Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13979 Selenicereus undatus HOM05D004251 ORTHO05D005010 1.7e-58 229.2 117 100.0
Prupe.7G154900 Prunus persica HOM05D004251 ORTHO05D005010 6.8e-28 127.5 103 65.0
Oeu033644.1 Olea europaea HOM05D004251 ORTHO05D005010 5.8e-27 124.4 103 63.1
unitig_21.g20954 Utricularia gibba HOM05D004251 ORTHO05D005010 5.8e-27 124.4 103 61.2
QL06p046182 Quercus lobata HOM05D004251 ORTHO05D005010 7.5e-27 124.0 103 61.2
Sc03g0002980 Simmondsia chinensis HOM05D004251 ORTHO05D005010 7.5e-27 124.0 103 63.1
QL06p046103 Quercus lobata HOM05D004251 ORTHO05D005010 1.3e-26 123.2 103 60.2
GSVIVG01018958001 Vitis vinifera HOM05D004251 ORTHO05D005010 1.3e-26 123.2 103 61.2
Sed0017564 Sechium edule HOM05D004251 ORTHO05D005010 2.2e-26 122.5 86 67.4
Hund13977 Selenicereus undatus HOM05D004251 ORTHO05D005010 2.9e-26 122.1 103 60.2
Atru.chr3.571 Acer truncatum HOM05D004251 ORTHO05D005010 4.9e-26 121.3 103 60.2
ClCG01G019560 Citrullus lanatus HOM05D004251 ORTHO05D005010 4.9e-26 121.3 86 67.4
SGA_v2.0_scaffold614G53203 Striga asiatica HOM05D004251 ORTHO05D005010 4.9e-26 121.3 103 63.1
Actinidia36561 Actinidia chinensis HOM05D004251 ORTHO05D005010 6.4e-26 120.9 103 58.3
THA.LOC104821294 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 6.4e-26 120.9 103 58.3
Peaxi162Scf00366g00011 Petunia axillaris HOM05D004251 ORTHO05D005010 8.3e-26 120.6 103 63.1
THA.LOC104821290 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 8.3e-26 120.6 103 58.3
THA.LOC104821560 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 8.3e-26 120.6 103 58.3
MSTRG.2762 Avicennia marina HOM05D004251 ORTHO05D005010 1.1e-25 120.2 103 58.3
Ciclev10025293m.g Citrus clementina HOM05D004251 ORTHO05D005010 1.1e-25 120.2 103 60.2
Dinv13532 Davidia involucrata HOM05D004251 ORTHO05D005010 1.1e-25 120.2 86 67.4
Lsat_1_v5_gn_4_152121 Lactuca sativa HOM05D004251 ORTHO05D005010 1.1e-25 120.2 86 66.3
Cpa.g.sc39.20 Carica papaya HOM05D004251 ORTHO05D005010 1.4e-25 119.8 86 65.1
CsaV3_6G046240 Cucumis sativus L. HOM05D004251 ORTHO05D005010 1.4e-25 119.8 86 67.4
Prupe.7G154800 Prunus persica HOM05D004251 ORTHO05D005010 1.9e-25 119.4 103 60.2
PGR102G3108 Punica granatum HOM05D004251 ORTHO05D005010 1.9e-25 119.4 86 66.3
RcHm_v2.0_Chr2g0101541 Rosa chinensis HOM05D004251 ORTHO05D005010 1.9e-25 119.4 86 66.3
FAN26G0083 Fragaria x ananassa HOM05D004251 ORTHO05D005010 2.4e-25 119.0 86 65.1
Hma1.2p1_0400F.1_g144420 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 2.4e-25 119.0 103 60.2
TWI73G1034 Tripterygium wilfordii HOM05D004251 ORTHO05D005010 2.4e-25 119.0 103 56.3
FAN23G1347 Fragaria x ananassa HOM05D004251 ORTHO05D005010 3.2e-25 118.6 86 64.0
PGR102G0408 Punica granatum HOM05D004251 ORTHO05D005010 3.2e-25 118.6 103 59.2
Thecc.01G035500 Theobroma cacao HOM05D004251 ORTHO05D005010 3.2e-25 118.6 103 62.1
GSVIVG01018957001 Vitis vinifera HOM05D004251 ORTHO05D005010 4.1e-25 118.2 104 58.7
