7.9e-34 148.3 125 64.0
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 8.7e-33 144.8 145 59.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.3e-32 142.5 220 40.9
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.6e-31 140.6 84 75.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 5.8e-29 132.1 213 36.2
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 4.6e-26 122.5 205 36.1
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 6.9e-22 108.6 110 59.1
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.2e-21 107.8 110 58.2
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 3.2e-19 99.8 78 56.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 9.4e-19 98.2 98 59.2
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 3.3e-16 89.7 109 49.5
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.0e-13 80.5 40 82.5


User provided reference genes

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