Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14017 Selenicereus undatus HOM05D005163 ORTHO05D006462 4.3e-52 207.6 97 100.0
Ah.02g124830 Amaranthus hybridus HOM05D005163 ORTHO05D006462 6.0e-30 134.0 84 72.6
Gohir.D12G062000 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.9e-28 129.0 84 69.0
Atru.chr3.745 Acer truncatum HOM05D005163 ORTHO05D006462 2.5e-28 128.6 84 67.9
MSTRG.23270 Avicennia marina HOM05D005163 ORTHO05D006462 2.5e-28 128.6 84 67.9
MELO3C007876.2 Cucumis melo HOM05D005163 ORTHO05D006462 4.3e-28 127.9 84 69.0
Sed0022975 Sechium edule HOM05D005163 ORTHO05D006462 4.3e-28 127.9 84 69.0
Ciclev10025040m.g Citrus clementina HOM05D005163 ORTHO05D006462 5.6e-28 127.5 84 69.0
Migut.H02494 Erythranthe guttata HOM05D005163 ORTHO05D006462 5.6e-28 127.5 84 70.2
Gohir.A12G062100 Gossypium hirsutum HOM05D005163 ORTHO05D006462 5.6e-28 127.5 84 67.9
Gorai.008G065200 Gossypium raimondii HOM05D005163 ORTHO05D006462 5.6e-28 127.5 84 67.9
COL.COLO4_21984 Corchorus olitorius HOM05D005163 ORTHO05D006462 7.4e-28 127.1 84 66.7
Haze_03825 Corylus avellana HOM05D005163 ORTHO05D006462 7.4e-28 127.1 84 69.0
Sed0007947 Sechium edule HOM05D005163 ORTHO05D006462 7.4e-28 127.1 84 69.0
Oeu024029.1 Olea europaea HOM05D005163 ORTHO05D006462 9.6e-28 126.7 84 70.2
Aqoxy5G01510 Aquilegia oxysepala HOM05D005163 ORTHO05D006462 1.3e-27 126.3 84 67.9
Os02g0100700 Oryza sativa ssp. japonica HOM05D005163 ORTHO05D006462 1.3e-27 126.3 84 67.9
PGR102G2820 Punica granatum HOM05D005163 ORTHO05D006462 1.3e-27 126.3 84 65.5
Hma1.2p1_0913F.1_g236050 Hydrangea macrophylla HOM05D005163 ORTHO05D006462 1.6e-27 125.9 84 66.7
SalBow8G4654 Salvia bowleyana HOM05D005163 ORTHO05D006462 1.6e-27 125.9 84 66.7
Thecc.01G025400 Theobroma cacao HOM05D005163 ORTHO05D006462 1.6e-27 125.9 84 65.5
Duzib187G1632 Durio zibethinus HOM05D005163 ORTHO05D006462 2.1e-27 125.6 84 65.5
Eucgr.J02388 Eucalyptus grandis HOM05D005163 ORTHO05D006462 2.1e-27 125.6 84 65.5
Manes.02G100000 Manihot esculenta HOM05D005163 ORTHO05D006462 2.1e-27 125.6 84 67.9
SGA_v2.0_scaffold280G46851 Striga asiatica HOM05D005163 ORTHO05D006462 2.1e-27 125.6 84 69.0
TPR.G2381 Trifolium pratense HOM05D005163 ORTHO05D006462 2.1e-27 125.6 84 70.2
Ca_24882_v3 Cicer arietinum L. HOM05D005163 ORTHO05D006462 2.8e-27 125.2 84 70.2
Lj4C212G4 Lonicera japonica HOM05D005163 ORTHO05D006462 2.8e-27 125.2 84 67.9
Cfa006924 Carpinus fangiana HOM05D005163 ORTHO05D006462 3.7e-27 124.8 84 67.9
Actinidia26108 Actinidia chinensis HOM05D005163 ORTHO05D006462 4.8e-27 124.4 84 67.9