COL.COLO4_22077 Corchorus olitorius HOM05D004251 ORTHO05D005010 5.4e-25 117.9 103 60.2
Duzib147G1661 Durio zibethinus HOM05D004251 ORTHO05D005010 5.4e-25 117.9 103 62.1
Dinv39988 Davidia involucrata HOM05D004251 ORTHO05D005010 7.0e-25 117.5 103 59.2
Cc11_g04410 Coffea canephora HOM05D004251 ORTHO05D005010 9.2e-25 117.1 103 58.3
CANSAT01G2654 Cannabis sativa HOM05D004251 ORTHO05D005010 1.2e-24 116.7 103 56.3
ECA232G3289 Erigeron canadensis HOM05D004251 ORTHO05D005010 1.2e-24 116.7 108 55.6
Sed0021773 Sechium edule HOM05D004251 ORTHO05D005010 1.2e-24 116.7 103 57.3
COL.COLO4_22078 Corchorus olitorius HOM05D004251 ORTHO05D005010 1.6e-24 116.3 108 55.6
Hma1.2p1_0224F.1_g094630 Hydrangea macrophylla HOM05D004251 ORTHO05D005010 1.6e-24 116.3 103 59.2
CiPaw.01G038300 Carya illinoinensis HOM05D004251 ORTHO05D005010 2.0e-24 115.9 103 58.3
CDE04G2049 Ceratophyllum demersum HOM05D004251 ORTHO05D005010 2.0e-24 115.9 103 59.2
FvH4_1g13300 Fragaria vesca HOM05D004251 ORTHO05D005010 2.0e-24 115.9 86 62.8
FAN19G0724 Fragaria x ananassa HOM05D004251 ORTHO05D005010 2.0e-24 115.9 86 62.8
Nitab4.5_0000178g0050 Nicotiana tabacum HOM05D004251 ORTHO05D005010 2.0e-24 115.9 103 61.2
Ah.03g140880 Amaranthus hybridus HOM05D004251 ORTHO05D005010 2.7e-24 115.5 103 58.3
CSS0006960 Camellia sinensis var. sinensis HOM05D004251 ORTHO05D005010 2.7e-24 115.5 103 57.3
Thecc.01G035600 Theobroma cacao HOM05D004251 ORTHO05D005010 2.7e-24 115.5 108 56.5
Manes.02G094600 Manihot esculenta HOM05D004251 ORTHO05D005010 3.5e-24 115.2 103 56.3
BcaC09g50275 Brassica carinata HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
BcaC09g50281 Brassica carinata HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
A01p21680 Brassica napus HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
C01p27030 Brassica napus HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
BolC1t02651H Brassica oleracea HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
BraA01t02077Z Brassica rapa HOM05D004251 ORTHO05D005010 4.6e-24 114.8 103 56.3
Aa31LG1G15090 Aethionema arabicum HOM05D004251 ORTHO05D005010 6.0e-24 114.4 103 56.3
Gohir.A02G165500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 6.0e-24 114.4 103 56.3
Gohir.D03G014500 Gossypium hirsutum HOM05D004251 ORTHO05D005010 6.0e-24 114.4 103 56.3
Gorai.003G014800 Gossypium raimondii HOM05D004251 ORTHO05D005010 6.0e-24 114.4 103 56.3
EL10Ac6g15559 Beta vulgaris HOM05D004251 ORTHO05D005010 7.8e-24 114.0 103 59.2
CARHR281200 Cardamine hirsuta HOM05D004251 ORTHO05D005010 7.8e-24 114.0 103 56.3
MD02G1147300 Malus domestica HOM05D004251 ORTHO05D005010 7.8e-24 114.0 85 65.9
Phvul.003G253700 Phaseolus vulgaris HOM05D004251 ORTHO05D005010 7.8e-24 114.0 103 58.3
arahy.Tifrunner.gnm1.ann1.UMLA17 Arachis hypogaea HOM05D004251 ORTHO05D005010 1.0e-23 113.6 103 57.3
TAR625G0258 Trochodendron aralioides HOM05D004251 ORTHO05D005010 1.0e-23 113.6 104 59.6
MD15G1261600 Malus domestica HOM05D004251 ORTHO05D005010 1.3e-23 113.2 86 64.0
