Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14130 Selenicereus undatus HOM05D001975 ORTHO05D011412 4.4e-74 281.2 140 100.0
Ah.03g139750 Amaranthus hybridus HOM05D001975 ORTHO05D011412 1.2e-42 176.8 137 65.7
Sc03g0000990 Simmondsia chinensis HOM05D001975 ORTHO05D011412 5.4e-32 141.4 187 46.5
Gohir.A11G044500 Gossypium hirsutum HOM05D001975 ORTHO05D011412 2.1e-28 129.4 111 55.0
Duzib147G1176 Durio zibethinus HOM05D001975 ORTHO05D011412 1.8e-27 126.3 156 44.2
Thecc.01G042900 Theobroma cacao HOM05D001975 ORTHO05D011412 9.9e-26 120.6 96 57.3
Ciclev10026644m.g Citrus clementina HOM05D001975 ORTHO05D011412 1.3e-25 120.2 97 60.8
Prupe.7G147700 Prunus persica HOM05D001975 ORTHO05D011412 3.8e-25 118.6 102 57.8
PGR119G0929 Punica granatum HOM05D001975 ORTHO05D011412 3.8e-25 118.6 102 54.9
Sabra07G0027800 Salix brachista HOM05D001975 ORTHO05D011412 1.4e-24 116.7 102 56.9
GSVIVG01019037001 Vitis vinifera HOM05D001975 ORTHO05D011412 1.4e-24 116.7 156 42.3
Eucgr.I02482 Eucalyptus grandis HOM05D001975 ORTHO05D011412 1.9e-24 116.3 102 54.9
QL06p044648 Quercus lobata HOM05D001975 ORTHO05D011412 1.2e-23 113.6 101 54.5
Gorai.007G051600 Gossypium raimondii HOM05D000225 ORTHO05D001817 2.1e-23 112.8 103 52.4
MD15G1270400 Malus domestica HOM05D001975 ORTHO05D011412 1.8e-22 109.8 102 52.9
Potri.007G032000 Populus trichocarpa HOM05D001975 ORTHO05D011412 1.5e-21 106.7 102 54.9
TWI09G0849 Tripterygium wilfordii HOM05D001975 ORTHO05D011412 3.3e-21 105.5 102 47.1
TAR381G1222 Trochodendron aralioides HOM05D001975 ORTHO05D011412 2.8e-20 102.4 96 51.0
Manes.13G135100 Manihot esculenta HOM05D001975 ORTHO05D011412 8.1e-20 100.9 154 38.3
Haze_15146 Corylus avellana HOM05D000225 ORTHO05D001817 1.1e-19 100.5 99 53.5
FvH4_1g14181 Fragaria vesca HOM05D001975 ORTHO05D011412 4.0e-19 98.6 106 50.0
RcHm_v2.0_Chr2g0102851 Rosa chinensis HOM05D001975 ORTHO05D011412 1.2e-18 97.1 106 49.1
Atru.chr3.500 Acer truncatum HOM05D001975 ORTHO05D011412 4.5e-18 95.1 156 39.7
AUR62008026 Chenopodium quinoa HOM05D000225 ORTHO05D011412 1.3e-17 93.6 165 42.4
Atru.chr3.501 Acer truncatum HOM05D001975 ORTHO05D011412 1.9e-16 89.7 103 49.5
CANSAT01G1886 Cannabis sativa HOM05D001975 ORTHO05D011412 9.3e-16 87.4 114 45.6
Oeu049322.1 Olea europaea HOM05D001975 ORTHO05D011412 1.2e-15 87.0 100 50.0
Dinv26792 Davidia involucrata HOM05D000225 ORTHO05D001817 7.9e-15 84.3 121 39.7
Gohir.D11G048000 Gossypium hirsutum HOM05D001975 ORTHO05D011412 7.9e-15 84.3 145 35.9
FAN23G1734 Fragaria x ananassa HOM05D001975 ORTHO05D011412 8.7e-14 80.9 68 57.4
Gorai.008G070300 Gossypium raimondii HOM05D001975 ORTHO05D011412 8.7e-14 80.9 75 57.3
AUR62003206 Chenopodium quinoa HOM05D000225 ORTHO05D001817 5.7e-13 78.2 125 44.0
CiPaw.01G031600 Carya illinoinensis HOM05D001975 ORTHO05D011412 1.3e-12 77.0 68 54.4
FAN26G1917 Fragaria x ananassa HOM05D000225 ORTHO05D001817 1.3e-12 77.0 71 56.3
FAN23G2412 Fragaria x ananassa HOM05D000225 ORTHO05D001817 3.1e-11 72.4 79 49.4
FvH4_1g14252 Fragaria vesca HOM05D001975 ORTHO05D011412 9.0e-11 70.9 60 56.7
COL.COLO4_22150 Corchorus olitorius HOM05D001975 ORTHO05D011412 5.0e-09 65.1 116 36.2
MELO3C007508.2 Cucumis melo HOM05D001975 ORTHO05D002436 6.1e-07 58.2 112 33.9
PGR102G2744 Punica granatum HOM05D001975 ORTHO05D002436 7.9e-07 57.8 89 40.4
CDE04G0147 Ceratophyllum demersum HOM05D001975 ORTHO05D002436 1.0e-06 57.4 77 45.5
SGA_v2.0_scaffold204G41630 Striga asiatica HOM05D001975 ORTHO05D002436 1.0e-06 57.4 112 33.9
Nitab4.5_0003816g0100 Nicotiana tabacum HOM05D001975 ORTHO05D002436 5.1e-06 55.1 87 39.1
ATR0733G021 Amborella trichopoda HOM05D001975 ORTHO05D002436 6.7e-06 54.7 77 44.2


User provided reference genes

Program Settings