Potri.005G118300 Populus trichocarpa HOM05D005163 ORTHO05D006462 4.8e-27 124.4 85 69.4
CsaV3_6G046790 Cucumis sativus L. HOM05D005163 ORTHO05D006462 6.2e-27 124.0 84 67.9
PSO675G4614 Papaver somniferum HOM05D005163 ORTHO05D006462 6.2e-27 124.0 84 67.9
Lj2g0010053 Lotus japonicus HOM05D005163 ORTHO05D006462 8.1e-27 123.6 84 67.9
PSO541G1023 Papaver somniferum HOM05D005163 ORTHO05D006462 8.1e-27 123.6 84 67.9
Aa31LG4G19160 Aethionema arabicum HOM05D005163 ORTHO05D006462 1.1e-26 123.2 76 72.4
arahy.Tifrunner.gnm1.ann1.U2HICA Arachis hypogaea HOM05D005163 ORTHO05D006462 1.1e-26 123.2 84 66.7
arahy.Tifrunner.gnm1.ann1.U51VHD Arachis hypogaea HOM05D005163 ORTHO05D006462 1.1e-26 123.2 84 66.7
Lalb_Chr05g0212611 Lupinus albus HOM05D005163 ORTHO05D006462 1.1e-26 123.2 84 66.7
Peaxi162Scf00084g01221 Petunia axillaris HOM05D005163 ORTHO05D006462 1.1e-26 123.2 84 66.7
QL06p034609 Quercus lobata HOM05D005163 ORTHO05D006462 1.1e-26 123.2 84 66.7
DCAR_031672 Daucus carota HOM05D005163 ORTHO05D006462 1.4e-26 122.9 84 67.9
TAR376G0780 Trochodendron aralioides HOM05D005163 ORTHO05D006462 1.4e-26 122.9 84 65.5
Cc07_g10240 Coffea canephora HOM05D005163 ORTHO05D006462 1.8e-26 122.5 84 65.5
Psat2g156920 Pisum sativum HOM05D005163 ORTHO05D006462 1.8e-26 122.5 84 67.9
Sc03g0003300 Simmondsia chinensis HOM05D005163 ORTHO05D006462 1.8e-26 122.5 84 66.7
Gorai.007G198300 Gossypium raimondii HOM05D005163 ORTHO05D006462 2.4e-26 122.1 84 63.1
Potri.007G017600 Populus trichocarpa HOM05D005163 ORTHO05D006462 2.4e-26 122.1 85 67.1
Hund16465 Selenicereus undatus HOM05D005163 ORTHO05D006462 2.4e-26 122.1 89 65.2
Carub.0005s1745 Capsella rubella HOM05D005163 ORTHO05D006462 3.1e-26 121.7 76 69.7
ClCG01G020030 Citrullus lanatus HOM05D005163 ORTHO05D006462 3.1e-26 121.7 88 65.9
RcHm_v2.0_Chr2g0100261 Rosa chinensis HOM05D005163 ORTHO05D006462 3.1e-26 121.7 84 66.7
Zm00001eb228990 Zea mays HOM05D005163 ORTHO05D006462 3.1e-26 121.7 84 63.1
AL5G31470 Arabidopsis lyrata HOM05D005163 ORTHO05D006462 4.0e-26 121.3 76 69.7
CSS0019296 Camellia sinensis var. sinensis HOM05D005163 ORTHO05D006462 4.0e-26 121.3 84 64.3
CARHR160630 Cardamine hirsuta HOM05D005163 ORTHO05D006462 4.0e-26 121.3 76 69.7
CiPaw.07G054500 Carya illinoinensis HOM05D005163 ORTHO05D006462 4.0e-26 121.3 76 71.1
AUR62004121 Chenopodium quinoa HOM05D005163 ORTHO05D006462 5.3e-26 120.9 99 60.6
FvH4_1g12400 Fragaria vesca HOM05D005163 ORTHO05D006462 5.3e-26 120.9 84 66.7
MD15G1250800 Malus domestica HOM05D005163 ORTHO05D006462 5.3e-26 120.9 84 65.5
GSVIVG01018847001 Vitis vinifera HOM05D005163 ORTHO05D006462 5.3e-26 120.9 84 64.3