PGSC0003DMG402003505 Solanum tuberosum HOM05D004251 ORTHO05D005010 1.3e-23 113.2 103 61.2
DCAR_017290 Daucus carota HOM05D004251 ORTHO05D005010 1.7e-23 112.8 103 56.3
HanXRQChr09g0274621 Helianthus annuus HOM05D004251 ORTHO05D005010 1.7e-23 112.8 108 58.3
Nitab4.5_0001385g0110 Nicotiana tabacum HOM05D004251 ORTHO05D005010 1.7e-23 112.8 103 59.2
Sopen02g029950 Solanum pennellii HOM05D004251 ORTHO05D005010 1.7e-23 112.8 103 60.2
CAN.G358.93 Capsicum annuum HOM05D004251 ORTHO05D005010 2.3e-23 112.5 103 61.2
CsaV3_4G005780 Cucumis sativus L. HOM05D004251 ORTHO05D005010 2.3e-23 112.5 103 55.3
Medtr8g077580 Medicago truncatula HOM05D004251 ORTHO05D005010 2.3e-23 112.5 103 57.3
Sabra07G0022400 Salix brachista HOM05D004251 ORTHO05D005010 2.3e-23 112.5 103 55.3
Ciclev10025284m.g Citrus clementina HOM05D004251 ORTHO05D005010 3.0e-23 112.1 103 58.3
Glyma.16G139600 Glycine max HOM05D004251 ORTHO05D005010 3.0e-23 112.1 103 57.3
Lj1g0003281 Lotus japonicus HOM05D004251 ORTHO05D005010 3.0e-23 112.1 103 55.3
LjContig00448g0013547 Lotus japonicus HOM05D004251 ORTHO05D005010 3.0e-23 112.1 103 55.3
BcaNung00241 Brassica carinata HOM05D004251 ORTHO05D005010 3.9e-23 111.7 103 55.3
MELO3C016373.2 Cucumis melo HOM05D004251 ORTHO05D005010 5.0e-23 111.3 103 54.4
Solyc02g085250.4 Solanum lycopersicum HOM05D004251 ORTHO05D005010 5.0e-23 111.3 103 59.2
HPP92_017686 Vanilla planifolia HOM05D004251 ORTHO05D005010 5.0e-23 111.3 104 55.8
AL8G23350 Arabidopsis lyrata HOM05D004251 ORTHO05D005010 6.6e-23 110.9 103 54.4
AT5G49555 Arabidopsis thaliana HOM05D004251 ORTHO05D005010 6.6e-23 110.9 103 54.4
arahy.Tifrunner.gnm1.ann1.05783X Arachis hypogaea HOM05D004251 ORTHO05D005010 8.6e-23 110.5 103 58.3
Carub.0008s2797 Capsella rubella HOM05D004251 ORTHO05D005010 8.6e-23 110.5 103 54.4
Nn5g29614 Nelumbo nucifera HOM05D004251 ORTHO05D005010 8.6e-23 110.5 104 56.7
QL06p046194 Quercus lobata HOM05D004251 ORTHO05D005010 8.6e-23 110.5 84 66.7
Eucgr.D01664 Eucalyptus grandis HOM05D004251 ORTHO05D005010 1.1e-22 110.2 86 58.1
Gohir.A02G165600 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.1e-22 110.2 103 56.3
Lj1g0003213 Lotus japonicus HOM05D004251 ORTHO05D005010 1.1e-22 110.2 103 53.4
LjContig00448g0018994 Lotus japonicus HOM05D004251 ORTHO05D005010 1.1e-22 110.2 103 53.4
Lalb_Chr05g0227621 Lupinus albus HOM05D004251 ORTHO05D005010 1.1e-22 110.2 86 60.5
Sp7g14220 Schrenkiella parvula HOM05D004251 ORTHO05D005010 1.1e-22 110.2 103 55.3
Duzib147G0019 Durio zibethinus HOM05D004251 ORTHO05D005010 1.5e-22 109.8 108 52.8
Ca_22268_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.9e-22 109.4 103 55.3
Ca_22281_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.9e-22 109.4 103 55.3
Eucgr.D02612 Eucalyptus grandis HOM05D004251 ORTHO05D005010 1.9e-22 109.4 86 58.1
Gohir.D03G014400 Gossypium hirsutum HOM05D004251 ORTHO05D005010 1.9e-22 109.4 86 62.8
CiPaw.02G018000 Carya illinoinensis HOM05D004251 ORTHO05D005010 2.5e-22 109.0 86 62.8