Nitab4.5_0007070g0020 Nicotiana tabacum HOM05D005163 ORTHO05D006462 6.9e-26 120.6 84 64.3
Sabra07G0015000 Salix brachista HOM05D005163 ORTHO05D006462 6.9e-26 120.6 84 64.3
HanXRQChr07g0191281 Helianthus annuus HOM05D005163 ORTHO05D006462 9.0e-26 120.2 84 65.5
Lsat_1_v5_gn_2_78240 Lactuca sativa HOM05D005163 ORTHO05D006462 1.2e-25 119.8 84 64.3
Nitab4.5_0000723g0040 Nicotiana tabacum HOM05D005163 ORTHO05D006462 1.2e-25 119.8 84 64.3
Prupe.7G163500 Prunus persica HOM05D005163 ORTHO05D006462 1.2e-25 119.8 84 66.7
Duzib147G0248 Durio zibethinus HOM05D005163 ORTHO05D006462 1.5e-25 119.4 84 60.7
Gohir.A11G178900 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.5e-25 119.4 84 61.9
MD02G1137100 Malus domestica HOM05D005163 ORTHO05D006462 1.5e-25 119.4 84 64.3
ECA238G0541 Erigeron canadensis HOM05D005163 ORTHO05D006462 2.6e-25 118.6 84 64.3
Lalb_Chr16g0377681 Lupinus albus HOM05D005163 ORTHO05D006462 2.6e-25 118.6 84 65.5
AT3G51050 Arabidopsis thaliana HOM05D005163 ORTHO05D006462 3.4e-25 118.2 76 68.4
A03p48100 Brassica napus HOM05D005163 ORTHO05D006462 3.4e-25 118.2 76 64.5
C07p46120 Brassica napus HOM05D005163 ORTHO05D006462 3.4e-25 118.2 76 64.5
BolC7t45128H Brassica oleracea HOM05D005163 ORTHO05D006462 3.4e-25 118.2 76 64.5
BcaC06g33060 Brassica carinata HOM05D005163 ORTHO05D006462 4.5e-25 117.9 76 64.5
Glyma.11G072700 Glycine max HOM05D005163 ORTHO05D006462 4.5e-25 117.9 84 64.3
HanXRQChr14g0441521 Helianthus annuus HOM05D005163 ORTHO05D006462 4.5e-25 117.9 84 64.3
Sp5g11160 Schrenkiella parvula HOM05D005163 ORTHO05D006462 4.5e-25 117.9 76 65.8
VMungo1215G3295 Vigna mungo HOM05D005163 ORTHO05D006462 4.5e-25 117.9 84 64.3
Dinv33585 Davidia involucrata HOM05D005163 ORTHO05D006462 5.8e-25 117.5 78 70.5
TWI73G0422 Tripterygium wilfordii HOM05D005163 ORTHO05D006462 7.6e-25 117.1 84 64.3
AUR62007635 Chenopodium quinoa HOM05D005163 ORTHO05D006462 9.9e-25 116.7 99 58.6
Thhalv10010167m.g Eutrema salsugineum HOM05D005163 ORTHO05D006462 1.3e-24 116.3 76 67.1
Phvul.002G166800 Phaseolus vulgaris HOM05D005163 ORTHO05D006462 1.3e-24 116.3 84 64.3
CDE04G3147 Ceratophyllum demersum HOM05D005163 ORTHO05D006462 1.7e-24 115.9 84 64.3
THA.LOC104826639 Tarenaya hassleriana HOM05D005163 ORTHO05D006462 2.2e-24 115.5 84 60.7
Oeu005146.2 Olea europaea HOM05D005163 ORTHO05D006462 2.9e-24 115.2 105 56.2
PGSC0003DMG400003539 Solanum tuberosum HOM05D005163 ORTHO05D006462 2.9e-24 115.2 84 63.1
Glyma.01G170600 Glycine max HOM05D005163 ORTHO05D006462 3.8e-24 114.8 84 63.1
Sabra05G0097300 Salix brachista HOM05D005163 ORTHO05D006462 8.4e-24 113.6 85 65.9
Solyc02g084690.3 Solanum lycopersicum HOM05D005163 ORTHO05D006462 1.4e-23 112.8 84 60.7
Sopen02g029360 Solanum pennellii HOM05D005163 ORTHO05D006462 1.4e-23 112.8 84 60.7
CANSAT01G3091 Cannabis sativa HOM05D005163 ORTHO05D006462 4.2e-23 111.3 76 67.1
Medtr5g021150 Medicago truncatula HOM05D005163 ORTHO05D006462 5.5e-23 110.9 85 63.5
HPP92_021000 Vanilla planifolia HOM05D005163 ORTHO05D006462 7.1e-23 110.5 84 58.3
CAN.G358.18 Capsicum annuum HOM05D005163 ORTHO05D006462 1.8e-21 105.9 84 57.1
Rhsim08G0123900 Rhododendron simsii HOM05D005163 ORTHO05D006462 1.1e-20 103.2 97 53.6
ATR0661G156 Amborella trichopoda HOM05D005163 ORTHO05D006462 1.5e-20 102.8 76 57.9
Nn5g29168 Nelumbo nucifera HOM05D005163 ORTHO05D006462 1.3e-19 99.8 88 52.3
Mapoly0159s0016 Marchantia polymorpha HOM05D005163 ORTHO05D006462 6.5e-16 87.4 76 50.0
EL10As8g23870 Beta vulgaris HOM05D005163 ORTHO05D006462 4.2e-15 84.7 84 53.6
Dinv40040 Davidia involucrata HOM05D005163 ORTHO05D006462 4.6e-14 81.3 84 50.0
Cpa.g.sc6.195 Carica papaya HOM05D005163 ORTHO05D006462 1.0e-13 80.1 84 50.0
Pp3c2_37540 Physcomitrium patens HOM05D005163 ORTHO05D006462 3.0e-13 78.6 76 48.7
Actinidia19230 Actinidia chinensis HOM05D005163 ORTHO05D006462 5.1e-13 77.8 69 58.0
Gohir.D11G186500 Gossypium hirsutum HOM05D005163 ORTHO05D006462 1.1e-12 76.6 84 46.4
C08p26360 Brassica napus HOM05D005163 ORTHO05D006462 1.5e-12 76.3 43 72.1
Pp3c2_36750 Physcomitrium patens HOM05D005163 ORTHO05D006462 1.5e-12 76.3 76 46.1
Pp3c2_36751 Physcomitrium patens HOM05D005163 ORTHO05D006462 1.5e-12 76.3 76 46.1
AagrBONN_evm.TU.Sc2ySwM_368.2341 Anthoceros agrestis HOM05D005163 ORTHO05D006462 1.9e-12 75.9 76 43.4
FAN19G3097 Fragaria x ananassa HOM05D005163 ORTHO05D006462 2.5e-12 75.5 84 48.8
FAN28G1722 Fragaria x ananassa HOM05D005163 ORTHO05D006462 2.5e-12 75.5 84 48.8
vmacro17732 Vaccinium macrocarpon HOM05D005163 ORTHO05D006462 3.3e-12 75.1 84 45.2
FAN23G1678 Fragaria x ananassa HOM05D005163 ORTHO05D006462 7.4e-12 73.9 84 47.6
Pp3c11_13530 Physcomitrium patens HOM05D005163 ORTHO05D006462 7.4e-12 73.9 76 43.4
unitig_699.g19557 Utricularia gibba HOM05D005163 ORTHO05D006462 9.7e-12 73.6 84 44.0
SMO340G0175 Selaginella moellendorffii HOM05D005163 ORTHO05D006462 1.6e-11 72.8 76 40.8
CBR_g41477 Chara braunii HOM05D005163 ORTHO05D006462 2.8e-11 72.0 88 40.9
Cre07.g336050 Chlamydomonas reinhardtii HOM05D005163 ORTHO05D006462 8.2e-11 70.5 85 38.8
MCO09G435 Micromonas commoda HOM05D005163 ORTHO05D006462 5.9e-09 64.3 79 39.2


User provided reference genes

Program Settings