VMungo0251G3189 Vigna mungo HOM05D004251 ORTHO05D005010 3.3e-22 108.6 86 61.6
Thhalv10024792m.g Eutrema salsugineum HOM05D004251 ORTHO05D005010 4.3e-22 108.2 103 53.4
Zm00001eb232720 Zea mays HOM05D004251 ORTHO05D005010 4.3e-22 108.2 104 56.7
Psat4g093160 Pisum sativum HOM05D004251 ORTHO05D005010 5.6e-22 107.8 103 53.4
Glyma.02G056800 Glycine max HOM05D004251 ORTHO05D005010 7.3e-22 107.5 103 55.3
PSO210G3399 Papaver somniferum HOM05D004251 ORTHO05D005010 7.3e-22 107.5 104 58.7
Ca_12487_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 9.5e-22 107.1 103 55.3
TPR.G18620 Trifolium pratense HOM05D004251 ORTHO05D005010 1.2e-21 106.7 103 55.3
PSO170G5998 Papaver somniferum HOM05D004251 ORTHO05D005010 1.6e-21 106.3 104 57.7
Os12g0631800 Oryza sativa ssp. japonica HOM05D004251 ORTHO05D005010 2.1e-21 105.9 104 54.8
Aqoxy5G01628 Aquilegia oxysepala HOM05D004251 ORTHO05D005010 3.6e-21 105.1 104 54.8
Haze_15087 Corylus avellana HOM05D004251 ORTHO05D005010 3.6e-21 105.1 120 50.0
Medtr1g034450 Medicago truncatula HOM05D004251 ORTHO05D005010 3.6e-21 105.1 103 54.4
Psat4g093040 Pisum sativum HOM05D004251 ORTHO05D005010 6.2e-21 104.4 103 51.5
ATR0733G178 Amborella trichopoda HOM05D004251 ORTHO05D005010 3.1e-20 102.1 104 53.8
Gorai.003G014700 Gossypium raimondii HOM05D004251 ORTHO05D005010 6.8e-20 100.9 103 55.3
Lj2C453G4 Lonicera japonica HOM05D004251 ORTHO05D005010 2.9e-18 95.5 103 53.4
MELO3C007827.2 Cucumis melo HOM05D004251 ORTHO05D005010 1.9e-17 92.8 86 58.1
Cpa.g.sc6.114 Carica papaya HOM05D004251 ORTHO05D005010 9.2e-17 90.5 107 53.3
AUR62007569 Chenopodium quinoa HOM05D004251 ORTHO05D005010 1.2e-16 90.1 62 69.4
Oeu009415.3 Olea europaea HOM05D004251 ORTHO05D005010 2.1e-16 89.4 175 36.6
Potri.007G025300 Populus trichocarpa HOM05D004251 ORTHO05D005010 3.5e-16 88.6 62 69.4
SEGI_19545 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 3.5e-16 88.6 87 54.0
Oeu041447.3 Olea europaea HOM05D004251 ORTHO05D005010 1.3e-15 86.7 62 72.6
arahy.Tifrunner.gnm1.ann1.BIDD64 Arachis hypogaea HOM05D004251 ORTHO05D005010 1.7e-15 86.3 103 51.5
Mapoly0014s0043 Marchantia polymorpha HOM05D004251 ORTHO05D005010 6.6e-15 84.3 105 46.7
PRCOL_00003920 Prasinoderma coloniale HOM05D004251 ORTHO05D005010 2.1e-13 79.3 106 44.3
AagrBONN_evm.TU.Sc2ySwM_228.727 Anthoceros agrestis HOM05D004251 ORTHO05D005010 6.2e-13 77.8 109 45.9
Pp3c15_20190 Physcomitrium patens HOM05D004251 ORTHO05D005010 1.4e-12 76.6 90 43.3
SMO194G0022 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 8.9e-12 73.9 87 51.7
TPR.G24109 Trifolium pratense HOM05D004251 ORTHO05D005010 8.9e-12 73.9 103 45.6
Atru.chr3.575 Acer truncatum HOM05D004251 ORTHO05D005010 2.9e-10 68.9 63 54.0
Oeu056756.2 Olea europaea HOM05D004251 ORTHO05D005010 9.2e-09 63.9 103 41.7
SMO358G0577 Selaginella moellendorffii HOM05D004251 ORTHO05D005010 3.0e-07 58.9 55 52.7
Atru.chr3.576 Acer truncatum HOM05D004251 ORTHO05D005010 6.6e-07 57.8 44 70.5


User provided reference genes

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